version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1971 48.66 0 2276635..2277900 + 421 145599294 - YPDSF_2016 - long-chain fatty acid outer membrane transporter 1972 51.50 0 2278007..2278771 - 254 145599295 - YPDSF_2017 - VacJ lipoprotein 1973 49.55 0 2278807..2280033 - 408 145599296 - YPDSF_2018 - cytochrome c-type biogenesis protein 1974 47.19 0 2280033..2280530 - 165 145599297 - YPDSF_2019 - cytochrome c-type biogenesis protein 1975 49.74 0 2280527..2281093 - 188 145599298 - YPDSF_2020 - thiol:disulfide interchange protein DsbE 1976 52.41 0 2281090..2283060 - 656 145599299 - YPDSF_2021 - cytochrome c-type biogenesis protein 1977 51.11 0 2283057..2283551 - 164 145599300 - YPDSF_2022 - cytochrome c-type biogenesis protein CcmE 1978 51.82 0 2283548..2283850 - 100 145599301 - YPDSF_2023 - heme exporter protein D 1979 50.14 0 2283847..2284584 - 245 145599302 - YPDSF_2024 - heme exporter protein C 1980 52.12 0 2284647..2285306 - 219 145599303 - YPDSF_2025 - heme exporter protein B 1981 49.47 0 2285276..2285932 - 218 145599304 - YPDSF_2026 - cytochrome c biogenesis protein CcmA 1982 35.47 -2 2286377..2286844 - 155 145599305 - YPDSF_2027 - hypothetical protein 1983 43.65 0 2287460..2288002 + 180 145599306 - YPDSF_2028 - hypothetical protein 1984 48.29 0 2287947..2290046 + 699 145599307 - YPDSF_2029 - membrane protein 1985 45.91 0 2290422..2290763 + 113 145599308 - YPDSF_2030 - hypothetical protein 1986 43.99 0 2290838..2291203 - 121 145599309 - YPDSF_2031 - membrane protein 1987 44.79 0 2291210..2291689 - 159 145599310 - YPDSF_2032 - hypothetical protein 1988 45.23 0 2291770..2292576 - 268 145599311 - YPDSF_2033 - hypothetical protein 1989 43.23 -1 2292596..2293444 - 282 145599312 - YPDSF_2034 - hypothetical protein 1990 50.57 0 2293444..2293704 - 86 145599313 - YPDSF_2035 - hypothetical protein 1991 50.04 0 2293803..2296082 - 759 145599314 - YPDSF_2036 - hypothetical protein 1992 48.15 0 2300211..2301047 - 278 145599315 - YPDSF_2039 - OmpA family protein 1993 50.38 0 2301063..2301842 - 259 145599316 - YPDSF_2040 - transposase/IS protein 1994 52.79 0 2301842..2302864 - 340 145599317 - YPDSF_2041 - transposase for insertion sequence IS100 1995 48.58 0 2302878..2303546 - 222 145599318 - YPDSF_2042 - hypothetical protein 1996 47.48 0 2303543..2304892 - 449 145599319 - YPDSF_2043 - hypothetical protein 1997 42.78 -1 2304896..2305456 - 186 145599320 - YPDSF_2044 - hypothetical protein 1998 41.23 -1 2305709..2306278 - 189 145599321 - YPDSF_2045 - hypothetical protein 1999 46.24 0 2306520..2308022 - 500 145599322 - YPDSF_2046 - hypothetical protein 2000 41.71 -1 2308046..2308570 - 174 145599323 - YPDSF_2047 - hypothetical protein 2001 42.20 -1 2308675..2309283 - 202 145599324 - YPDSF_2048 - fimbrial protein 2002 46.26 0 2309268..2310458 - 396 145599325 - YPDSF_2049 - outer membrane fimbrial usher porin 2003 49.63 0 2310483..2311691 + 402 145599326 - YPDSF_2050 - transposase for the IS285 insertion element 2004 45.13 0 2311713..2313263 - 516 145599327 - YPDSF_2051 - hypothetical protein 2005 41.21 -1 2313391..2314152 - 253 145599328 - YPDSF_2052 - pili chaperone protein 2006 44.32 0 2314309..2314854 - 181 145599329 - YPDSF_2053 - frimbrial protein 2007 47.94 0 2315055..2317730 - 891 145599330 - YPDSF_2054 - Clp ATPase 2008 49.71 0 2318513..2320393 + 626 145599331 - YPDSF_2055 - hypothetical protein 2009 54.37 +1 2320393..2321238 + 281 145599332 - YPDSF_2056 - hypothetical protein 2010 49.12 0 2321300..2321413 + 37 145599333 - YPDSF_2057 - hypothetical protein 2011 50.17 0 2321512..2322693 + 393 145599334 - YPDSF_2058 - hypothetical protein 2012 45.35 0 2322700..2323731 + 343 145599335 - YPDSF_2059 - fimbrial protein 2013 47.31 0 2323771..2325108 + 445 145599336 - YPDSF_2060 - hypothetical protein 2014 46.61 0 2325054..2325806 + 250 145599337 - YPDSF_2061 - hypothetical protein 2015 45.45 0 2325807..2327489 + 560 145599338 - YPDSF_2062 - hypothetical protein 2016 40.79 -1 2327486..2327968 + 160 145599339 - YPDSF_2063 - hypothetical protein 2017 35.16 -2 2328326..2328928 - 200 145599340 - YPDSF_2064 - LuxR family regulatory protein 2018 51.78 0 2330190..2331284 - 364 145599341 - YPDSF_2065 - murein hydrolase B 2019 48.82 0 2331613..2332632 + 339 145599342 - YPDSF_2066 - iron(III)-binding periplasmic protein 2020 52.61 0 2332688..2334274 + 528 145599343 - YPDSF_2067 - iron(III)-transport system permease 2021 52.57 0 2334271..2335320 + 349 145599344 - YPDSF_2068 - iron(III)-transport ATP-binding protein 2022 40.89 -1 2335393..2335908 - 171 145599345 - YPDSF_2069 - hypothetical protein 2023 39.92 -1 2336378..2336863 + 161 145599346 - YPDSF_2070 - hypothetical protein 2024 35.69 -2 2337093..2337941 - 282 145599347 - YPDSF_2071 - hypothetical protein 2025 47.26 0 2338772..2341198 + 808 145599348 - YPDSF_2072 - dimethyl sulfoxide reductase chain A protein 2026 50.81 0 2341210..2341827 + 205 145599349 - YPDSF_2073 - dimethyl sulfoxide reductase chain B protein 2027 50.45 0 2341829..2342605 + 258 145599350 - YPDSF_2074 - dimethyl sulfoxide reductase chain C protein 2028 48.74 0 2342963..2343559 + 198 145599351 - YPDSF_2075 - hypothetical protein 2029 52.28 0 2343556..2344125 + 189 145599352 - YPDSF_2076 - iron-sulphur protein 2030 50.08 0 2344371..2345027 - 218 145599353 - YPDSF_2077 - putative lipoprotein 2031 44.28 0 2345024..2345425 - 133 145599354 - YPDSF_2078 - lipoprotein 2032 47.17 0 2345407..2346078 - 223 145599355 - YPDSF_2079 - lipoprotein 2033 50.00 0 2346668..2347099 + 143 145599356 - YPDSF_2080 - hypothetical protein 2034 46.67 0 2347194..2347718 - 174 145599357 - YPDSF_2081 - B-type cytochrome 2035 50.97 0 2347944..2349179 - 411 145599358 - YPDSF_2082 - aminotransferase 2036 50.16 0 2349445..2350692 + 415 145599359 - YPDSF_2083 - hypothetical protein 2037 50.31 0 2350770..2351741 - 323 145599360 glk YPDSF_2084 - glucokinase 2038 48.85 0 2351922..2352398 - 158 145599361 - YPDSF_2085 - hypothetical protein 2039 51.42 0 2352501..2353379 + 292 145599362 - YPDSF_2086 - LysR family transcriptional regulator 2040 48.89 0 2353515..2354504 + 329 145599363 - YPDSF_2087 - ion channel protein 2041 43.72 0 2354675..2355088 + 137 145599364 - YPDSF_2088 - hypothetical protein 2042 48.62 0 2355181..2356410 - 409 145599365 - YPDSF_2089 - manganese transport protein MntH 2043 43.73 0 2356861..2357928 + 355 145599366 - YPDSF_2090 - nucleoside permease 2044 52.87 +1 2357946..2358032 + 28 145599367 - YPDSF_2091 - CNT family H+/nucleoside symporter 2045 49.22 0 2359266..2360681 + 471 145599368 gltX YPDSF_2092 - glutamyl-tRNA synthetase 2046 45.97 0 2361169..2361627 + 152 145599369 - YPDSF_2093 - transposase for the IS1541 insertion element 2047 44.72 0 2361894..2362499 + 201 145599370 - YPDSF_2094 - hypothetical protein 2048 44.25 0 2362631..2362978 + 115 145599371 - YPDSF_2095 - hypothetical protein 2049 45.83 0 2363079..2363294 - 71 145599372 - YPDSF_2096 - hypothetical protein 2050 51.07 0 2363314..2365326 - 670 145599373 ligA YPDSF_2097 - NAD-dependent DNA ligase LigA 2051 49.24 0 2365417..2366403 - 328 145599374 - YPDSF_2098 - cell division protein ZipA 2052 47.89 0 2366652..2367386 + 244 145599375 - YPDSF_2099 - putative sulfate transport protein CysZ 2053 49.95 0 2367543..2368511 + 322 145599376 - YPDSF_2100 - cysteine synthase A 2054 45.74 0 2369010..2369267 + 85 145599377 - YPDSF_2101 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2055 46.93 0 2369316..2371043 + 575 145599378 - YPDSF_2102 - phosphoenolpyruvate-protein phosphotransferase 2056 43.33 0 2371092..2371601 + 169 145599379 - YPDSF_2103 - glucose-specific PTS system component 2057 45.75 0 2371744..2372202 - 152 145599380 - YPDSF_2104 - transposase for the IS1541 insertion element 2058 49.19 0 2372472..2373821 - 449 145599381 - YPDSF_2105 - two-component system sensor kinase 2059 47.51 0 2373847..2374530 - 227 145599382 - YPDSF_2106 - two-component system response regulator 2060 49.83 0 2374718..2375923 + 401 145599383 - YPDSF_2107 - HlyD family secretion protein 2061 50.02 0 2375927..2377963 + 678 145599384 - YPDSF_2108 - ABC transporter, ATP-binding protein 2062 42.38 -1 2378218..2379864 - 548 145599385 - YPDSF_2109 - pyridine nucleotide-disulphide oxidoreductase 2063 39.36 -1 2379924..2381384 - 486 145599386 - YPDSF_2110 - permease 2064 39.15 -1 2381721..2382752 - 343 145599387 - YPDSF_2111 - peptidase 2065 36.46 -2 2382749..2382940 - 63 145599388 - YPDSF_2112 - hypothetical protein 2066 39.42 -1 2382974..2384155 - 393 145599389 - YPDSF_2113 - aminotransferase 2067 47.15 0 2384855..2386273 + 472 145599390 - YPDSF_2114 - hypothetical protein 2068 49.71 0 2386506..2388050 + 514 145599391 - YPDSF_2115 - two-component sensor histidine kinase 2069 51.41 0 2388047..2388754 + 235 145599392 - YPDSF_2116 - two-component response regulator 2070 33.17 -2 2389135..2390367 - 410 145599393 - YPDSF_2117 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.