version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1949 45.85 0 2251322..2251984 - 220 145599272 - YPDSF_1994 - hypothetical protein 1950 50.91 0 2252141..2253022 - 293 145599273 truA YPDSF_1995 - tRNA pseudouridine synthase A 1951 53.31 +1 2253022..2254032 - 336 145599274 - YPDSF_1996 - putative semialdehyde dehydrogenase 1952 53.70 +1 2254202..2255389 - 395 145599275 - YPDSF_1997 - erythronate-4-phosphate dehydrogenase 1953 48.85 0 2255376..2256161 - 261 145599276 - YPDSF_1998 - AraC family transcription regulator 1954 49.46 0 2256387..2257304 + 305 145599277 - YPDSF_1999 - hypothetical protein 1955 50.29 0 2257589..2258626 + 345 145599278 - YPDSF_2000 - flagella biosynthesis regulator 1956 46.33 0 2258968..2259498 - 176 145599279 - YPDSF_2001 - mannose-resistant/Proteus-like fimbrial protein 1957 46.98 0 2260286..2260981 + 231 145599280 - YPDSF_2002 - aspartate/glutamate racemase 1958 49.51 0 2261389..2262612 - 407 145599281 - YPDSF_2003 - 3-oxoacyl-(acyl carrier protein) synthase I 1959 53.19 +1 2262784..2264853 + 689 145599282 mnmC YPDSF_2004 - 5-methylaminomethyl-2-thiouridine methyltransferase 1960 51.97 0 2265031..2265309 - 92 145599283 - YPDSF_2005 - hypothetical protein 1961 47.70 0 2265367..2265909 - 180 145599284 - YPDSF_2006 - hypothetical protein 1962 51.80 0 2266009..2266815 - 268 145599285 - YPDSF_2007 - hypothetical protein 1963 53.49 +1 2266819..2267607 - 262 145599286 mepA YPDSF_2008 - penicillin-insensitive murein endopeptidase 1964 52.21 0 2267652..2268737 - 361 145599287 - YPDSF_2009 - chorismate synthase 1965 48.87 0 2268814..2269746 - 310 145599288 - YPDSF_2010 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1966 45.10 0 2270035..2270646 + 203 145599289 - YPDSF_2011 - hypothetical protein 1967 51.22 0 2270944..2271435 - 163 145599290 - YPDSF_2012 - phosphohistidine phosphatase 1968 50.19 0 2272004..2274328 - 774 145599291 fadJ YPDSF_2013 - multifunctional fatty acid oxidation complex subunit alpha 1969 53.17 +1 2274328..2275638 - 436 145599292 fadI YPDSF_2014 - 3-ketoacyl-CoA thiolase 1970 47.47 0 2275925..2276221 - 98 145599293 - YPDSF_2015 - hypothetical protein 1971 48.66 0 2276635..2277900 + 421 145599294 - YPDSF_2016 - long-chain fatty acid outer membrane transporter 1972 51.50 0 2278007..2278771 - 254 145599295 - YPDSF_2017 - VacJ lipoprotein 1973 49.55 0 2278807..2280033 - 408 145599296 - YPDSF_2018 - cytochrome c-type biogenesis protein 1974 47.19 0 2280033..2280530 - 165 145599297 - YPDSF_2019 - cytochrome c-type biogenesis protein 1975 49.74 0 2280527..2281093 - 188 145599298 - YPDSF_2020 - thiol:disulfide interchange protein DsbE 1976 52.41 0 2281090..2283060 - 656 145599299 - YPDSF_2021 - cytochrome c-type biogenesis protein 1977 51.11 0 2283057..2283551 - 164 145599300 - YPDSF_2022 - cytochrome c-type biogenesis protein CcmE 1978 51.82 0 2283548..2283850 - 100 145599301 - YPDSF_2023 - heme exporter protein D 1979 50.14 0 2283847..2284584 - 245 145599302 - YPDSF_2024 - heme exporter protein C 1980 52.12 0 2284647..2285306 - 219 145599303 - YPDSF_2025 - heme exporter protein B 1981 49.47 0 2285276..2285932 - 218 145599304 - YPDSF_2026 - cytochrome c biogenesis protein CcmA 1982 35.47 -2 2286377..2286844 - 155 145599305 - YPDSF_2027 - hypothetical protein 1983 43.65 0 2287460..2288002 + 180 145599306 - YPDSF_2028 - hypothetical protein 1984 48.29 0 2287947..2290046 + 699 145599307 - YPDSF_2029 - membrane protein 1985 45.91 0 2290422..2290763 + 113 145599308 - YPDSF_2030 - hypothetical protein 1986 43.99 0 2290838..2291203 - 121 145599309 - YPDSF_2031 - membrane protein 1987 44.79 0 2291210..2291689 - 159 145599310 - YPDSF_2032 - hypothetical protein 1988 45.23 0 2291770..2292576 - 268 145599311 - YPDSF_2033 - hypothetical protein 1989 43.23 -1 2292596..2293444 - 282 145599312 - YPDSF_2034 - hypothetical protein 1990 50.57 0 2293444..2293704 - 86 145599313 - YPDSF_2035 - hypothetical protein 1991 50.04 0 2293803..2296082 - 759 145599314 - YPDSF_2036 - hypothetical protein 1992 48.15 0 2300211..2301047 - 278 145599315 - YPDSF_2039 - OmpA family protein 1993 50.38 0 2301063..2301842 - 259 145599316 - YPDSF_2040 - transposase/IS protein 1994 52.79 0 2301842..2302864 - 340 145599317 - YPDSF_2041 - transposase for insertion sequence IS100 1995 48.58 0 2302878..2303546 - 222 145599318 - YPDSF_2042 - hypothetical protein 1996 47.48 0 2303543..2304892 - 449 145599319 - YPDSF_2043 - hypothetical protein 1997 42.78 -1 2304896..2305456 - 186 145599320 - YPDSF_2044 - hypothetical protein 1998 41.23 -1 2305709..2306278 - 189 145599321 - YPDSF_2045 - hypothetical protein 1999 46.24 0 2306520..2308022 - 500 145599322 - YPDSF_2046 - hypothetical protein 2000 41.71 -1 2308046..2308570 - 174 145599323 - YPDSF_2047 - hypothetical protein 2001 42.20 -1 2308675..2309283 - 202 145599324 - YPDSF_2048 - fimbrial protein 2002 46.26 0 2309268..2310458 - 396 145599325 - YPDSF_2049 - outer membrane fimbrial usher porin 2003 49.63 0 2310483..2311691 + 402 145599326 - YPDSF_2050 - transposase for the IS285 insertion element 2004 45.13 0 2311713..2313263 - 516 145599327 - YPDSF_2051 - hypothetical protein 2005 41.21 -1 2313391..2314152 - 253 145599328 - YPDSF_2052 - pili chaperone protein 2006 44.32 0 2314309..2314854 - 181 145599329 - YPDSF_2053 - frimbrial protein 2007 47.94 0 2315055..2317730 - 891 145599330 - YPDSF_2054 - Clp ATPase 2008 49.71 0 2318513..2320393 + 626 145599331 - YPDSF_2055 - hypothetical protein 2009 54.37 +1 2320393..2321238 + 281 145599332 - YPDSF_2056 - hypothetical protein 2010 49.12 0 2321300..2321413 + 37 145599333 - YPDSF_2057 - hypothetical protein 2011 50.17 0 2321512..2322693 + 393 145599334 - YPDSF_2058 - hypothetical protein 2012 45.35 0 2322700..2323731 + 343 145599335 - YPDSF_2059 - fimbrial protein 2013 47.31 0 2323771..2325108 + 445 145599336 - YPDSF_2060 - hypothetical protein 2014 46.61 0 2325054..2325806 + 250 145599337 - YPDSF_2061 - hypothetical protein 2015 45.45 0 2325807..2327489 + 560 145599338 - YPDSF_2062 - hypothetical protein 2016 40.79 -1 2327486..2327968 + 160 145599339 - YPDSF_2063 - hypothetical protein 2017 35.16 -2 2328326..2328928 - 200 145599340 - YPDSF_2064 - LuxR family regulatory protein 2018 51.78 0 2330190..2331284 - 364 145599341 - YPDSF_2065 - murein hydrolase B 2019 48.82 0 2331613..2332632 + 339 145599342 - YPDSF_2066 - iron(III)-binding periplasmic protein 2020 52.61 0 2332688..2334274 + 528 145599343 - YPDSF_2067 - iron(III)-transport system permease 2021 52.57 0 2334271..2335320 + 349 145599344 - YPDSF_2068 - iron(III)-transport ATP-binding protein 2022 40.89 -1 2335393..2335908 - 171 145599345 - YPDSF_2069 - hypothetical protein 2023 39.92 -1 2336378..2336863 + 161 145599346 - YPDSF_2070 - hypothetical protein 2024 35.69 -2 2337093..2337941 - 282 145599347 - YPDSF_2071 - hypothetical protein 2025 47.26 0 2338772..2341198 + 808 145599348 - YPDSF_2072 - dimethyl sulfoxide reductase chain A protein 2026 50.81 0 2341210..2341827 + 205 145599349 - YPDSF_2073 - dimethyl sulfoxide reductase chain B protein 2027 50.45 0 2341829..2342605 + 258 145599350 - YPDSF_2074 - dimethyl sulfoxide reductase chain C protein 2028 48.74 0 2342963..2343559 + 198 145599351 - YPDSF_2075 - hypothetical protein 2029 52.28 0 2343556..2344125 + 189 145599352 - YPDSF_2076 - iron-sulphur protein 2030 50.08 0 2344371..2345027 - 218 145599353 - YPDSF_2077 - putative lipoprotein 2031 44.28 0 2345024..2345425 - 133 145599354 - YPDSF_2078 - lipoprotein 2032 47.17 0 2345407..2346078 - 223 145599355 - YPDSF_2079 - lipoprotein 2033 50.00 0 2346668..2347099 + 143 145599356 - YPDSF_2080 - hypothetical protein 2034 46.67 0 2347194..2347718 - 174 145599357 - YPDSF_2081 - B-type cytochrome 2035 50.97 0 2347944..2349179 - 411 145599358 - YPDSF_2082 - aminotransferase 2036 50.16 0 2349445..2350692 + 415 145599359 - YPDSF_2083 - hypothetical protein 2037 50.31 0 2350770..2351741 - 323 145599360 glk YPDSF_2084 - glucokinase 2038 48.85 0 2351922..2352398 - 158 145599361 - YPDSF_2085 - hypothetical protein 2039 51.42 0 2352501..2353379 + 292 145599362 - YPDSF_2086 - LysR family transcriptional regulator 2040 48.89 0 2353515..2354504 + 329 145599363 - YPDSF_2087 - ion channel protein 2041 43.72 0 2354675..2355088 + 137 145599364 - YPDSF_2088 - hypothetical protein 2042 48.62 0 2355181..2356410 - 409 145599365 - YPDSF_2089 - manganese transport protein MntH 2043 43.73 0 2356861..2357928 + 355 145599366 - YPDSF_2090 - nucleoside permease 2044 52.87 +1 2357946..2358032 + 28 145599367 - YPDSF_2091 - CNT family H+/nucleoside symporter 2045 49.22 0 2359266..2360681 + 471 145599368 gltX YPDSF_2092 - glutamyl-tRNA synthetase 2046 45.97 0 2361169..2361627 + 152 145599369 - YPDSF_2093 - transposase for the IS1541 insertion element 2047 44.72 0 2361894..2362499 + 201 145599370 - YPDSF_2094 - hypothetical protein 2048 44.25 0 2362631..2362978 + 115 145599371 - YPDSF_2095 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.