version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1910 53.83 +1 2205299..2206762 - 487 145599233 - YPDSF_1953 - NADH dehydrogenase subunit N 1911 51.40 0 2206769..2208301 - 510 145599234 - YPDSF_1954 - NADH dehydrogenase subunit M 1912 54.20 +1 2208341..2210185 - 614 145599235 - YPDSF_1955 - NADH dehydrogenase subunit L 1913 55.12 +1 2210182..2210484 - 100 145599236 - YPDSF_1956 - NADH dehydrogenase subunit K 1914 51.65 0 2210481..2211026 - 181 145599237 - YPDSF_1957 - NADH dehydrogenase subunit J 1915 51.75 0 2211039..2211581 - 180 145599238 - YPDSF_1958 - NADH dehydrogenase subunit I 1916 51.64 0 2211596..2212573 - 325 145599239 - YPDSF_1959 - NADH dehydrogenase subunit H 1917 54.21 +1 2212570..2215314 - 914 145599240 - YPDSF_1960 - NADH dehydrogenase subunit G 1918 53.90 +1 2215401..2216786 - 461 145599241 - YPDSF_1961 - NADH dehydrogenase I subunit F 1919 54.08 +1 2216783..2217346 - 187 145599242 - YPDSF_1962 - NADH dehydrogenase subunit E 1920 51.47 0 2217349..2219145 - 598 145599243 - YPDSF_1963 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1921 50.29 0 2219286..2219963 - 225 145599244 - YPDSF_1964 - NADH dehydrogenase subunit B 1922 49.90 0 2220065..2220565 - 166 145599245 - YPDSF_1965 - NADH dehydrogenase subunit A 1923 46.84 0 2221244..2222176 - 310 145599246 - YPDSF_1966 - LysR family transcriptional regulator 1924 49.05 0 2223031..2224245 + 404 145599247 - YPDSF_1967 - aminotransferase AlaT 1925 43.94 0 2224396..2224989 + 197 145599248 - YPDSF_1968 - hypothetical protein 1926 50.24 0 2225332..2227224 - 630 145599249 - YPDSF_1969 - ion transport protein 1927 52.21 0 2227456..2228112 - 218 145599250 - YPDSF_1970 - putative phosphatase 1928 46.46 0 2228277..2228771 - 164 145599251 - YPDSF_1971 - hypothetical protein 1929 52.19 0 2229069..2229524 - 151 145599252 - YPDSF_1972 - hypothetical protein 1930 50.46 0 2229946..2231148 + 400 145599253 - YPDSF_1973 - acetate kinase 1931 52.69 0 2231316..2233469 + 717 145599254 - YPDSF_1974 - phosphate acetyltransferase 1932 48.02 0 2233735..2234769 - 344 145599255 - YPDSF_1975 - LacI family transcriptional regulator 1933 47.75 0 2235083..2235526 + 147 145599256 - YPDSF_1976 - phosphotransferase enzyme II, A component 1934 43.06 -1 2235695..2235982 + 95 145599257 - YPDSF_1977 - hypothetical protein 1935 48.21 0 2235995..2237251 + 418 145599258 ulaA YPDSF_1978 - ascorbate-specific PTS system enzyme IIC 1936 51.73 0 2237368..2237916 - 182 145599259 - YPDSF_1979 - hypothetical protein 1937 39.68 -1 2238914..2239606 - 230 145599260 - YPDSF_1982 - hypothetical protein 1938 53.69 +1 2239960..2240868 + 302 145599261 - YPDSF_1983 - hypothetical protein 1939 46.12 0 2240992..2241789 - 265 145599262 - YPDSF_1984 - histidine/lysine/arginine/ornithine transporter subunit 1940 45.89 0 2241803..2242519 - 238 145599263 - YPDSF_1985 - histidine transport system permease protein HisM 1941 49.49 0 2242516..2243202 - 228 145599264 - YPDSF_1986 - histidine transport system permease protein HisQ 1942 44.06 0 2243305..2244087 - 260 145599265 - YPDSF_1987 - histidine-binding periplasmic protein 1943 46.77 0 2244612..2245184 - 190 145599266 - YPDSF_1988 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1944 47.43 0 2245431..2246948 - 505 145599267 - YPDSF_1989 - amidophosphoribosyltransferase 1945 44.71 0 2246961..2247470 - 169 145599268 - YPDSF_1990 - colicin V production protein 1946 51.31 0 2247782..2248504 - 240 145599269 - YPDSF_1991 - hypothetical protein 1947 53.10 +1 2248624..2249928 - 434 145599270 - YPDSF_1992 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1948 49.62 0 2250177..2251091 - 304 145599271 - YPDSF_1993 - acetyl-CoA carboxylase subunit beta 1949 45.85 0 2251322..2251984 - 220 145599272 - YPDSF_1994 - hypothetical protein 1950 50.91 0 2252141..2253022 - 293 145599273 truA YPDSF_1995 - tRNA pseudouridine synthase A 1951 53.31 +1 2253022..2254032 - 336 145599274 - YPDSF_1996 - putative semialdehyde dehydrogenase 1952 53.70 +1 2254202..2255389 - 395 145599275 - YPDSF_1997 - erythronate-4-phosphate dehydrogenase 1953 48.85 0 2255376..2256161 - 261 145599276 - YPDSF_1998 - AraC family transcription regulator 1954 49.46 0 2256387..2257304 + 305 145599277 - YPDSF_1999 - hypothetical protein 1955 50.29 0 2257589..2258626 + 345 145599278 - YPDSF_2000 - flagella biosynthesis regulator 1956 46.33 0 2258968..2259498 - 176 145599279 - YPDSF_2001 - mannose-resistant/Proteus-like fimbrial protein 1957 46.98 0 2260286..2260981 + 231 145599280 - YPDSF_2002 - aspartate/glutamate racemase 1958 49.51 0 2261389..2262612 - 407 145599281 - YPDSF_2003 - 3-oxoacyl-(acyl carrier protein) synthase I 1959 53.19 +1 2262784..2264853 + 689 145599282 mnmC YPDSF_2004 - 5-methylaminomethyl-2-thiouridine methyltransferase 1960 51.97 0 2265031..2265309 - 92 145599283 - YPDSF_2005 - hypothetical protein 1961 47.70 0 2265367..2265909 - 180 145599284 - YPDSF_2006 - hypothetical protein 1962 51.80 0 2266009..2266815 - 268 145599285 - YPDSF_2007 - hypothetical protein 1963 53.49 +1 2266819..2267607 - 262 145599286 mepA YPDSF_2008 - penicillin-insensitive murein endopeptidase 1964 52.21 0 2267652..2268737 - 361 145599287 - YPDSF_2009 - chorismate synthase 1965 48.87 0 2268814..2269746 - 310 145599288 - YPDSF_2010 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1966 45.10 0 2270035..2270646 + 203 145599289 - YPDSF_2011 - hypothetical protein 1967 51.22 0 2270944..2271435 - 163 145599290 - YPDSF_2012 - phosphohistidine phosphatase 1968 50.19 0 2272004..2274328 - 774 145599291 fadJ YPDSF_2013 - multifunctional fatty acid oxidation complex subunit alpha 1969 53.17 +1 2274328..2275638 - 436 145599292 fadI YPDSF_2014 - 3-ketoacyl-CoA thiolase 1970 47.47 0 2275925..2276221 - 98 145599293 - YPDSF_2015 - hypothetical protein 1971 48.66 0 2276635..2277900 + 421 145599294 - YPDSF_2016 - long-chain fatty acid outer membrane transporter 1972 51.50 0 2278007..2278771 - 254 145599295 - YPDSF_2017 - VacJ lipoprotein 1973 49.55 0 2278807..2280033 - 408 145599296 - YPDSF_2018 - cytochrome c-type biogenesis protein 1974 47.19 0 2280033..2280530 - 165 145599297 - YPDSF_2019 - cytochrome c-type biogenesis protein 1975 49.74 0 2280527..2281093 - 188 145599298 - YPDSF_2020 - thiol:disulfide interchange protein DsbE 1976 52.41 0 2281090..2283060 - 656 145599299 - YPDSF_2021 - cytochrome c-type biogenesis protein 1977 51.11 0 2283057..2283551 - 164 145599300 - YPDSF_2022 - cytochrome c-type biogenesis protein CcmE 1978 51.82 0 2283548..2283850 - 100 145599301 - YPDSF_2023 - heme exporter protein D 1979 50.14 0 2283847..2284584 - 245 145599302 - YPDSF_2024 - heme exporter protein C 1980 52.12 0 2284647..2285306 - 219 145599303 - YPDSF_2025 - heme exporter protein B 1981 49.47 0 2285276..2285932 - 218 145599304 - YPDSF_2026 - cytochrome c biogenesis protein CcmA 1982 35.47 -2 2286377..2286844 - 155 145599305 - YPDSF_2027 - hypothetical protein 1983 43.65 0 2287460..2288002 + 180 145599306 - YPDSF_2028 - hypothetical protein 1984 48.29 0 2287947..2290046 + 699 145599307 - YPDSF_2029 - membrane protein 1985 45.91 0 2290422..2290763 + 113 145599308 - YPDSF_2030 - hypothetical protein 1986 43.99 0 2290838..2291203 - 121 145599309 - YPDSF_2031 - membrane protein 1987 44.79 0 2291210..2291689 - 159 145599310 - YPDSF_2032 - hypothetical protein 1988 45.23 0 2291770..2292576 - 268 145599311 - YPDSF_2033 - hypothetical protein 1989 43.23 -1 2292596..2293444 - 282 145599312 - YPDSF_2034 - hypothetical protein 1990 50.57 0 2293444..2293704 - 86 145599313 - YPDSF_2035 - hypothetical protein 1991 50.04 0 2293803..2296082 - 759 145599314 - YPDSF_2036 - hypothetical protein 1992 48.15 0 2300211..2301047 - 278 145599315 - YPDSF_2039 - OmpA family protein 1993 50.38 0 2301063..2301842 - 259 145599316 - YPDSF_2040 - transposase/IS protein 1994 52.79 0 2301842..2302864 - 340 145599317 - YPDSF_2041 - transposase for insertion sequence IS100 1995 48.58 0 2302878..2303546 - 222 145599318 - YPDSF_2042 - hypothetical protein 1996 47.48 0 2303543..2304892 - 449 145599319 - YPDSF_2043 - hypothetical protein 1997 42.78 -1 2304896..2305456 - 186 145599320 - YPDSF_2044 - hypothetical protein 1998 41.23 -1 2305709..2306278 - 189 145599321 - YPDSF_2045 - hypothetical protein 1999 46.24 0 2306520..2308022 - 500 145599322 - YPDSF_2046 - hypothetical protein 2000 41.71 -1 2308046..2308570 - 174 145599323 - YPDSF_2047 - hypothetical protein 2001 42.20 -1 2308675..2309283 - 202 145599324 - YPDSF_2048 - fimbrial protein 2002 46.26 0 2309268..2310458 - 396 145599325 - YPDSF_2049 - outer membrane fimbrial usher porin 2003 49.63 0 2310483..2311691 + 402 145599326 - YPDSF_2050 - transposase for the IS285 insertion element 2004 45.13 0 2311713..2313263 - 516 145599327 - YPDSF_2051 - hypothetical protein 2005 41.21 -1 2313391..2314152 - 253 145599328 - YPDSF_2052 - pili chaperone protein 2006 44.32 0 2314309..2314854 - 181 145599329 - YPDSF_2053 - frimbrial protein 2007 47.94 0 2315055..2317730 - 891 145599330 - YPDSF_2054 - Clp ATPase 2008 49.71 0 2318513..2320393 + 626 145599331 - YPDSF_2055 - hypothetical protein 2009 54.37 +1 2320393..2321238 + 281 145599332 - YPDSF_2056 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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