version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1829 44.40 0 2105317..2105994 - 225 145599152 - YPDSF_1870 - hypothetical protein 1830 36.90 -2 2106425..2107069 + 214 145599153 - YPDSF_1871 - N-acylhomoserine lactone synthase YpeI 1831 33.33 -2 2107062..2107799 - 245 145599154 - YPDSF_1872 - quorum-sensing transcriptional activator YpeR 1832 50.38 0 2108286..2109212 - 308 145599155 - YPDSF_1873 - LysR family transcriptional regulator 1833 47.90 0 2109660..2111018 + 452 145599156 - YPDSF_1874 - transporter protein 1834 51.19 0 2111065..2111568 + 167 145599157 - YPDSF_1875 - hypothetical protein 1835 47.16 0 2111579..2112598 + 339 145599158 - YPDSF_1876 - oxidoreductase 1836 50.63 0 2112676..2113230 - 184 145599159 - YPDSF_1877 - hypothetical protein 1837 48.26 0 2113241..2114245 - 334 145599160 - YPDSF_1878 - hypothetical protein 1838 51.21 0 2114263..2115213 - 316 145599161 - YPDSF_1879 - hypothetical protein 1839 44.84 0 2115210..2116556 - 448 145599162 - YPDSF_1880 - hypothetical protein 1840 48.60 0 2116965..2120252 - 1095 145599163 - YPDSF_1881 - hypothetical protein 1841 47.81 0 2120249..2121229 - 326 145599164 - YPDSF_1882 - hypothetical protein 1842 50.36 0 2122316..2123560 + 414 145599165 - YPDSF_1883 - membrane protein 1843 46.04 0 2124173..2125447 - 424 145599166 - YPDSF_1884 - hypothetical protein 1844 43.05 -1 2125486..2126607 - 373 145599167 - YPDSF_1885 - hypothetical protein 1845 48.99 0 2126724..2127662 - 312 145599168 - YPDSF_1886 - hypothetical protein 1846 51.80 0 2127689..2128744 - 351 145599169 - YPDSF_1887 - hypothetical protein 1847 41.33 -1 2128891..2129715 - 274 145599170 - YPDSF_1888 - sugar ABC transporter, permease protein 1848 41.21 -1 2129716..2130591 - 291 145599171 - YPDSF_1889 - sugar ABC transporter, permease protein 1849 45.61 0 2130700..2131986 - 428 145599172 - YPDSF_1890 - solute-binding protein 1850 46.49 0 2132258..2133298 + 346 145599173 - YPDSF_1891 - LacI family transcriptional regulator 1851 46.29 0 2133315..2134703 + 462 145599174 - YPDSF_1892 - phosphomannomutase 1852 44.72 0 2134803..2135882 + 359 145599175 - YPDSF_1893 - mannitol transport ATP-binding protein 1853 47.62 0 2136010..2136135 - 41 145599176 - YPDSF_1894 - hypothetical protein 1854 39.74 -1 2136147..2136677 - 176 145599177 - YPDSF_1895 - hypothetical protein 1855 47.59 0 2136950..2137447 - 165 145599178 - YPDSF_1896 - hypothetical protein 1856 38.69 -1 2138048..2138215 - 55 145599179 - YPDSF_1897 - hypothetical protein 1857 33.84 -2 2138418..2138615 - 65 145599180 - YPDSF_1898 - hypothetical protein 1858 51.72 0 2138625..2140658 - 677 145599181 - YPDSF_1899 - hypothetical protein 1859 48.41 0 2141322..2141573 - 83 145599182 - YPDSF_1900 - hypothetical protein 1860 32.16 -2 2141818..2142327 - 169 145599183 - YPDSF_1901 - hypothetical protein 1861 57.47 +1 2142329..2149876 - 2515 145599184 - YPDSF_1902 - hemolysin 1862 53.94 +1 2150080..2151768 - 562 145599185 - YPDSF_1903 - hemolysin activator protein 1863 46.79 0 2152421..2153386 - 321 145599186 - YPDSF_1904 - dioxygenase beta subunit 1864 47.29 0 2153482..2154606 - 374 145599187 - YPDSF_1905 - dioxygenase alpha subunit 1865 49.12 0 2154723..2156204 - 493 162202301 - YPDSF_1906 - putative transporter 1866 49.64 0 2156986..2158083 - 365 145599189 - YPDSF_1907 - tartrate dehydrogenase 1867 52.23 0 2158174..2159115 + 313 145599190 - YPDSF_1908 - LlysR family transcriptional regulatory protein 1868 40.50 -1 2159362..2160366 + 334 145599191 - YPDSF_1909 - LacI family transcriptional regulator 1869 51.66 0 2160499..2161491 - 330 145599192 - YPDSF_1910 - sugar transport system, permease protein 1870 46.30 0 2163019..2163936 - 305 145599193 - YPDSF_1913 - sugar binding protein precursor 1871 47.03 0 2164111..2165337 - 408 145599194 - YPDSF_1914 - zinc-binding dehydrogenase 1872 32.23 -2 2165920..2166642 - 240 145599195 - YPDSF_1915 - hypothetical protein 1873 38.86 -1 2166784..2167326 - 180 145599196 - YPDSF_1916 - hypothetical protein 1874 46.22 0 2167564..2168502 - 312 145599197 - YPDSF_1917 - membrane protein 1875 48.38 0 2168818..2169342 - 174 145599198 ompX YPDSF_1918 - outer membrane protein X 1876 50.68 0 2169747..2170634 + 295 145599199 - YPDSF_1919 - threonine and homoserine efflux system 1877 52.41 0 2170650..2171147 + 165 145599200 - YPDSF_1920 - hypothetical protein 1878 52.77 0 2171170..2171946 + 258 145599201 - YPDSF_1921 - trans-aconitate 2-methyltransferase 1879 45.44 0 2172203..2172706 + 167 145599202 - YPDSF_1922 - DNA starvation/stationary phase protection protein Dps 1880 41.67 -1 2173026..2174153 + 375 145599203 - YPDSF_1923 - hypothetical protein 1881 46.10 0 2174723..2175466 + 247 145599204 glnH YPDSF_1924 - glutamine ABC transporter periplasmic protein 1882 52.05 0 2175501..2176157 + 218 145599205 glnP YPDSF_1925 - glutamine ABC transporter permease protein 1883 49.75 0 2176067..2176876 + 269 145599206 glnQ YPDSF_1926 - glutamine ABC transporter ATP-binding protein 1884 47.95 0 2177100..2178392 - 430 145599207 - YPDSF_1927 - chemotactic transducer 1885 17.65 -2 2178878..2178979 + 33 145599208 - YPDSF_1928 - hypothetical protein 1886 49.36 0 2179161..2180171 - 336 145599209 - YPDSF_1929 - putative SAM-dependent methyltransferase 1887 45.59 0 2180459..2180719 + 86 145599210 - YPDSF_1930 - hypothetical protein 1888 38.89 -1 2180724..2180867 - 47 145599211 - YPDSF_1931 - hypothetical protein 1889 51.46 0 2181100..2182059 - 319 145599212 - YPDSF_1932 - hypothetical protein 1890 57.70 +2 2182125..2183540 - 471 145599213 - YPDSF_1933 - O-succinylbenzoic acid--CoA ligase 1891 57.00 +1 2183528..2184499 - 323 145599214 - YPDSF_1934 - O-succinylbenzoate synthase 1892 51.98 0 2184499..2185356 - 285 145599215 - YPDSF_1935 - naphthoate synthase 1893 54.46 +1 2185370..2186188 - 272 145599216 - YPDSF_1936 - acyl-CoA thioester hydrolase YfbB 1894 56.87 +1 2186185..2187888 - 567 145599217 - YPDSF_1937 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase 1895 51.31 0 2188116..2189489 - 457 145599218 - YPDSF_1938 - menaquinone-specific isochorismate synthase 1896 45.74 0 2190011..2190655 - 214 145599219 - YPDSF_1939 - hypothetical protein 1897 47.90 0 2191210..2191518 - 102 145599220 - YPDSF_1940 - hypothetical protein 1898 35.12 -2 2191702..2191869 + 55 145599221 - YPDSF_1941 - hypothetical protein 1899 33.33 -2 2192043..2192225 + 60 145599222 - YPDSF_1942 - hypothetical protein 1900 53.24 +1 2192444..2194312 - 622 145599223 - YPDSF_1943 - phosphogluconate dehydratase 1901 51.94 0 2194322..2194837 - 171 145599224 - YPDSF_1944 - hypothetical protein 1902 49.96 0 2194867..2196183 - 438 145599225 - YPDSF_1945 - sugar transporter 1903 48.05 0 2196729..2197679 - 316 145599226 - YPDSF_1946 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 1904 47.03 0 2198145..2199137 - 330 145599227 - YPDSF_1947 - LacI family transcriptional regulator 1905 51.25 0 2199606..2200889 + 427 145599228 - YPDSF_1948 - putative lipoprotein 1906 44.14 0 2201543..2202412 + 289 145599229 - YPDSF_1949 - gluconate 5-dehydrogenase 1907 50.84 0 2202461..2202997 + 178 145599230 - YPDSF_1950 - thermosensitive gluconokinase 1908 49.36 0 2203075..2203542 + 155 145599231 - YPDSF_1951 - hypothetical protein 1909 35.68 -2 2203873..2205063 - 396 145599232 - YPDSF_1952 - hypothetical protein 1910 53.83 +1 2205299..2206762 - 487 145599233 - YPDSF_1953 - NADH dehydrogenase subunit N 1911 51.40 0 2206769..2208301 - 510 145599234 - YPDSF_1954 - NADH dehydrogenase subunit M 1912 54.20 +1 2208341..2210185 - 614 145599235 - YPDSF_1955 - NADH dehydrogenase subunit L 1913 55.12 +1 2210182..2210484 - 100 145599236 - YPDSF_1956 - NADH dehydrogenase subunit K 1914 51.65 0 2210481..2211026 - 181 145599237 - YPDSF_1957 - NADH dehydrogenase subunit J 1915 51.75 0 2211039..2211581 - 180 145599238 - YPDSF_1958 - NADH dehydrogenase subunit I 1916 51.64 0 2211596..2212573 - 325 145599239 - YPDSF_1959 - NADH dehydrogenase subunit H 1917 54.21 +1 2212570..2215314 - 914 145599240 - YPDSF_1960 - NADH dehydrogenase subunit G 1918 53.90 +1 2215401..2216786 - 461 145599241 - YPDSF_1961 - NADH dehydrogenase I subunit F 1919 54.08 +1 2216783..2217346 - 187 145599242 - YPDSF_1962 - NADH dehydrogenase subunit E 1920 51.47 0 2217349..2219145 - 598 145599243 - YPDSF_1963 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 1921 50.29 0 2219286..2219963 - 225 145599244 - YPDSF_1964 - NADH dehydrogenase subunit B 1922 49.90 0 2220065..2220565 - 166 145599245 - YPDSF_1965 - NADH dehydrogenase subunit A 1923 46.84 0 2221244..2222176 - 310 145599246 - YPDSF_1966 - LysR family transcriptional regulator 1924 49.05 0 2223031..2224245 + 404 145599247 - YPDSF_1967 - aminotransferase AlaT 1925 43.94 0 2224396..2224989 + 197 145599248 - YPDSF_1968 - hypothetical protein 1926 50.24 0 2225332..2227224 - 630 145599249 - YPDSF_1969 - ion transport protein 1927 52.21 0 2227456..2228112 - 218 145599250 - YPDSF_1970 - putative phosphatase 1928 46.46 0 2228277..2228771 - 164 145599251 - YPDSF_1971 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0