version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1765 49.14 0 2041307..2042350 + 347 145599088 - YPDSF_1806 - LacI family sucrose operon repressor 1766 46.01 0 2042496..2043749 - 417 145599089 - YPDSF_1807 - isocitrate dehydrogenase 1767 49.28 0 2043880..2044506 + 208 145599090 - YPDSF_1808 - pseudouridine synthase 1768 49.44 0 2044499..2044945 + 148 145599091 - YPDSF_1809 - hypothetical protein 1769 49.91 0 2045132..2046247 + 371 145599092 trmU YPDSF_1810 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1770 51.20 0 2046305..2046931 + 208 145599093 - YPDSF_1811 - hypothetical protein 1771 47.56 0 2046992..2048362 + 456 145599094 - YPDSF_1812 - adenylosuccinate lyase 1772 44.07 0 2048550..2049173 + 207 145599095 - YPDSF_1813 - lipoprotein 1773 48.07 0 2049384..2050055 + 223 145599096 - YPDSF_1814 - DNA-binding transcriptional regulator PhoP 1774 46.19 0 2050061..2051515 + 484 145599097 - YPDSF_1815 - sensor protein PhoQ 1775 48.30 0 2051545..2052720 + 391 145599098 - YPDSF_1816 - hypothetical protein 1776 45.31 0 2053141..2054376 - 411 145599099 - YPDSF_1817 - peptidase T 1777 48.15 0 2054706..2055542 - 278 145599100 - YPDSF_1818 - NAD-dependent deacetylase 1778 51.79 0 2055591..2055758 - 55 145599101 - YPDSF_1819 - hypothetical protein 1779 50.58 0 2055736..2056506 - 256 145599102 - YPDSF_1820 - N-acetyl-D-glucosamine kinase 1780 48.96 0 2056525..2057772 - 415 145599103 - YPDSF_1821 - outer membrane-specific lipoprotein transporter subunit LolE 1781 49.36 0 2057772..2058476 - 234 145599104 lolD YPDSF_1822 - lipoprotein transporter ATP-binding subunit 1782 52.04 0 2058469..2059671 - 400 145599105 - YPDSF_1823 - outer membrane-specific lipoprotein transporter subunit LolC 1783 51.23 0 2059941..2063387 + 1148 145599106 - YPDSF_1824 - transcription-repair coupling factor 1784 49.44 0 2063626..2064165 - 179 145599107 - YPDSF_1825 - hypothetical protein 1785 49.63 0 2064495..2065703 - 402 145599108 - YPDSF_1826 - transposase for the IS285 insertion element 1786 32.61 -2 2065799..2066212 - 137 145599109 - YPDSF_1827 - hypothetical protein 1787 39.67 -1 2066220..2066708 - 162 145599110 - YPDSF_1828 - hypothetical protein 1788 39.49 -1 2066962..2067156 - 64 145599111 - YPDSF_1829 - hypothetical protein 1789 48.28 0 2067327..2068631 - 434 145599112 - YPDSF_1830 - NADH dehydrogenase 1790 42.73 -1 2069006..2069548 - 180 145599113 - YPDSF_1831 - hypothetical protein 1791 51.86 0 2069676..2070695 - 339 145599114 - YPDSF_1832 - beta-hexosaminidase 1792 49.83 0 2070778..2071644 - 288 145599115 - YPDSF_1833 - hypothetical protein 1793 51.39 0 2071625..2072200 - 191 145599116 - YPDSF_1834 - putative lipoprotein 1794 49.49 0 2072241..2072630 - 129 145599117 - YPDSF_1835 - putative lipoprotein 1795 49.44 0 2072665..2073018 - 117 145599118 - YPDSF_1836 - purine nucleoside phosphoramidase 1796 47.99 0 2073192..2074010 - 272 145599119 - YPDSF_1837 - shikimate 5-dehydrogenase 1797 45.75 0 2074453..2074911 - 152 145599120 - YPDSF_1838 - transposase for the IS1541 insertion element 1798 48.40 0 2075101..2076534 - 477 145599121 - YPDSF_1839 - glucose-specific PTS system IIBC components 1799 49.63 0 2076840..2077649 - 269 145599122 - YPDSF_1840 - putative metallodependent hydrolase 1800 52.39 0 2077664..2078686 - 340 145599123 - YPDSF_1841 - DNA polymerase III subunit delta' 1801 53.83 +1 2078686..2079324 - 212 145599124 tdk YPDSF_1842 - thymidylate kinase 1802 46.30 0 2079314..2080339 - 341 145599125 - YPDSF_1843 - hypothetical protein 1803 48.82 0 2080608..2081414 - 268 145599126 - YPDSF_1844 - 4-amino-4-deoxychorismate lyase 1804 45.97 0 2081830..2082288 - 152 145599127 - YPDSF_1845 - transposase for the IS1541 insertion element 1805 49.28 0 2082488..2083729 - 413 145599128 - YPDSF_1846 - 3-oxoacyl-(acyl carrier protein) synthase II 1806 43.46 0 2083824..2084060 - 78 145599129 acpP YPDSF_1847 - acyl carrier protein 1807 48.30 0 2084214..2084948 - 244 145599130 fabG YPDSF_1848 - 3-ketoacyl-(acyl-carrier-protein) reductase 1808 51.51 0 2084962..2085891 - 309 145599131 - YPDSF_1849 - malonyl CoA-acyl carrier protein transacylase 1809 50.68 0 2085929..2086879 - 316 145599132 - YPDSF_1850 - 3-oxoacyl-(acyl carrier protein) synthase III 1810 52.27 0 2086886..2087920 - 344 145599133 - YPDSF_1851 - putative glycerol-3-phosphate acyltransferase PlsX 1811 55.36 +1 2087954..2088121 - 55 145599134 rpmF YPDSF_1852 - 50S ribosomal protein L32 1812 46.10 0 2088134..2088658 - 174 145599135 - YPDSF_1853 - hypothetical protein 1813 47.29 0 2088788..2089396 + 202 145599136 - YPDSF_1854 - Maf-like protein 1814 50.36 0 2089519..2090481 - 320 145599137 - YPDSF_1855 - 23S rRNA pseudouridylate synthase C 1815 51.08 0 2091056..2094706 + 1216 145599138 rne YPDSF_1856 - ribonuclease E 1816 44.44 0 2094754..2094870 - 38 145599139 - YPDSF_1857 - hypothetical protein 1817 41.67 -1 2094964..2095251 - 95 145599140 - YPDSF_1858 - hypothetical protein 1818 49.57 0 2095486..2096532 + 348 145599141 - YPDSF_1859 - dihydroorotase 1819 45.12 0 2096845..2097090 + 81 145599142 - YPDSF_1860 - DNA damage-inducible protein I 1820 42.09 -1 2097596..2097892 + 98 145599143 bssS YPDSF_1861 - biofilm formation regulatory protein BssS 1821 49.63 0 2097855..2099063 - 402 145599144 - YPDSF_1862 - transposase for the IS285 insertion element 1822 48.30 0 2099424..2100539 + 371 145599145 solA YPDSF_1863 - N-methyltryptophan oxidase 1823 37.72 -2 2100806..2101420 + 204 145599146 - YPDSF_1864 - LuxR family regulatory protein 1824 46.08 0 2101992..2103050 - 352 145599147 tqsA YPDSF_1865 - putative transport protein 1825 46.16 0 2103199..2104266 - 355 145599148 - YPDSF_1866 - hypothetical protein 1826 44.96 0 2104310..2104438 - 42 145599149 - YPDSF_1867 - hypothetical protein 1827 46.17 0 2104625..2105029 - 134 145599150 - YPDSF_1868 - hypothetical protein 1828 48.25 0 2105035..2105148 + 37 145599151 - YPDSF_1869 - hypothetical protein 1829 44.40 0 2105317..2105994 - 225 145599152 - YPDSF_1870 - hypothetical protein 1830 36.90 -2 2106425..2107069 + 214 145599153 - YPDSF_1871 - N-acylhomoserine lactone synthase YpeI 1831 33.33 -2 2107062..2107799 - 245 145599154 - YPDSF_1872 - quorum-sensing transcriptional activator YpeR 1832 50.38 0 2108286..2109212 - 308 145599155 - YPDSF_1873 - LysR family transcriptional regulator 1833 47.90 0 2109660..2111018 + 452 145599156 - YPDSF_1874 - transporter protein 1834 51.19 0 2111065..2111568 + 167 145599157 - YPDSF_1875 - hypothetical protein 1835 47.16 0 2111579..2112598 + 339 145599158 - YPDSF_1876 - oxidoreductase 1836 50.63 0 2112676..2113230 - 184 145599159 - YPDSF_1877 - hypothetical protein 1837 48.26 0 2113241..2114245 - 334 145599160 - YPDSF_1878 - hypothetical protein 1838 51.21 0 2114263..2115213 - 316 145599161 - YPDSF_1879 - hypothetical protein 1839 44.84 0 2115210..2116556 - 448 145599162 - YPDSF_1880 - hypothetical protein 1840 48.60 0 2116965..2120252 - 1095 145599163 - YPDSF_1881 - hypothetical protein 1841 47.81 0 2120249..2121229 - 326 145599164 - YPDSF_1882 - hypothetical protein 1842 50.36 0 2122316..2123560 + 414 145599165 - YPDSF_1883 - membrane protein 1843 46.04 0 2124173..2125447 - 424 145599166 - YPDSF_1884 - hypothetical protein 1844 43.05 -1 2125486..2126607 - 373 145599167 - YPDSF_1885 - hypothetical protein 1845 48.99 0 2126724..2127662 - 312 145599168 - YPDSF_1886 - hypothetical protein 1846 51.80 0 2127689..2128744 - 351 145599169 - YPDSF_1887 - hypothetical protein 1847 41.33 -1 2128891..2129715 - 274 145599170 - YPDSF_1888 - sugar ABC transporter, permease protein 1848 41.21 -1 2129716..2130591 - 291 145599171 - YPDSF_1889 - sugar ABC transporter, permease protein 1849 45.61 0 2130700..2131986 - 428 145599172 - YPDSF_1890 - solute-binding protein 1850 46.49 0 2132258..2133298 + 346 145599173 - YPDSF_1891 - LacI family transcriptional regulator 1851 46.29 0 2133315..2134703 + 462 145599174 - YPDSF_1892 - phosphomannomutase 1852 44.72 0 2134803..2135882 + 359 145599175 - YPDSF_1893 - mannitol transport ATP-binding protein 1853 47.62 0 2136010..2136135 - 41 145599176 - YPDSF_1894 - hypothetical protein 1854 39.74 -1 2136147..2136677 - 176 145599177 - YPDSF_1895 - hypothetical protein 1855 47.59 0 2136950..2137447 - 165 145599178 - YPDSF_1896 - hypothetical protein 1856 38.69 -1 2138048..2138215 - 55 145599179 - YPDSF_1897 - hypothetical protein 1857 33.84 -2 2138418..2138615 - 65 145599180 - YPDSF_1898 - hypothetical protein 1858 51.72 0 2138625..2140658 - 677 145599181 - YPDSF_1899 - hypothetical protein 1859 48.41 0 2141322..2141573 - 83 145599182 - YPDSF_1900 - hypothetical protein 1860 32.16 -2 2141818..2142327 - 169 145599183 - YPDSF_1901 - hypothetical protein 1861 57.47 +1 2142329..2149876 - 2515 145599184 - YPDSF_1902 - hemolysin 1862 53.94 +1 2150080..2151768 - 562 145599185 - YPDSF_1903 - hemolysin activator protein 1863 46.79 0 2152421..2153386 - 321 145599186 - YPDSF_1904 - dioxygenase beta subunit 1864 47.29 0 2153482..2154606 - 374 145599187 - YPDSF_1905 - dioxygenase alpha subunit 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0