version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1627 48.02 0 1869481..1870338 - 285 145598950 tsf YPDSF_1668 - elongation factor Ts 1628 47.80 0 1870466..1871191 - 241 145598951 rpsB YPDSF_1669 - 30S ribosomal protein S2 1629 48.86 0 1871626..1872417 + 263 145598952 - YPDSF_1670 - methionine aminopeptidase 1630 49.11 0 1872477..1875158 + 893 145598953 - YPDSF_1671 - PII uridylyl-transferase 1631 49.33 0 1875333..1876157 + 274 145598954 dapD YPDSF_1672 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 1632 38.97 -1 1876281..1876670 + 129 145598955 - YPDSF_1673 - hypothetical protein 1633 49.56 0 1876760..1877209 - 149 145598956 - YPDSF_1674 - flavodoxin 1634 48.71 0 1877237..1878010 - 257 145598957 - YPDSF_1675 - tRNA pseudouridine synthase C 1635 48.65 0 1878010..1878342 - 110 145598958 - YPDSF_1676 - hypothetical protein 1636 45.97 0 1878596..1879054 - 152 145598959 - YPDSF_1677 - transposase for the IS1541 insertion element 1637 44.75 0 1879744..1880295 - 183 145598960 - YPDSF_1678 - SecY interacting protein Syd 1638 46.69 0 1880427..1881272 + 281 145598961 queF YPDSF_1679 - 7-cyano-7-deazaguanine reductase 1639 46.30 0 1881425..1882789 + 454 145598962 - YPDSF_1680 - hypothetical protein 1640 47.75 0 1883049..1883804 + 251 145598963 xni YPDSF_1681 - exonuclease IX 1641 45.98 0 1884055..1885161 - 368 145598964 - YPDSF_1682 - putative RNA 2'-O-ribose methyltransferase 1642 48.23 0 1885154..1885549 - 131 145598965 - YPDSF_1683 - hypothetical protein 1643 49.02 0 1885715..1886632 - 305 145598966 - YPDSF_1684 - DNA-binding transcriptional activator GcvA 1644 46.44 0 1887193..1888497 + 434 145598967 - YPDSF_1685 - cysteine sulfinate desulfinase 1645 52.25 0 1888632..1889075 + 147 145598968 - YPDSF_1686 - hypothetical protein 1646 48.43 0 1889111..1889938 - 275 145598969 - YPDSF_1687 - hypothetical protein 1647 48.17 0 1890081..1891253 - 390 145598970 mltA YPDSF_1688 - murein transglycosylase A 1648 46.60 0 1892175..1893425 - 416 145598971 - YPDSF_1689 - N-acetylmuramoyl-L-alanine amidase AmiC precursor 1649 45.77 0 1893661..1893861 + 66 145598972 - YPDSF_1690 - amino-acid acetyltransferase 1650 52.88 +1 1893943..1894965 + 340 145598973 - YPDSF_1691 - transposase 1651 50.79 0 1894965..1895657 + 230 145598974 - YPDSF_1692 - ATPase 1652 48.11 0 1895696..1896859 + 387 145598975 - YPDSF_1693 - N-acetylglutamate synthase 1653 49.31 0 1897014..1898972 - 652 145598976 RecD YPDSF_1694 - exonuclease V subunit alpha 1654 49.47 0 1898969..1902631 - 1220 145598977 RecB YPDSF_1695 - exonuclease V subunit beta 1655 46.76 0 1902628..1905516 - 962 145598978 - YPDSF_1696 - protease III precursor 1656 47.12 0 1905598..1908969 - 1123 145598979 recC YPDSF_1697 - exonuclease V subunit gamma 1657 48.91 0 1909104..1909469 - 121 145598980 - YPDSF_1698 - prepilin peptidase dependent protein 1658 48.20 0 1909502..1909972 - 156 145598981 - YPDSF_1699 - hypothetical protein 1659 48.60 0 1909969..1910577 - 202 145598982 - YPDSF_1700 - hypothetical protein 1660 46.14 0 1910568..1911137 - 189 145598983 - YPDSF_1701 - hypothetical protein 1661 46.67 0 1911373..1912167 - 264 145598984 thyA YPDSF_1702 - thymidylate synthase 1662 49.37 0 1912174..1913046 - 290 145598985 - YPDSF_1703 - prolipoprotein diacylglyceryl transferase 1663 53.36 +1 1913297..1915543 - 748 145598986 - YPDSF_1704 - fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 1664 47.73 0 1915556..1916083 - 175 145598987 - YPDSF_1705 - dinucleoside polyphosphate hydrolase 1665 52.98 +1 1916780..1917466 + 228 145598988 - YPDSF_1706 - DNA mismatch repair protein 1666 50.14 0 1917855..1918895 + 346 145598989 - YPDSF_1707 - putative aldo-keto reductase 1667 33.33 -2 1919602..1919835 + 77 145598990 - YPDSF_1708 - hypothetical protein 1668 52.83 0 1919864..1921084 - 406 145598991 - YPDSF_1709 - hypothetical protein 1669 50.95 0 1921081..1923237 - 718 145598992 - YPDSF_1710 - bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 1670 51.95 0 1923686..1925947 - 753 145598993 - YPDSF_1711 - biotin sulfoxide reductas2 1671 52.20 0 1926257..1927279 + 340 145598994 - YPDSF_1712 - DNA-binding transcriptional regulator GalR 1672 50.99 0 1927276..1928538 - 420 145598995 - YPDSF_1713 - diaminopimelate decarboxylase 1673 51.38 0 1928753..1929694 + 313 145598996 - YPDSF_1714 - DNA-binding transcriptional regulator LysR 1674 53.66 +1 1929691..1930851 - 386 145598997 - YPDSF_1715 - sugar transport protein 1675 49.94 0 1931220..1932128 - 302 145598998 - YPDSF_1716 - LysR family transcriptional regulator 1676 44.14 0 1932235..1933122 + 295 145598999 - YPDSF_1717 - hypothetical protein 1677 47.96 0 1933235..1933870 + 211 145599000 - YPDSF_1718 - hypothetical protein 1678 45.09 0 1933856..1935547 - 563 145599001 - YPDSF_1719 - methyl-accepting chemotaxis protein 1679 33.33 -2 1935711..1936427 - 238 145599002 - YPDSF_1720 - hypothetical protein 1680 49.63 0 1936470..1937678 - 402 145599003 - YPDSF_1721 - transposase for the IS285 insertion element 1681 41.60 -1 1937726..1938076 - 116 145599004 - YPDSF_1722 - hypothetical protein 1682 47.19 0 1938412..1939248 + 278 145599005 - YPDSF_1723 - 5-keto-4-deoxyuronate isomerase 1683 48.70 0 1939295..1940101 + 268 145599006 - YPDSF_1724 - 2-deoxy-D-gluconate 3-dehydrogenase 1684 47.42 0 1940437..1942104 + 555 145599007 - YPDSF_1725 - exopolygalacturonate lyase 1685 42.99 -1 1942145..1943035 + 296 145599008 - YPDSF_1726 - ABC sugar transporter (permease) 1686 45.39 0 1943028..1943948 + 306 145599009 - YPDSF_1727 - sugar ABC transporter (permease) 1687 45.74 0 1943962..1945089 + 375 145599010 - YPDSF_1728 - sugar ABC transporter 1688 41.07 -1 1945105..1946397 + 430 145599011 - YPDSF_1729 - sugar-binding protein 1689 40.79 -1 1946695..1947405 + 236 145599012 - YPDSF_1730 - hypothetical protein 1690 48.09 0 1947975..1948523 + 182 145599013 - YPDSF_1731 - hypothetical protein 1691 47.20 0 1948727..1950118 + 463 145599014 - YPDSF_1732 - transport protein 1692 48.24 0 1950333..1951184 - 283 145599015 - YPDSF_1733 - N-acetylmuramoyl-L-alanine amidase 1693 44.19 0 1951569..1952360 - 263 145599016 - YPDSF_1734 - IclR family transcriptional regulator 1694 45.93 0 1952547..1953713 - 388 145599017 - YPDSF_1735 - oligogalacturonate lyase 1695 51.24 0 1954040..1955407 + 455 145599018 - YPDSF_1736 - transport protein 1696 48.26 0 1955461..1956264 - 267 145599019 - YPDSF_1737 - chaperone protein 1697 46.13 0 1956261..1957424 - 387 145599020 - YPDSF_1738 - fimbrial protein 1698 49.37 0 1957421..1960033 - 870 145599021 - YPDSF_1739 - outer membrane usher protein 1699 44.10 0 1960115..1960894 - 259 145599022 - YPDSF_1740 - chaperone protein 1700 42.54 -1 1961047..1961589 - 180 145599023 - YPDSF_1741 - fimbrial protein 1701 47.05 0 1962247..1963128 - 293 145599024 - YPDSF_1742 - heat shock protein HtpX 1702 47.23 0 1963583..1965655 - 690 145599025 - YPDSF_1743 - carboxy-terminal protease 1703 52.80 0 1965675..1966388 - 237 145599026 - YPDSF_1744 - putative solute/DNA competence effector 1704 45.18 0 1966484..1966981 - 165 145599027 - YPDSF_1745 - hypothetical protein 1705 49.96 0 1967108..1968460 + 450 145599028 - YPDSF_1746 - hypothetical protein 1706 49.74 0 1968429..1971080 + 883 145599029 - YPDSF_1747 - hypothetical protein 1707 46.67 0 1971560..1972114 + 184 145599030 - YPDSF_1748 - hypothetical protein 1708 49.72 0 1972120..1972650 + 176 145599031 - YPDSF_1749 - hypothetical protein 1709 46.77 0 1972671..1973228 + 185 145599032 - YPDSF_1750 - hypothetical protein 1710 44.62 0 1973259..1974011 + 250 145599033 - YPDSF_1751 - chaperone protein 1711 46.12 0 1974199..1976646 + 815 145599034 - YPDSF_1752 - outer membrane usher protein 1712 42.22 -1 1976852..1977841 + 329 145599035 - YPDSF_1753 - hypothetical protein 1713 40.83 -1 1978049..1978288 + 79 145599036 - YPDSF_1754 - hypothetical protein 1714 47.95 0 1978398..1978787 - 129 145599037 - YPDSF_1755 - hypothetical protein 1715 45.24 0 1979055..1979180 + 41 145599038 - YPDSF_1756 - hypothetical protein 1716 52.79 0 1979194..1980216 + 340 145599039 - YPDSF_1757 - transposase for insertion sequence IS100 1717 50.38 0 1980216..1980995 + 259 145599040 - YPDSF_1758 - transposase/IS protein 1718 48.13 0 1981946..1983202 - 418 145599041 - YPDSF_1759 - lipoprotein 1719 43.78 0 1983595..1983843 - 82 145599042 - YPDSF_1760 - hypothetical protein 1720 45.04 0 1984990..1986219 + 409 145599043 - YPDSF_1761 - alanine racemase 1721 41.61 -1 1986838..1987791 - 317 145599044 - YPDSF_1762 - hypothetical protein 1722 58.06 +2 1987891..1988436 - 181 145599045 - YPDSF_1763 - surface protein 1723 58.16 +2 1988312..1990522 - 736 145599046 - YPDSF_1764 - hypothetical protein 1724 41.70 -1 1990879..1991643 - 254 145599047 - YPDSF_1765 - N-acetylmuramoyl-L-alanine amidase 1725 37.50 -2 1991775..1991894 + 39 145599048 - YPDSF_1766 - hypothetical protein 1726 48.99 0 1992214..1992858 - 214 145599049 - YPDSF_1767 - chemotaxis regulator CheZ 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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