version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1210 34.39 -2 1409647..1410216 + 189 145598533 - YPDSF_1241 - hypothetical protein 1211 47.49 0 1410634..1410972 - 112 145598534 - YPDSF_1242 - transposase 1212 49.25 0 1410972..1411832 - 286 145598535 - YPDSF_1243 - hypothetical protein 1213 36.86 -2 1411880..1412956 - 358 145598536 - YPDSF_1244 - hypothetical protein 1214 51.55 0 1413022..1413312 - 96 145598537 - YPDSF_1245 - hypothetical protein 1215 44.69 0 1413293..1413565 - 90 145598538 - YPDSF_1246 - hypothetical protein 1216 52.55 0 1413696..1413950 + 84 145598539 - YPDSF_1247 - hypothetical protein 1217 51.33 0 1413947..1414246 + 99 145598540 - YPDSF_1248 - hypothetical protein 1218 53.47 +1 1414263..1414550 + 95 145598541 - YPDSF_1249 - hypothetical protein 1219 47.22 0 1414985..1415200 + 71 145598542 - YPDSF_1250 - membrane protein 1220 45.42 0 1415197..1415502 + 101 145598543 - YPDSF_1251 - hypothetical protein 1221 53.10 +1 1416177..1416596 + 139 145598544 - YPDSF_1253 - hypothetical protein 1222 57.08 +1 1416668..1417627 + 319 145598545 - YPDSF_1254 - transposase 1223 30.43 -2 1417847..1418191 + 114 145598546 - YPDSF_1255 - hypothetical protein 1224 35.06 -2 1418773..1418946 - 57 145598547 - YPDSF_1256 - hypothetical protein 1225 45.34 0 1420002..1420559 + 185 145598548 - YPDSF_1258 - hypothetical protein 1226 46.08 0 1421299..1421847 - 182 145598549 - YPDSF_1259 - phosphatidylglycerophosphate synthetase 1227 44.77 0 1421906..1423759 - 617 145598550 uvrC YPDSF_1260 - excinuclease ABC subunit C 1228 45.51 0 1423731..1424387 - 218 145598551 - YPDSF_1261 - response regulator 1229 43.56 0 1425050..1425274 + 74 145598552 - YPDSF_1262 - hypothetical protein 1230 39.13 -1 1425399..1425743 + 114 145598553 - YPDSF_1263 - membrane protein 1231 39.22 -1 1425771..1426025 - 84 145598554 - YPDSF_1264 - hypothetical protein 1232 37.68 -2 1426365..1426916 - 183 145598555 - YPDSF_1265 - attachment invasion locus protein 1233 46.60 0 1428031..1429455 + 474 145598556 - YPDSF_1266 - D-alanine/D-serine/glycine permease 1234 50.72 0 1429581..1430759 - 392 145598557 - YPDSF_1267 - hypothetical protein 1235 51.50 0 1431153..1431752 + 199 145598558 - YPDSF_1268 - TrpR binding protein WrbA 1236 49.04 0 1431838..1433142 - 434 145598559 - YPDSF_1269 - hypothetical protein 1237 46.95 0 1433153..1434283 - 376 145598560 - YPDSF_1270 - hypothetical protein 1238 49.23 0 1434313..1435161 - 282 145598561 - YPDSF_1271 - membrane protein 1239 48.82 0 1435494..1436978 - 494 145598562 - YPDSF_1272 - proline permease 1240 40.91 -1 1437008..1437205 - 65 145598563 - YPDSF_1273 - hypothetical protein 1241 52.79 0 1437550..1441521 + 1323 145598564 putA YPDSF_1274 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1242 43.45 0 1441985..1442320 + 111 145598565 - YPDSF_1275 - hypothetical protein 1243 44.62 0 1442320..1442691 + 123 145598566 - YPDSF_1276 - hypothetical protein 1244 49.48 0 1442983..1443744 - 253 145598567 - YPDSF_1277 - putative amino-acid ABC transporter ATP-binding protein YecC 1245 49.62 0 1443747..1444409 - 220 145598568 - YPDSF_1278 - amino-acid ABC transporter (permease) 1246 51.26 0 1445328..1446320 - 330 145598569 - YPDSF_1281 - D-cysteine desulfhydrase 1247 41.96 -1 1446609..1447118 - 169 145598570 - YPDSF_1282 - protein FliZ 1248 52.97 +1 1447340..1448062 - 240 145598571 fliA YPDSF_1283 - flagellar biosynthesis sigma factor 1249 46.85 0 1448409..1449518 - 369 145598572 - YPDSF_1284 - flagellin 1250 46.54 0 1449815..1451215 + 466 145598573 fliD YPDSF_1285 - flagellar capping protein 1251 46.62 0 1451226..1451624 + 132 145598574 fliS YPDSF_1286 - flagellar protein FliS 1252 41.05 -1 1451635..1451997 + 120 145598575 - YPDSF_1287 - flagellar biosynthesis protein FliT 1253 43.38 0 1452298..1453173 + 291 145598576 - YPDSF_1288 - AraC family transcription regulator 1254 43.01 -1 1453527..1456481 + 984 145598577 - YPDSF_1289 - hypothetical protein 1255 49.18 0 1456642..1457253 + 203 145598578 - YPDSF_1290 - glycosidase 1256 41.93 -1 1457439..1457915 - 158 145598579 - YPDSF_1291 - hypothetical protein 1257 43.33 0 1457926..1458105 - 59 145598580 - YPDSF_1292 - hypothetical protein 1258 49.68 0 1458525..1458836 - 103 145598581 fliE YPDSF_1293 - flagellar hook-basal body protein FliE 1259 53.30 +1 1459189..1460901 + 570 145598582 fliF YPDSF_1294 - flagellar MS-ring protein 1260 52.17 0 1460898..1461890 + 330 145598583 fliG YPDSF_1295 - flagellar motor switch protein G 1261 54.76 +1 1461965..1462594 + 209 145598584 fliH YPDSF_1296 - flagellar assembly protein H 1262 55.22 +1 1462491..1463993 + 500 145598585 fliI YPDSF_1297 - flagellum-specific ATP synthase 1263 47.87 0 1464093..1464539 + 148 145598586 fliJ YPDSF_1298 - flagellar biosynthesis chaperone 1264 55.28 +1 1464536..1465888 + 450 145598587 - YPDSF_1299 - flagellar hook-length control protein FliK 1265 48.40 0 1466062..1466625 + 187 145598588 fliL YPDSF_1300 - flagellar basal body-associated protein FliL 1266 50.50 0 1466631..1467632 + 333 145598589 fliM YPDSF_1301 - flagellar motor switch protein FliM 1267 49.64 0 1467629..1468045 + 138 145598590 fliN YPDSF_1302 - flagellar motor switch protein FliN 1268 57.73 +2 1468045..1468581 + 178 145598591 - YPDSF_1303 - flagellar protein FliO 1269 51.39 0 1468578..1469402 + 274 145598592 fliP YPDSF_1304 - flagellar biosynthesis protein FliP 1270 52.22 0 1469508..1469777 + 89 145598593 fliQ YPDSF_1305 - flagellar biosynthesis protein FliQ 1271 49.71 0 1469708..1470562 + 284 145598594 fliR YPDSF_1306 - flagellar biosynthesis protein FliR 1272 45.00 0 1470996..1471415 + 139 145598595 - YPDSF_1307 - hypothetical protein 1273 52.29 0 1471673..1472632 - 319 145598596 - YPDSF_1308 - sugar kinase 1274 51.42 0 1472681..1473703 - 340 145598597 - YPDSF_1309 - sugar ABC transporter, permease 1275 51.08 0 1473706..1475283 - 525 145598598 - YPDSF_1310 - sugar ABC transporter, ATP-binding protein 1276 50.70 0 1475349..1476344 - 331 145598599 - YPDSF_1311 - sugar-binding periplasmic protein 1277 50.37 0 1476387..1477466 - 359 145598600 - YPDSF_1312 - sugar transport system permease protein 1278 52.01 0 1477596..1479662 - 688 145598601 - YPDSF_1313 - short chain dehydrogenase 1279 50.41 0 1479904..1480881 + 325 145598602 - YPDSF_1314 - transcriptional regulatory protein 1280 47.63 0 1480910..1481923 - 337 145598603 flgL YPDSF_1315 - flagellar hook-associated protein FlgL 1281 50.09 0 1482029..1483693 - 554 145598604 flgK YPDSF_1316 - flagellar hook-associated protein FlgK 1282 54.07 +1 1483992..1484936 - 314 145598605 flgJ YPDSF_1317 - peptidoglycan hydrolase 1283 54.59 +1 1484936..1486045 - 369 145598606 flgI YPDSF_1318 - flagellar basal body P-ring protein 1284 52.17 0 1486060..1486749 - 229 145598607 flgH YPDSF_1319 - flagellar basal body L-ring protein 1285 51.65 0 1486893..1487591 - 232 145598608 - YPDSF_1320 - flagellar basal-body rod protein FlgG 1286 57.94 +2 1487572..1488201 - 209 145598609 flgF YPDSF_1321 - flagellar basal body rod protein FlgF 1287 50.82 0 1488223..1489509 - 428 145598610 flgE YPDSF_1322 - flagellar hook protein FlgE 1288 52.95 +1 1489711..1490388 - 225 145598611 flgD YPDSF_1323 - flagellar basal body rod modification protein 1289 54.07 +1 1490403..1490807 - 134 145598612 flgC YPDSF_1324 - flagellar basal body rod protein FlgC 1290 50.24 0 1490813..1491226 - 137 145598613 flgB YPDSF_1325 - flagellar basal body rod protein FlgB 1291 51.85 0 1491408..1492163 + 251 145598614 flgA YPDSF_1326 - flagellar basal body P-ring biosynthesis protein FlgA 1292 47.52 0 1492314..1492616 + 100 145598615 - YPDSF_1327 - anti-sigma28 factor FlgM 1293 48.75 0 1492635..1493075 + 146 145598616 - YPDSF_1328 - flagella synthesis protein FlgN 1294 50.17 0 1493265..1495337 - 690 145598617 - YPDSF_1329 - hypothetical protein 1295 45.75 0 1495427..1495885 - 152 145598618 - YPDSF_1330 - transposase for the IS1541 insertion element 1296 43.98 0 1495875..1496879 - 334 145598619 - YPDSF_1331 - invasin 1297 52.96 +1 1497543..1497965 - 140 145598620 - YPDSF_1332 - flagellar protein FlhE precursor 1298 51.80 0 1497965..1500043 - 692 145598621 flhA YPDSF_1333 - flagellar biosynthesis protein FlhA 1299 52.54 0 1500043..1501203 - 386 145598622 flhB YPDSF_1334 - flagellar biosynthesis protein FlhB 1300 46.84 0 1501735..1502193 + 152 145598623 - YPDSF_1335 - membrane protein 1301 38.53 -1 1502187..1502513 + 108 145598624 - YPDSF_1336 - acyl carrier protein 1302 44.44 0 1503036..1503377 - 113 145598625 - YPDSF_1337 - hypothetical protein 1303 49.04 0 1503474..1504358 - 294 145598626 - YPDSF_1338 - copper resistance protein D 1304 46.77 0 1504361..1504747 - 128 145598627 - YPDSF_1339 - copper resistance protein 1305 39.80 -1 1505153..1505662 - 169 145598628 - YPDSF_1340 - ferritin 1306 44.16 0 1506063..1506293 + 76 145598629 - YPDSF_1341 - DNA polymerase III subunit theta 1307 49.11 0 1506353..1507303 - 316 145598630 - YPDSF_1342 - proline iminopeptidase 1308 46.54 0 1508025..1510076 - 683 145598631 - YPDSF_1343 - oligopeptidase B 1309 49.06 0 1510405..1510830 - 141 145598632 - YPDSF_1344 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0