version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1173 49.50 0 1358518..1361109 + 863 145598496 - YPDSF_1203 - fimbrial usher protein 1174 47.63 0 1361125..1362474 + 449 145598497 - YPDSF_1204 - hypothetical protein 1175 44.64 0 1362471..1362983 + 170 145598498 - YPDSF_1205 - pili assembly chaperone 1176 49.55 0 1363045..1364253 + 402 145598499 - YPDSF_1206 - transposase for the IS285 insertion element 1177 43.02 -1 1364277..1364534 + 85 145598500 - YPDSF_1207 - pili assembly chaperone 1178 52.65 0 1365074..1366336 + 420 145598501 - YPDSF_1208 - integrase 1179 55.25 +1 1366530..1367834 - 434 145598502 - YPDSF_1209 - salicylate synthase Irp9 1180 59.83 +2 1367862..1369250 - 462 145598503 - YPDSF_1210 - signal transducer 1181 58.62 +2 1369135..1370937 - 600 145598504 - YPDSF_1211 - inner membrane ABC-transporter YbtQ 1182 57.85 +2 1370924..1372636 - 570 145598505 - YPDSF_1212 - lipoprotein inner membrane ABC-transporter 1183 56.35 +1 1372893..1373852 + 319 145598506 - YPDSF_1213 - transcriptional regulator YbtA 1184 60.15 +2 1374043..1380150 + 2035 145598507 - YPDSF_1214 - yersiniabactin biosynthetic protein 1185 60.78 +2 1380238..1389729 + 3163 145598508 - YPDSF_1215 - yersiniabactin biosynthetic protein 1186 60.40 +2 1389726..1390826 + 366 145598509 - YPDSF_1216 - yersiniabactin biosynthetic protein YbtU 1187 58.43 +2 1390838..1391626 + 262 145598510 - YPDSF_1217 - yersiniabactin biosynthetic protein YbtT 1188 58.81 +2 1391630..1393207 + 525 145598511 - YPDSF_1218 - yersiniabactin siderophore biosynthetic protein 1189 56.53 +1 1393338..1395359 + 673 145598512 - YPDSF_1219 - pesticin/yersiniabactin receptor protein 1190 41.44 -1 1396605..1397159 + 184 145598513 - YPDSF_1220 - hypothetical protein 1191 43.01 -1 1397299..1397484 + 61 145598514 - YPDSF_1221 - transcriptional regulator 1192 37.58 -2 1397503..1397667 + 54 145598515 - YPDSF_1222 - hypothetical protein 1193 48.97 0 1397673..1398254 + 193 145598516 - YPDSF_1223 - hypothetical protein 1194 51.90 0 1398244..1398453 + 69 145598517 - YPDSF_1224 - hypothetical protein 1195 44.74 0 1398696..1398809 + 37 145598518 - YPDSF_1225 - hypothetical protein 1196 50.38 0 1398853..1399632 - 259 145598519 - YPDSF_1226 - transposase/IS protein 1197 52.79 0 1399632..1400654 - 340 145598520 - YPDSF_1227 - transposase 1198 41.94 -1 1401132..1401317 + 61 145598521 - YPDSF_1228 - hypothetical protein 1199 47.11 0 1401333..1401557 + 74 145598522 - YPDSF_1229 - hypothetical protein 1200 52.34 0 1401567..1401908 - 113 145598523 - YPDSF_1230 - ABC-type sugar transport system, ATPase components 1201 50.73 0 1401794..1402684 - 296 145598524 - YPDSF_1231 - binding-protein-dependent transport system, ATP-binding component 1202 51.21 0 1402709..1403536 - 275 145598525 - YPDSF_1232 - binding-protein-dependent transport system, inner membrane component 1203 52.03 0 1403529..1404389 - 286 145598526 - YPDSF_1233 - binding-protein-dependent transport system, inner membrane component 1204 51.85 0 1404456..1405724 - 422 145598527 - YPDSF_1234 - exported solute-binding protein 1205 54.44 +1 1405754..1406767 - 337 145598528 - YPDSF_1235 - oxidoreductase 1206 54.64 +1 1407435..1408232 - 265 145598529 - YPDSF_1236 - GntR family putative transcriptional regulatory protein 1207 38.89 -1 1408249..1408410 + 53 145598530 - YPDSF_1237 - hypothetical protein 1208 40.58 -1 1408577..1408783 - 68 145598531 - YPDSF_1239 - hypothetical protein 1209 35.63 -2 1409201..1409635 + 144 145598532 - YPDSF_1240 - hypothetical protein 1210 34.39 -2 1409647..1410216 + 189 145598533 - YPDSF_1241 - hypothetical protein 1211 47.49 0 1410634..1410972 - 112 145598534 - YPDSF_1242 - transposase 1212 49.25 0 1410972..1411832 - 286 145598535 - YPDSF_1243 - hypothetical protein 1213 36.86 -2 1411880..1412956 - 358 145598536 - YPDSF_1244 - hypothetical protein 1214 51.55 0 1413022..1413312 - 96 145598537 - YPDSF_1245 - hypothetical protein 1215 44.69 0 1413293..1413565 - 90 145598538 - YPDSF_1246 - hypothetical protein 1216 52.55 0 1413696..1413950 + 84 145598539 - YPDSF_1247 - hypothetical protein 1217 51.33 0 1413947..1414246 + 99 145598540 - YPDSF_1248 - hypothetical protein 1218 53.47 +1 1414263..1414550 + 95 145598541 - YPDSF_1249 - hypothetical protein 1219 47.22 0 1414985..1415200 + 71 145598542 - YPDSF_1250 - membrane protein 1220 45.42 0 1415197..1415502 + 101 145598543 - YPDSF_1251 - hypothetical protein 1221 53.10 +1 1416177..1416596 + 139 145598544 - YPDSF_1253 - hypothetical protein 1222 57.08 +1 1416668..1417627 + 319 145598545 - YPDSF_1254 - transposase 1223 30.43 -2 1417847..1418191 + 114 145598546 - YPDSF_1255 - hypothetical protein 1224 35.06 -2 1418773..1418946 - 57 145598547 - YPDSF_1256 - hypothetical protein 1225 45.34 0 1420002..1420559 + 185 145598548 - YPDSF_1258 - hypothetical protein 1226 46.08 0 1421299..1421847 - 182 145598549 - YPDSF_1259 - phosphatidylglycerophosphate synthetase 1227 44.77 0 1421906..1423759 - 617 145598550 uvrC YPDSF_1260 - excinuclease ABC subunit C 1228 45.51 0 1423731..1424387 - 218 145598551 - YPDSF_1261 - response regulator 1229 43.56 0 1425050..1425274 + 74 145598552 - YPDSF_1262 - hypothetical protein 1230 39.13 -1 1425399..1425743 + 114 145598553 - YPDSF_1263 - membrane protein 1231 39.22 -1 1425771..1426025 - 84 145598554 - YPDSF_1264 - hypothetical protein 1232 37.68 -2 1426365..1426916 - 183 145598555 - YPDSF_1265 - attachment invasion locus protein 1233 46.60 0 1428031..1429455 + 474 145598556 - YPDSF_1266 - D-alanine/D-serine/glycine permease 1234 50.72 0 1429581..1430759 - 392 145598557 - YPDSF_1267 - hypothetical protein 1235 51.50 0 1431153..1431752 + 199 145598558 - YPDSF_1268 - TrpR binding protein WrbA 1236 49.04 0 1431838..1433142 - 434 145598559 - YPDSF_1269 - hypothetical protein 1237 46.95 0 1433153..1434283 - 376 145598560 - YPDSF_1270 - hypothetical protein 1238 49.23 0 1434313..1435161 - 282 145598561 - YPDSF_1271 - membrane protein 1239 48.82 0 1435494..1436978 - 494 145598562 - YPDSF_1272 - proline permease 1240 40.91 -1 1437008..1437205 - 65 145598563 - YPDSF_1273 - hypothetical protein 1241 52.79 0 1437550..1441521 + 1323 145598564 putA YPDSF_1274 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1242 43.45 0 1441985..1442320 + 111 145598565 - YPDSF_1275 - hypothetical protein 1243 44.62 0 1442320..1442691 + 123 145598566 - YPDSF_1276 - hypothetical protein 1244 49.48 0 1442983..1443744 - 253 145598567 - YPDSF_1277 - putative amino-acid ABC transporter ATP-binding protein YecC 1245 49.62 0 1443747..1444409 - 220 145598568 - YPDSF_1278 - amino-acid ABC transporter (permease) 1246 51.26 0 1445328..1446320 - 330 145598569 - YPDSF_1281 - D-cysteine desulfhydrase 1247 41.96 -1 1446609..1447118 - 169 145598570 - YPDSF_1282 - protein FliZ 1248 52.97 +1 1447340..1448062 - 240 145598571 fliA YPDSF_1283 - flagellar biosynthesis sigma factor 1249 46.85 0 1448409..1449518 - 369 145598572 - YPDSF_1284 - flagellin 1250 46.54 0 1449815..1451215 + 466 145598573 fliD YPDSF_1285 - flagellar capping protein 1251 46.62 0 1451226..1451624 + 132 145598574 fliS YPDSF_1286 - flagellar protein FliS 1252 41.05 -1 1451635..1451997 + 120 145598575 - YPDSF_1287 - flagellar biosynthesis protein FliT 1253 43.38 0 1452298..1453173 + 291 145598576 - YPDSF_1288 - AraC family transcription regulator 1254 43.01 -1 1453527..1456481 + 984 145598577 - YPDSF_1289 - hypothetical protein 1255 49.18 0 1456642..1457253 + 203 145598578 - YPDSF_1290 - glycosidase 1256 41.93 -1 1457439..1457915 - 158 145598579 - YPDSF_1291 - hypothetical protein 1257 43.33 0 1457926..1458105 - 59 145598580 - YPDSF_1292 - hypothetical protein 1258 49.68 0 1458525..1458836 - 103 145598581 fliE YPDSF_1293 - flagellar hook-basal body protein FliE 1259 53.30 +1 1459189..1460901 + 570 145598582 fliF YPDSF_1294 - flagellar MS-ring protein 1260 52.17 0 1460898..1461890 + 330 145598583 fliG YPDSF_1295 - flagellar motor switch protein G 1261 54.76 +1 1461965..1462594 + 209 145598584 fliH YPDSF_1296 - flagellar assembly protein H 1262 55.22 +1 1462491..1463993 + 500 145598585 fliI YPDSF_1297 - flagellum-specific ATP synthase 1263 47.87 0 1464093..1464539 + 148 145598586 fliJ YPDSF_1298 - flagellar biosynthesis chaperone 1264 55.28 +1 1464536..1465888 + 450 145598587 - YPDSF_1299 - flagellar hook-length control protein FliK 1265 48.40 0 1466062..1466625 + 187 145598588 fliL YPDSF_1300 - flagellar basal body-associated protein FliL 1266 50.50 0 1466631..1467632 + 333 145598589 fliM YPDSF_1301 - flagellar motor switch protein FliM 1267 49.64 0 1467629..1468045 + 138 145598590 fliN YPDSF_1302 - flagellar motor switch protein FliN 1268 57.73 +2 1468045..1468581 + 178 145598591 - YPDSF_1303 - flagellar protein FliO 1269 51.39 0 1468578..1469402 + 274 145598592 fliP YPDSF_1304 - flagellar biosynthesis protein FliP 1270 52.22 0 1469508..1469777 + 89 145598593 fliQ YPDSF_1305 - flagellar biosynthesis protein FliQ 1271 49.71 0 1469708..1470562 + 284 145598594 fliR YPDSF_1306 - flagellar biosynthesis protein FliR 1272 45.00 0 1470996..1471415 + 139 145598595 - YPDSF_1307 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0