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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1089 44.89 0 1254812..1255477 - 221 145598412 - YPDSF_1117 - flavodoxin 1090 47.34 0 1255668..1256759 - 363 145598413 - YPDSF_1118 - hypothetical protein 1091 51.23 0 1257024..1257347 + 107 145598414 - YPDSF_1119 - response regulator receiver 1092 52.79 0 1257374..1258396 + 340 145598415 - YPDSF_1120 - transposase 1093 50.38 0 1258396..1259175 + 259 145598416 - YPDSF_1121 - transposase/IS protein 1094 51.73 0 1259214..1259675 + 153 145598417 - YPDSF_1122 - transcriptional activator 1095 51.80 0 1259687..1261072 + 461 145598418 - YPDSF_1123 - two-component system sensor protein 1096 50.83 0 1261349..1261771 + 140 145598419 - YPDSF_1124 - decarboxylase 1097 53.93 +1 1261826..1262296 + 156 145598420 - YPDSF_1125 - hypothetical protein 1098 48.51 0 1262509..1263582 + 357 145598421 - YPDSF_1126 - hypothetical protein 1099 40.29 -1 1264373..1265278 + 301 145598422 - YPDSF_1127 - hypothetical protein 1100 40.62 -1 1265284..1266216 + 310 145598423 - YPDSF_1128 - hypothetical protein 1101 37.12 -2 1266203..1267153 + 316 145598424 - YPDSF_1129 - hypothetical protein 1102 40.38 -1 1267494..1268174 + 226 145598425 - YPDSF_1130 - dehydrogenase 1103 44.39 0 1268279..1268938 + 219 145598426 - YPDSF_1131 - hypothetical protein 1104 45.70 0 1269073..1269711 - 212 145598427 - YPDSF_1132 - hypothetical protein 1105 49.29 0 1269958..1272069 - 703 145598428 - YPDSF_1133 - hypothetical protein 1106 38.23 -2 1272647..1274809 + 720 145598429 - YPDSF_1134 - hypothetical protein 1107 49.55 0 1274855..1276063 - 402 145598430 - YPDSF_1135 - transposase for the IS285 insertion element 1108 38.86 -1 1276196..1277914 + 572 145598431 - YPDSF_1136 - hypothetical protein 1109 39.57 -1 1278084..1278548 + 154 145598432 - YPDSF_1137 - hypothetical protein 1110 50.59 0 1278709..1279896 - 395 145598433 - YPDSF_1138 - glycosyl transferase 1111 46.84 0 1279893..1280477 - 194 145598434 - YPDSF_1139 - hypothetical protein 1112 48.14 0 1280474..1281628 - 384 145598435 - YPDSF_1140 - glycosyl transferase 1113 49.78 0 1281628..1282539 - 303 145598436 - YPDSF_1141 - dehydrogenase 1114 52.06 0 1282724..1284010 - 428 145598437 - YPDSF_1142 - coenzyme synthetase 1115 53.53 +1 1284007..1284813 - 268 145598438 - YPDSF_1143 - hypothetical protein 1116 53.88 +1 1284806..1285822 - 338 145598439 - YPDSF_1144 - dehydrogenase 1117 52.17 0 1285836..1286366 - 176 145598440 - YPDSF_1145 - 3-oxoacyl-(acyl-carrier-protein) synthase III 1118 49.80 0 1286335..1286844 - 169 145598441 - YPDSF_1146 - hypothetical protein 1119 46.42 0 1287877..1289481 + 534 145598442 - YPDSF_1147 - hypothetical protein 1120 51.83 0 1289659..1290231 - 190 145598443 - YPDSF_1148 - hypothetical protein 1121 49.53 0 1290231..1291601 - 456 145598444 - YPDSF_1149 - N-formimino-L-glutamate deiminase 1122 50.91 0 1291749..1292516 + 255 145598445 - YPDSF_1150 - GntR family transcriptional regulatory protein 1123 50.29 0 1292720..1293940 + 406 145598446 - YPDSF_1151 - imidazolonepropionase 1124 52.79 0 1294031..1295053 + 340 145598447 - YPDSF_1152 - transposase 1125 50.38 0 1295053..1295832 + 259 145598448 - YPDSF_1153 - transposase/IS protein 1126 48.89 0 1295848..1296702 + 284 145598449 - YPDSF_1154 - N-formylglutamate amidohydrolase 1127 49.55 0 1296763..1297971 - 402 145598450 - YPDSF_1155 - transposase for the IS285 insertion element 1128 44.51 0 1298434..1299516 - 360 145598451 - YPDSF_1156 - hypothetical protein 1129 48.04 0 1300252..1301244 - 330 145598452 - YPDSF_1157 - succinylglutamate desuccinylase 1130 50.45 0 1301305..1302648 - 447 145598453 - YPDSF_1158 - succinylarginine dihydrolase 1131 53.56 +1 1302672..1304189 - 505 145598454 - YPDSF_1159 - succinylglutamic semialdehyde dehydrogenase 1132 50.71 0 1304186..1305238 - 350 145598455 - YPDSF_1160 - arginine succinyltransferase 1133 51.23 0 1305268..1306608 - 446 145598456 - YPDSF_1161 - bifunctional succinylornithine transaminase/acetylornithine transaminase 1134 51.41 0 1307149..1308570 - 473 145598457 - YPDSF_1162 - GntR family regulatory protein 1135 46.91 0 1308880..1310661 + 593 145598458 - YPDSF_1163 - nitrate/nitrite sensor protein NarX 1136 49.47 0 1311346..1312287 + 313 145598459 - YPDSF_1164 - calcium/sodium:proton antiporter 1137 48.67 0 1312390..1313178 - 262 145598460 - YPDSF_1165 - hypothetical protein 1138 43.16 -1 1313238..1313522 - 94 145598461 - YPDSF_1166 - hypothetical protein 1139 44.73 0 1313955..1314665 - 236 145598462 - YPDSF_1167 - acetyltransferase 1140 50.00 0 1315187..1315654 - 155 145598463 - YPDSF_1168 - haemin storage system, HmsS protein 1141 50.95 0 1315651..1317024 - 457 145598464 - YPDSF_1169 - N-glycosyltransferase PgaC 1142 47.48 0 1316975..1318996 - 673 145598465 - YPDSF_1170 - haemin storage system, HmsF protein 1143 48.12 0 1319009..1321477 - 822 145598466 - YPDSF_1171 - outer membrane protein PgaA 1144 45.57 0 1322146..1323363 - 405 145598467 - YPDSF_1172 - peptidase 1145 45.05 0 1323504..1324391 - 295 145598468 - YPDSF_1173 - tellurite resistance protein TehB 1146 45.71 0 1324564..1324878 - 104 145598469 - YPDSF_1174 - cytochrome 1147 46.70 0 1324875..1325405 - 176 145598470 - YPDSF_1175 - thioredoxin 1148 47.34 0 1325362..1326075 - 237 145598471 - YPDSF_1176 - ABC transporter, ATP-binding protein 1149 49.23 0 1326079..1327242 - 387 145598472 - YPDSF_1177 - membrane protein 1150 52.90 +1 1327232..1328524 - 430 145598473 - YPDSF_1178 - membrane protein 1151 49.08 0 1328527..1329936 - 469 145598474 - YPDSF_1179 - membrane protein 1152 45.45 0 1330221..1330748 - 175 145598475 - YPDSF_1180 - hypothetical protein 1153 52.10 0 1333442..1335082 - 546 145598476 - YPDSF_1183 - membrane protein 1154 49.80 0 1335193..1336200 - 335 145598477 - YPDSF_1184 - glutaminase 1155 46.86 0 1336652..1336858 - 68 145598478 - YPDSF_1185 - hydroxypyruvate isomerase 1156 50.06 0 1337411..1338181 + 256 145598479 - YPDSF_1186 - DeoR family transcriptional regulator 1157 48.04 0 1338903..1340432 + 509 145598480 - YPDSF_1187 - L-asparagine permease 1158 47.29 0 1340628..1341788 - 386 145598481 - YPDSF_1188 - aminotransferase 1159 41.17 -1 1342140..1342739 + 199 145598482 - YPDSF_1189 - Na(+)-translocating NADH-quinone reductase subunit E 1160 50.57 0 1343044..1344006 - 320 145598483 - YPDSF_1190 - LysR family transcriptional regulator 1161 50.11 0 1344118..1344987 + 289 145598484 - YPDSF_1191 - dicarboxylic acid hydrolase 1162 50.73 0 1345053..1346282 + 409 145598485 - YPDSF_1192 - sugar transporter 1163 38.50 -1 1346502..1347062 + 186 145598486 - YPDSF_1193 - hypothetical protein 1164 41.35 -1 1347087..1347560 + 157 145598487 - YPDSF_1194 - lipoprotein 1165 50.96 0 1347635..1348519 - 294 145598488 - YPDSF_1195 - LysR family transcriptional regulator 1166 53.62 +1 1348608..1349450 + 280 145598489 - YPDSF_1196 - citrate lyase beta chain 1167 51.52 0 1349515..1350042 + 175 145598490 - YPDSF_1197 - transcription regulatory protein 1168 50.42 0 1350065..1351387 + 440 145598491 - YPDSF_1198 - 4-hydroxybutyrate coenzyme A transferase 1169 40.13 -1 1352213..1352845 + 210 145598492 - YPDSF_1199 - two-component response regulator 1170 46.78 0 1352820..1356821 + 1333 145598493 - YPDSF_1200 - signal transduction histidine kinase 1171 48.59 0 1357202..1357732 + 176 145598494 - YPDSF_1201 - fimbrial protein 1172 42.48 -1 1357825..1358469 + 214 145598495 - YPDSF_1202 - pili assembly chaperone 1173 49.50 0 1358518..1361109 + 863 145598496 - YPDSF_1203 - fimbrial usher protein 1174 47.63 0 1361125..1362474 + 449 145598497 - YPDSF_1204 - hypothetical protein 1175 44.64 0 1362471..1362983 + 170 145598498 - YPDSF_1205 - pili assembly chaperone 1176 49.55 0 1363045..1364253 + 402 145598499 - YPDSF_1206 - transposase for the IS285 insertion element 1177 43.02 -1 1364277..1364534 + 85 145598500 - YPDSF_1207 - pili assembly chaperone 1178 52.65 0 1365074..1366336 + 420 145598501 - YPDSF_1208 - integrase 1179 55.25 +1 1366530..1367834 - 434 145598502 - YPDSF_1209 - salicylate synthase Irp9 1180 59.83 +2 1367862..1369250 - 462 145598503 - YPDSF_1210 - signal transducer 1181 58.62 +2 1369135..1370937 - 600 145598504 - YPDSF_1211 - inner membrane ABC-transporter YbtQ 1182 57.85 +2 1370924..1372636 - 570 145598505 - YPDSF_1212 - lipoprotein inner membrane ABC-transporter 1183 56.35 +1 1372893..1373852 + 319 145598506 - YPDSF_1213 - transcriptional regulator YbtA 1184 60.15 +2 1374043..1380150 + 2035 145598507 - YPDSF_1214 - yersiniabactin biosynthetic protein 1185 60.78 +2 1380238..1389729 + 3163 145598508 - YPDSF_1215 - yersiniabactin biosynthetic protein 1186 60.40 +2 1389726..1390826 + 366 145598509 - YPDSF_1216 - yersiniabactin biosynthetic protein YbtU 1187 58.43 +2 1390838..1391626 + 262 145598510 - YPDSF_1217 - yersiniabactin biosynthetic protein YbtT 1188 58.81 +2 1391630..1393207 + 525 145598511 - YPDSF_1218 - yersiniabactin siderophore biosynthetic protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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