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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 997 48.15 0 1156895..1157623 - 242 145598320 - YPDSF_1023 - hypothetical protein 998 48.29 0 1157623..1159113 - 496 145598321 - YPDSF_1024 - hypothetical protein 999 47.33 0 1159123..1159572 - 149 145598322 - YPDSF_1025 - hypothetical protein 1000 47.96 0 1159603..1160238 - 211 145598323 - YPDSF_1026 - hypothetical protein 1001 47.76 0 1160695..1161408 - 237 145598324 - YPDSF_1027 - phage regulatory protein 1002 50.76 0 1161954..1162412 - 152 145598325 - YPDSF_1028 - prophage endopeptidase 1003 51.07 0 1162397..1162909 - 170 145598326 - YPDSF_1029 - phage lysozyme 1004 45.98 0 1163655..1163828 - 57 145598327 - YPDSF_1030 - hypothetical protein 1005 42.91 -1 1164288..1164851 - 187 145598328 - YPDSF_1031 - hypothetical protein 1006 43.85 0 1165122..1165511 - 129 145598329 - YPDSF_1032 - phage antitermination protein 1007 47.03 0 1165512..1166117 - 201 145598330 - YPDSF_1033 - hypothetical protein 1008 50.56 0 1166191..1166637 - 148 145598331 - YPDSF_1034 - hypothetical protein 1009 50.23 0 1166718..1167362 + 214 145598332 - YPDSF_1035 - methyltransferase 1010 50.38 0 1168090..1168869 - 259 145598333 - YPDSF_1036 - transposase/IS protein 1011 52.79 0 1168869..1169891 - 340 145598334 - YPDSF_1037 - transposase for insertion sequence IS100 1012 49.07 0 1169961..1171199 + 412 145598335 - YPDSF_1038 - hypothetical protein 1013 44.07 0 1171226..1171672 - 148 145598336 - YPDSF_1039 - hypothetical protein 1014 47.34 0 1171775..1172431 - 218 145598337 - YPDSF_1040 - hypothetical protein 1015 46.59 0 1172502..1173587 - 361 145598338 - YPDSF_1041 - lipoprotein 1016 43.59 0 1173728..1174000 - 90 145598339 - YPDSF_1042 - hypothetical protein 1017 47.60 0 1174721..1175407 + 228 145598340 minC YPDSF_1043 - septum formation inhibitor 1018 46.86 0 1175432..1176244 + 270 145598341 - YPDSF_1044 - cell division inhibitor MinD 1019 44.81 0 1176248..1176517 + 89 145598342 minE YPDSF_1045 - cell division topological specificity factor MinE 1020 47.72 0 1176754..1177914 - 386 145598343 - YPDSF_1046 - ribonuclease D 1021 48.32 0 1178035..1179756 - 573 145598344 - YPDSF_1047 - long-chain-fatty-acid--CoA ligase 1022 54.94 +1 1181103..1181801 - 232 145598345 - YPDSF_1050 - hypothetical protein 1023 50.66 0 1181873..1183777 - 634 145598346 - YPDSF_1051 - DEAD box family helicase 1024 48.70 0 1183908..1184252 + 114 145598347 - YPDSF_1052 - hypothetical protein 1025 47.58 0 1184384..1184713 - 109 145598348 - YPDSF_1053 - multidrug efflux system protein MdtI 1026 46.17 0 1184700..1185143 - 147 145598349 - YPDSF_1054 - integral membrane protein 1027 51.87 0 1185858..1186499 - 213 145598350 - YPDSF_1055 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1028 48.42 0 1186741..1188225 - 494 145598351 - YPDSF_1056 - glucose-6-phosphate 1-dehydrogenase 1029 46.10 0 1188422..1189447 + 341 145598352 - YPDSF_1057 - DNA-binding transcriptional regulator HexR 1030 50.24 0 1189777..1191219 + 480 145598353 - YPDSF_1058 - pyruvate kinase 1031 46.94 0 1191559..1192521 - 320 145598354 - YPDSF_1059 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1032 48.75 0 1192788..1194104 - 438 145598355 - YPDSF_1060 - hypothetical protein 1033 44.83 0 1194125..1195081 - 318 145598356 znuA YPDSF_1061 - high-affinity zinc transporter periplasmic component 1034 49.08 0 1195154..1195915 + 253 145598357 znuC YPDSF_1062 - high-affinity zinc transporter ATPase 1035 51.65 0 1195912..1196697 + 261 145598358 znuB YPDSF_1063 - high-affinity zinc transporter membrane component 1036 50.35 0 1196752..1197756 - 334 145598359 ruvB YPDSF_1064 - Holliday junction DNA helicase B 1037 50.07 0 1197918..1198598 - 226 145598360 ruvA YPDSF_1065 - Holliday junction DNA helicase motor protein 1038 50.77 0 1198815..1199336 - 173 145598361 ruvC YPDSF_1066 - Holliday junction resolvase 1039 49.06 0 1199545..1200288 - 247 145598362 - YPDSF_1067 - hypothetical protein 1040 52.03 0 1200346..1200789 - 147 145598363 ntpA YPDSF_1068 - dATP pyrophosphohydrolase 1041 51.03 0 1200789..1202585 - 598 145598364 aspS YPDSF_1069 - aspartyl-tRNA synthetase 1042 51.23 0 1203519..1204334 + 271 145598365 - YPDSF_1070 - hypothetical protein 1043 43.94 0 1204514..1204909 + 131 145598366 - YPDSF_1071 - hypothetical protein 1044 49.00 0 1205100..1205903 + 267 145598367 - YPDSF_1072 - hypothetical protein 1045 52.57 0 1205900..1206871 + 323 145598368 - YPDSF_1073 - hypothetical protein 1046 49.15 0 1207064..1207828 - 254 145598369 - YPDSF_1074 - copper homeostasis protein CutC 1047 47.22 0 1208060..1208635 - 191 145598370 - YPDSF_1075 - hypothetical protein 1048 43.45 0 1208665..1208832 + 55 145598371 - YPDSF_1076 - hypothetical protein 1049 49.91 0 1209234..1210964 + 576 145598372 argS YPDSF_1077 - arginyl-tRNA synthetase 1050 41.47 -1 1211195..1215805 - 1536 145598373 - YPDSF_1078 - hemolysin 1051 36.76 -2 1215955..1217616 - 553 145598374 - YPDSF_1079 - hemolysin activator protein 1052 50.98 0 1218072..1219607 - 511 145598375 - YPDSF_1080 - membrane protein 1053 49.72 0 1219874..1221484 - 536 145598376 - YPDSF_1081 - oxidoreductase 1054 48.38 0 1221492..1222076 - 194 145598377 - YPDSF_1082 - ribosomal-protein-S5-alanine N-acetyltransferase 1055 52.49 0 1222370..1223575 + 401 145598378 - YPDSF_1083 - multidrug resistance protein MdtH 1056 45.21 0 1223970..1224533 + 187 145598379 - YPDSF_1084 - hypothetical protein 1057 50.62 0 1224987..1225547 - 186 145598380 - YPDSF_1085 - hypothetical protein 1058 50.27 0 1225584..1226321 - 245 145598381 - YPDSF_1086 - putative hydrolase 1059 55.35 +1 1226956..1228068 - 370 145598382 - YPDSF_1087 - transcriptional regulatory protein 1060 52.71 0 1228082..1228912 - 276 145598383 - YPDSF_1088 - hypothetical protein 1061 51.46 0 1229112..1229453 + 113 145598384 - YPDSF_1089 - ABC transporter, ATP-binding subunit 1062 45.75 0 1229541..1229999 - 152 145598385 - YPDSF_1090 - transposase for the IS1541 insertion element 1063 53.64 +1 1229999..1230904 + 301 145598386 - YPDSF_1091 - hypothetical protein 1064 53.75 +1 1230901..1231767 + 288 145598387 - YPDSF_1092 - binding-protein-dependent transport system membrane protein 1065 52.33 0 1231764..1232600 + 278 145598388 - YPDSF_1093 - binding-protein-dependent transport system membrane protein 1066 51.06 0 1232620..1233702 + 360 145598389 - YPDSF_1094 - hypothetical protein 1067 43.04 -1 1234003..1234878 + 291 145598390 - YPDSF_1095 - hypothetical protein 1068 52.00 0 1235945..1237642 + 565 145598391 - YPDSF_1096 - putative sulfate transporter YchM 1069 50.18 0 1238119..1238973 - 284 145598392 - YPDSF_1097 - 2-dehydro-3-deoxyphosphooctonate aldolase 1070 48.27 0 1239069..1239878 - 269 145598393 - YPDSF_1098 - putative transcriptional regulator 1071 43.28 0 1239875..1240276 - 133 145598394 - YPDSF_1099 - hypothetical protein 1072 53.55 +1 1240340..1241170 - 276 145598395 - YPDSF_1100 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1073 51.43 0 1241170..1242252 - 360 145598396 prfA YPDSF_1101 - peptide chain release factor 1 1074 50.19 0 1242285..1243601 - 438 145598397 hemA YPDSF_1102 - glutamyl-tRNA reductase 1075 47.76 0 1243853..1244476 + 207 145598398 lolB YPDSF_1103 - outer membrane lipoprotein LolB 1076 49.22 0 1244478..1245377 + 299 145598399 - YPDSF_1104 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1077 49.70 0 1244624..1245448 - 274 145598400 - YPDSF_1105 - hypothetical protein 1078 50.00 0 1245718..1246665 + 315 145598401 - YPDSF_1106 - ribose-phosphate pyrophosphokinase 1079 46.52 0 1246867..1247139 - 90 145598402 - YPDSF_1107 - hypothetical protein 1080 47.18 0 1247471..1248091 + 206 145598403 - YPDSF_1108 - peptidyl-tRNA hydrolase 1081 49.54 0 1248255..1249346 + 363 145598404 - YPDSF_1109 - translation-associated GTPase 1082 45.86 0 1249559..1249957 + 132 145598405 - YPDSF_1110 - hypothetical protein 1083 50.78 0 1249975..1250484 + 169 145598406 - YPDSF_1111 - integrase core subunit 1084 41.35 -1 1250532..1250930 - 132 145598407 - YPDSF_1112 - rhodanese-like protein 1085 52.11 0 1250938..1251768 - 276 145598408 - YPDSF_1113 - putative esterase 1086 54.03 +1 1251765..1252421 - 218 145598409 - YPDSF_1114 - hypothetical protein 1087 46.03 0 1253052..1253894 + 280 145598410 - YPDSF_1115 - hypothetical protein 1088 41.67 -1 1254102..1254797 - 231 145598411 - YPDSF_1116 - hypothetical protein 1089 44.89 0 1254812..1255477 - 221 145598412 - YPDSF_1117 - flavodoxin 1090 47.34 0 1255668..1256759 - 363 145598413 - YPDSF_1118 - hypothetical protein 1091 51.23 0 1257024..1257347 + 107 145598414 - YPDSF_1119 - response regulator receiver 1092 52.79 0 1257374..1258396 + 340 145598415 - YPDSF_1120 - transposase 1093 50.38 0 1258396..1259175 + 259 145598416 - YPDSF_1121 - transposase/IS protein 1094 51.73 0 1259214..1259675 + 153 145598417 - YPDSF_1122 - transcriptional activator 1095 51.80 0 1259687..1261072 + 461 145598418 - YPDSF_1123 - two-component system sensor protein 1096 50.83 0 1261349..1261771 + 140 145598419 - YPDSF_1124 - decarboxylase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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