version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 954 45.06 0 1111432..1113366 + 644 145598277 - YPDSF_0980 - hypothetical protein 955 48.00 0 1113516..1114790 + 424 145598278 - YPDSF_0981 - hypothetical protein 956 51.03 0 1114898..1116016 + 372 145598279 - YPDSF_0982 - membrane protein 957 53.53 +1 1116051..1116956 - 301 145598280 - YPDSF_0983 - LysR family transcriptional regulator 958 48.62 0 1117154..1118023 + 289 145598281 - YPDSF_0984 - hypothetical protein 959 50.04 0 1118288..1119490 + 400 145598282 - YPDSF_0985 - multidrug resistance protein 960 52.64 0 1119506..1120810 - 434 145598283 - YPDSF_0986 - D-amino acid dehydrogenase small subunit 961 44.47 0 1121276..1122811 + 511 145598284 - YPDSF_0987 - hypothetical protein 962 46.25 0 1123029..1123748 - 239 145598285 - YPDSF_0988 - fatty acid metabolism regulator 963 46.54 0 1123992..1125566 + 524 145598286 nhaB YPDSF_0989 - sodium/proton antiporter 964 45.79 0 1125787..1126332 + 181 145598287 - YPDSF_0990 - disulfide bond formation protein B 965 43.98 0 1126749..1127105 - 118 145598288 - YPDSF_0991 - hypothetical protein 966 51.82 0 1128197..1128937 + 246 145598289 - YPDSF_0992 - hypothetical protein 967 52.33 0 1128954..1130153 + 399 145598290 - YPDSF_0993 - aminotransferase 968 54.81 +1 1130157..1131101 + 314 145598291 - YPDSF_0994 - hypothetical protein 969 51.92 0 1131174..1131329 + 51 145598292 - YPDSF_0995 - hypothetical protein 970 51.28 0 1131588..1131743 - 51 145598293 - YPDSF_0996 - hypothetical protein 971 41.43 -1 1131740..1132159 - 139 145598294 - YPDSF_0997 - phage tail fiber assembly protein 972 44.34 0 1132170..1133087 - 305 145598295 - YPDSF_0998 - hypothetical protein 973 44.28 0 1133104..1134117 - 337 145598296 - YPDSF_0999 - hypothetical protein 974 47.63 0 1134102..1137305 - 1067 145598297 - YPDSF_1000 - phage host specificity protein 975 49.92 0 1137877..1138497 - 206 145598298 - YPDSF_1001 - phage tail assembly protein 976 37.32 -2 1138911..1139462 - 183 145598299 - YPDSF_1002 - phage-related membrane protein 977 45.04 0 1139561..1140568 - 335 145598300 - YPDSF_1003 - hypothetical protein 978 40.56 -1 1140825..1141364 + 179 145598301 - YPDSF_1004 - phage regulatory protein 979 42.71 -1 1141443..1141634 - 63 145598302 - YPDSF_1005 - hypothetical protein 980 52.46 0 1142347..1143057 - 236 145598303 - YPDSF_1006 - phage minor tail protein 981 50.60 0 1143060..1143812 - 250 145598304 - YPDSF_1007 - hypothetical protein 982 45.97 0 1143932..1144390 - 152 145598305 - YPDSF_1008 - transposase for the IS1541 insertion element 983 45.75 0 1144642..1145100 - 152 145598306 - YPDSF_1009 - transposase for the IS1541 insertion element 984 52.92 +1 1145406..1145747 - 113 145598307 - YPDSF_1010 - hypothetical protein 985 46.67 0 1145750..1149265 - 1171 145598308 - YPDSF_1011 - phage tail protein 986 46.47 0 1149574..1149885 - 103 145598309 - YPDSF_1012 - hypothetical protein 987 50.05 0 1149898..1150818 - 306 145598310 - YPDSF_1013 - hypothetical protein 988 44.36 0 1150884..1151291 - 135 145598311 - YPDSF_1014 - hypothetical protein 989 46.32 0 1151288..1151872 - 194 145598312 - YPDSF_1015 - hypothetical protein 990 48.48 0 1151874..1152170 - 98 145598313 - YPDSF_1016 - hypothetical protein 991 41.57 -1 1152227..1152481 - 84 145598314 - YPDSF_1017 - hypothetical protein 992 46.52 0 1152478..1153008 - 176 145598315 - YPDSF_1018 - hypothetical protein 993 49.42 0 1153008..1154213 - 401 145598316 - YPDSF_1019 - hypothetical protein 994 50.78 0 1154227..1155000 - 257 145598317 - YPDSF_1020 - hypothetical protein 995 49.06 0 1155122..1156234 - 370 145598318 - YPDSF_1021 - hypothetical protein 996 50.78 0 1156235..1156876 - 213 145598319 - YPDSF_1022 - hypothetical protein 997 48.15 0 1156895..1157623 - 242 145598320 - YPDSF_1023 - hypothetical protein 998 48.29 0 1157623..1159113 - 496 145598321 - YPDSF_1024 - hypothetical protein 999 47.33 0 1159123..1159572 - 149 145598322 - YPDSF_1025 - hypothetical protein 1000 47.96 0 1159603..1160238 - 211 145598323 - YPDSF_1026 - hypothetical protein 1001 47.76 0 1160695..1161408 - 237 145598324 - YPDSF_1027 - phage regulatory protein 1002 50.76 0 1161954..1162412 - 152 145598325 - YPDSF_1028 - prophage endopeptidase 1003 51.07 0 1162397..1162909 - 170 145598326 - YPDSF_1029 - phage lysozyme 1004 45.98 0 1163655..1163828 - 57 145598327 - YPDSF_1030 - hypothetical protein 1005 42.91 -1 1164288..1164851 - 187 145598328 - YPDSF_1031 - hypothetical protein 1006 43.85 0 1165122..1165511 - 129 145598329 - YPDSF_1032 - phage antitermination protein 1007 47.03 0 1165512..1166117 - 201 145598330 - YPDSF_1033 - hypothetical protein 1008 50.56 0 1166191..1166637 - 148 145598331 - YPDSF_1034 - hypothetical protein 1009 50.23 0 1166718..1167362 + 214 145598332 - YPDSF_1035 - methyltransferase 1010 50.38 0 1168090..1168869 - 259 145598333 - YPDSF_1036 - transposase/IS protein 1011 52.79 0 1168869..1169891 - 340 145598334 - YPDSF_1037 - transposase for insertion sequence IS100 1012 49.07 0 1169961..1171199 + 412 145598335 - YPDSF_1038 - hypothetical protein 1013 44.07 0 1171226..1171672 - 148 145598336 - YPDSF_1039 - hypothetical protein 1014 47.34 0 1171775..1172431 - 218 145598337 - YPDSF_1040 - hypothetical protein 1015 46.59 0 1172502..1173587 - 361 145598338 - YPDSF_1041 - lipoprotein 1016 43.59 0 1173728..1174000 - 90 145598339 - YPDSF_1042 - hypothetical protein 1017 47.60 0 1174721..1175407 + 228 145598340 minC YPDSF_1043 - septum formation inhibitor 1018 46.86 0 1175432..1176244 + 270 145598341 - YPDSF_1044 - cell division inhibitor MinD 1019 44.81 0 1176248..1176517 + 89 145598342 minE YPDSF_1045 - cell division topological specificity factor MinE 1020 47.72 0 1176754..1177914 - 386 145598343 - YPDSF_1046 - ribonuclease D 1021 48.32 0 1178035..1179756 - 573 145598344 - YPDSF_1047 - long-chain-fatty-acid--CoA ligase 1022 54.94 +1 1181103..1181801 - 232 145598345 - YPDSF_1050 - hypothetical protein 1023 50.66 0 1181873..1183777 - 634 145598346 - YPDSF_1051 - DEAD box family helicase 1024 48.70 0 1183908..1184252 + 114 145598347 - YPDSF_1052 - hypothetical protein 1025 47.58 0 1184384..1184713 - 109 145598348 - YPDSF_1053 - multidrug efflux system protein MdtI 1026 46.17 0 1184700..1185143 - 147 145598349 - YPDSF_1054 - integral membrane protein 1027 51.87 0 1185858..1186499 - 213 145598350 - YPDSF_1055 - keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase 1028 48.42 0 1186741..1188225 - 494 145598351 - YPDSF_1056 - glucose-6-phosphate 1-dehydrogenase 1029 46.10 0 1188422..1189447 + 341 145598352 - YPDSF_1057 - DNA-binding transcriptional regulator HexR 1030 50.24 0 1189777..1191219 + 480 145598353 - YPDSF_1058 - pyruvate kinase 1031 46.94 0 1191559..1192521 - 320 145598354 - YPDSF_1059 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1032 48.75 0 1192788..1194104 - 438 145598355 - YPDSF_1060 - hypothetical protein 1033 44.83 0 1194125..1195081 - 318 145598356 znuA YPDSF_1061 - high-affinity zinc transporter periplasmic component 1034 49.08 0 1195154..1195915 + 253 145598357 znuC YPDSF_1062 - high-affinity zinc transporter ATPase 1035 51.65 0 1195912..1196697 + 261 145598358 znuB YPDSF_1063 - high-affinity zinc transporter membrane component 1036 50.35 0 1196752..1197756 - 334 145598359 ruvB YPDSF_1064 - Holliday junction DNA helicase B 1037 50.07 0 1197918..1198598 - 226 145598360 ruvA YPDSF_1065 - Holliday junction DNA helicase motor protein 1038 50.77 0 1198815..1199336 - 173 145598361 ruvC YPDSF_1066 - Holliday junction resolvase 1039 49.06 0 1199545..1200288 - 247 145598362 - YPDSF_1067 - hypothetical protein 1040 52.03 0 1200346..1200789 - 147 145598363 ntpA YPDSF_1068 - dATP pyrophosphohydrolase 1041 51.03 0 1200789..1202585 - 598 145598364 aspS YPDSF_1069 - aspartyl-tRNA synthetase 1042 51.23 0 1203519..1204334 + 271 145598365 - YPDSF_1070 - hypothetical protein 1043 43.94 0 1204514..1204909 + 131 145598366 - YPDSF_1071 - hypothetical protein 1044 49.00 0 1205100..1205903 + 267 145598367 - YPDSF_1072 - hypothetical protein 1045 52.57 0 1205900..1206871 + 323 145598368 - YPDSF_1073 - hypothetical protein 1046 49.15 0 1207064..1207828 - 254 145598369 - YPDSF_1074 - copper homeostasis protein CutC 1047 47.22 0 1208060..1208635 - 191 145598370 - YPDSF_1075 - hypothetical protein 1048 43.45 0 1208665..1208832 + 55 145598371 - YPDSF_1076 - hypothetical protein 1049 49.91 0 1209234..1210964 + 576 145598372 argS YPDSF_1077 - arginyl-tRNA synthetase 1050 41.47 -1 1211195..1215805 - 1536 145598373 - YPDSF_1078 - hemolysin 1051 36.76 -2 1215955..1217616 - 553 145598374 - YPDSF_1079 - hemolysin activator protein 1052 50.98 0 1218072..1219607 - 511 145598375 - YPDSF_1080 - membrane protein 1053 49.72 0 1219874..1221484 - 536 145598376 - YPDSF_1081 - oxidoreductase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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