version 1.0
Yersinia enterocolitica subsp. enterocolitica 8081, complete genome - 1..4615899 3979 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3880 44.12 0 4497889..4498296 - 135 123444283 - YE4110 - hypothetical protein 3881 52.13 0 4498512..4498793 - 93 123444284 - YE4111 - hypothetical protein 3882 32.97 -2 4499404..4500513 + 369 123444285 - YE4112 - hypothetical protein 3883 46.34 0 4502800..4504014 - 404 123444286 - YE4117 - putative phage integrase 3884 49.08 0 4504402..4505595 - 397 123444287 - YE4118 - AraC family transcriptional regulator 3885 51.31 0 4505679..4506863 - 394 123444288 - YE4119 - sugar transport system permease protein 3886 47.36 0 4506850..4508382 - 510 123444289 - YE4120 - xylose transporter ATP-binding subunit 3887 40.56 -1 4508475..4509470 - 331 123444290 xylF YE4121 - D-xylose transporter subunit XylF 3888 46.74 0 4509849..4511168 + 439 123444291 xylA YE4122 - xylose isomerase 3889 52.53 +1 4511318..4512880 + 520 123444292 xylB YE4123 - xylulose kinase 3890 44.14 0 4512828..4513595 - 255 123444293 - YE4123A - putative fimbrial chaperone 3891 50.05 0 4513765..4514859 + 364 123444294 - YE4124 - isochorismatase family hydrolase 3892 53.51 +1 4514862..4515788 + 308 123444295 - YE4125 - putative transcriptional regulator 3893 46.83 0 4515781..4516773 - 330 123444296 - YE4126 - hypothetical protein 3894 52.03 0 4517024..4518253 + 409 123444297 cmr YE4127 - multidrug translocase 3895 42.19 -1 4518288..4519541 - 417 123444298 - YE4128 - hypothetical protein 3896 44.23 0 4519545..4519856 - 103 123444299 - YE4129 - hypothetical protein 3897 52.61 +1 4520019..4521911 - 630 123444300 selB YE4130 - selenocysteinyl-tRNA-specific translation factor 3898 54.50 +1 4521908..4523296 - 462 123444301 fdhA YE4131 - selenocysteine synthase 3899 49.35 0 4523328..4524257 - 309 123444302 fdhE YE4132 - formate dehydrogenase accessory protein FdhE 3900 49.00 0 4524257..4524907 - 216 123444303 fdoI YE4133 - formate dehydrogenase-O subunit gamma 3901 54.84 +1 4524904..4525875 - 323 123444304 fdoH YE4134 - formate dehydrogenase-O, iron-sulfur subunit 3902 52.36 0 4525888..4528935 - 1014 123444305 fdoG YE4135 - formate dehydrogenase-o, major subunit 3903 51.81 0 4529146..4529973 + 275 123444306 fdhD YE4137 - formate dehydrogenase accessory protein 3904 50.96 0 4530100..4530723 + 207 123444307 sodA YE4138 - superoxide dismutase 3905 47.38 0 4531081..4533030 + 649 123444308 cheM YE4139 - methyl-accepting chemotaxis protein II 3906 50.15 0 4533109..4533780 + 223 123444309 - YE4140 - hypothetical protein 3907 36.19 -2 4533934..4534353 - 139 123444310 - YE4141 - hypothetical protein 3908 43.86 0 4534350..4534748 - 132 123444311 - YE4142 - hypothetical protein 3909 46.50 0 4534879..4535235 - 118 123444312 - YE4143 - hypothetical protein 3910 54.45 +1 4535328..4536809 - 493 123444313 - YE4144 - putative transcriptional regulator 3911 48.23 0 4536915..4537565 + 216 123444314 - YE4145 - putative inner membrane protein 3912 48.11 0 4537562..4538116 - 184 123444315 mtlR YE4146 - mannitol repressor protein 3913 51.29 0 4538231..4539394 - 387 123444316 mtlD YE4147 - mannitol-1-phosphate 5-dehydrogenase 3914 50.70 0 4539627..4541549 - 640 123444317 mtlA YE4148 - PTS system, mannitol-specific IIABC component 3915 47.36 0 4542569..4543288 - 239 123444318 yiaF YE4149 - hypothetical protein 3916 50.97 0 4543536..4545605 - 689 123444319 glyS YE4150 - glycyl-tRNA synthetase subunit beta 3917 51.80 0 4545615..4546529 - 304 123444320 glyQ YE4151 - glycyl-tRNA synthetase subunit alpha 3918 48.87 0 4546786..4547358 + 190 123444321 tag YE4152 - DNA-3-methyladenine glycosylase 3919 50.00 0 4547355..4547810 + 151 123444322 - YE4153 - hypothetical protein 3920 46.25 0 4547924..4549378 + 484 123444323 - YE4154 - hypothetical protein 3921 42.31 -1 4549470..4551641 + 723 123444324 - YE4155 - hypothetical protein 3922 55.76 +1 4551867..4552526 + 219 123444325 yiaD YE4156 - putative outer membrane lipoprotein 3923 52.87 +1 4552603..4553247 - 214 123444326 - YE4157 - hypothetical protein 3924 52.50 +1 4553427..4554887 + 486 123444327 - YE4158 - putative transport protein 3925 52.40 0 4555157..4556137 + 326 123444328 - YE4159 - putative D-isomer specific 2-hydroxyacid dehydrogenase 3926 50.65 0 4556286..4558352 + 688 123444329 malS YE4160 - periplasmic alpha-amylase precursor 3927 49.44 0 4558487..4559740 + 417 123444330 avtA YE4161 - valine--pyruvate transaminase 3928 51.60 0 4559886..4561544 - 552 123444331 yidE YE4162 - hypothetical protein 3929 45.57 0 4561809..4562282 - 157 123444332 hslS YE4163 - heat shock chaperone IbpB 3930 40.82 -1 4562407..4562820 - 137 123444333 hslT YE4164 - heat shock protein IbpA 3931 53.98 +1 4563203..4563541 + 112 123444334 - YE4165 - hypothetical protein 3932 52.61 +1 4563543..4564844 - 433 123444335 - YE4166 - hypothetical protein 3933 49.90 0 4564986..4565945 + 319 123444336 - YE4167 - hypothetical protein 3934 48.46 0 4565942..4566880 + 312 123444337 - YE4168 - ornithine cyclodeaminase 3935 47.04 0 4567039..4567848 - 269 123444338 - YE4169 - sugar phosphatase 3936 49.15 0 4568018..4570432 - 804 123444339 gyrB YE4170 - DNA gyrase subunit B 3937 51.57 0 4570452..4571537 - 361 123444340 recF YE4171 - recombination protein F 3938 50.77 0 4571700..4572800 - 366 123444341 dnaN YE4172 - DNA polymerase III subunit beta 3939 48.31 0 4572805..4574193 - 462 123444342 dnaA YE4173 - chromosomal replication initiation protein 3940 47.98 0 4574542..4574862 + 106 123444343 - YE4174 - hypothetical protein 3941 51.77 0 4574898..4575038 + 46 123444344 rpmH YE4175 - 50S ribosomal protein L34 3942 52.22 0 4575057..4575416 + 119 123444345 rnpA YE4176 - ribonuclease P 3943 48.76 0 4575640..4577286 + 548 123444346 yidC YE4177 - putative inner membrane protein translocase component YidC 3944 50.84 0 4577454..4578818 + 454 123444347 trmE YE4178 - tRNA modification GTPase TrmE 3945 49.00 0 4578927..4580126 + 399 123444348 - YE4179 - trans-2-enoyl-CoA reductase 3946 40.07 -1 4580352..4581167 + 271 123444349 - YE4180 - hypothetical protein 3947 40.90 -1 4581179..4582195 + 338 123444350 - YE4181 - ABC transporter 3948 44.29 0 4582192..4582857 + 221 123444351 - YE4182 - ABC transporter permease 3949 46.71 0 4583178..4585136 - 652 123444352 - YE4183 - putative methyl-accepting chemotaxis receptor protein 3950 48.52 0 4585342..4585914 + 190 123444353 ssuE YE4184 - putative NAD(P)H-dependent FMN reductase 3951 50.07 0 4586022..4587371 + 449 123444354 - YE4185 - two-component sensor kinase 3952 49.64 0 4587397..4587948 + 183 123444355 - YE4186 - two-component response regulator 3953 53.46 +1 4588307..4588798 + 163 123444356 - YE4187 - hypothetical protein 3954 51.39 0 4588884..4590212 - 442 123444357 yieG YE4188 - xanthine/uracil permease family protein 3955 48.88 0 4590482..4591150 + 222 123444358 - YE4189 - 6-phosphogluconate phosphatase 3956 48.41 0 4591147..4591902 - 251 123444359 - YE4190 - putative amino acid transport system permease 3957 50.68 0 4591904..4592641 - 245 123444360 - YE4191 - ABC transporter permease 3958 44.09 0 4592871..4593725 - 284 123444361 - YE4193 - putative periplasmic solute-binding protein 3959 31.40 -2 4594015..4595205 + 396 123444362 - YE4194 - tyrosine phosphatase 3960 41.89 -1 4595275..4595613 + 112 123444363 - YE4195 - hypothetical protein 3961 46.61 0 4595724..4596446 - 240 123444364 nmpA YE4196 - transcriptional regulator PhoU 3962 46.07 0 4596616..4597392 - 258 123444365 phoT YE4198 - phosphate transporter subunit 3963 49.10 0 4597494..4598381 - 295 123444366 pstA YE4199 - phosphate transporter permease subunit 3964 48.90 0 4598383..4599339 - 318 123444367 pstC YE4200 - phosphate transporter permease subunit 3965 47.84 0 4599524..4600564 - 346 123444368 phoS YE4201 - phosphate transporter subunit 3966 29.48 -2 4600837..4601199 + 120 123444369 - YE4202 - hypothetical protein 3967 48.42 0 4601322..4603151 - 609 123444370 glmS YE4203 - D-fructose-6-phosphate amidotransferase 3968 48.36 0 4603358..4604728 - 456 123444371 glmU YE4204 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3969 48.23 0 4605243..4605665 - 140 123444372 atpC YE4205 - F0F1 ATP synthase subunit epsilon 3970 51.41 0 4605687..4607069 - 460 123444373 atpD YE4206 - F0F1 ATP synthase subunit beta 3971 50.12 0 4607226..4608089 - 287 123444374 atpG YE4207 - F0F1 ATP synthase subunit gamma 3972 51.17 0 4608151..4609692 - 513 123444375 atpA YE4208 - F0F1 ATP synthase subunit alpha 3973 50.19 0 4609707..4610240 - 177 123444376 atpH YE4209 - F0F1 ATP synthase subunit delta 3974 49.68 0 4610255..4610725 - 156 123444377 atpF YE4210 - F0F1 ATP synthase subunit B 3975 52.08 0 4610786..4611025 - 79 123444378 atpE YE4211 - F0F1 ATP synthase subunit C 3976 47.03 0 4611200..4612024 - 274 123444379 atpB YE4212 - F0F1 ATP synthase subunit A 3977 45.83 0 4612080..4612463 - 127 123444380 atpI YE4213 - F0F1 ATP synthase subunit I 3978 47.02 0 4613131..4613751 - 206 123444381 gidB YE4214 - glucose-inhibited division protein B 3979 48.52 0 4613899..4615788 - 629 123444382 gidA YE4215 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 47.74 MEAN 4.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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