version 1.0
Yersinia enterocolitica subsp. enterocolitica 8081, complete genome - 1..4615899 3979 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3324 46.22 0 3857315..3857989 - 224 123443727 spaP YE3542 - surface presentation of antigens protein SpaP 3325 50.69 0 3857992..3858930 - 312 123443728 ysaQ YE3542A - type III secretion apparatus protein 3326 51.12 0 3858930..3859997 - 355 123443729 - YE3543 - type III secretion protein 3327 47.15 0 3859969..3860424 - 151 123443730 - YE3543A - hypothetical protein 3328 53.13 +1 3860424..3861716 - 430 123443731 ysaN YE3544 - ATP synthase SpaL 3329 43.38 0 3861720..3862127 - 135 123443732 ysaK YE3545 - type III secretion sytem protein 3330 42.84 -1 3862139..3864211 - 690 123443733 ysaV YE3546 - type III secretion system apparatus protein 3331 47.48 0 3864208..3865317 - 369 123443734 ysaW YE3547 - type III secreted effector protein 3332 49.82 0 3865308..3866999 - 563 123443735 ysaC YE3548 - type III secretion system protein 3333 40.97 -1 3866989..3867669 - 226 123443736 ysaE YE3549 - AraC family transcription regulator 3334 46.26 0 3867949..3869178 + 409 123443737 - YE3550 - hypothetical protein 3335 43.69 0 3869209..3869517 + 102 123443738 - YE3551 - hypothetical protein 3336 44.88 0 3869576..3869878 + 100 123443739 ysaI YE3552 - putative virulence associated protein 3337 48.79 0 3869882..3870625 + 247 123443740 ysaJ YE3553 - type III secretion system apparatus lipoprotein 3338 53.55 +1 3870622..3871170 + 182 123443741 - YE3554 - hypothetical protein 3339 47.75 0 3871205..3871849 + 214 123443742 - YE3555 - hypothetical protein 3340 40.59 -1 3871917..3872288 + 123 123443743 - YE3556 - hypothetical protein 3341 42.77 -1 3872301..3872777 + 158 123443744 ysaH YE3557 - type III secretion system effector protein 3342 37.86 -2 3872952..3873437 + 161 123443745 - YE3558 - hypothetical protein 3343 36.09 -2 3873442..3873876 + 144 123443746 - YE3559 - hypothetical protein 3344 44.73 0 3873905..3874615 + 236 123443747 ysrR YE3560 - response regulator protein 3345 48.44 0 3874599..3876968 + 789 123443748 ysrS YE3561 - sensor kinase protein 3346 46.99 0 3876961..3877209 + 82 123443749 - YE3561A - hypothetical protein 3347 37.84 -2 3877682..3878191 + 169 123443750 - YE3562 - hypothetical protein 3348 36.01 -2 3878242..3878727 + 161 123443751 - YE3563 - hypothetical protein 3349 38.31 -2 3878724..3879266 + 180 123443752 yst1C YE3564 - general secretion pathway protein C 3350 46.18 0 3879335..3881311 + 658 123443753 - YE3565 - general secretion pathway protein D 3351 51.17 0 3881308..3882804 + 498 123443754 yst1E YE3566 - general secretion pathway protein E 3352 52.05 0 3882801..3884018 + 405 123443755 yst1F YE3567 - general secretion pathway protein F 3353 51.07 0 3884050..3884517 + 155 123443756 yst1G YE3568 - general secretion pathway protein G precursor 3354 49.65 0 3884517..3885086 + 189 123443757 yst1H YE3569 - general secretion pathway protein H 3355 51.79 0 3885092..3885454 + 120 123443758 yst1I YE3570 - general secretion pathway protein I precursor 3356 47.67 0 3885451..3886050 + 199 123443759 yst1J YE3570a - putative general secretion pathway protein J precursor 3357 47.69 0 3886040..3887077 + 345 123443760 yst1K YE3571 - putative general secretion pathway protein K 3358 48.08 0 3887079..3888278 + 399 123443761 yst1L YE3572 - putative general secretion pathway protein L 3359 49.29 0 3888265..3888759 + 164 123443762 yst1M YE3573 - putative general secretion pathway protein M 3360 47.96 0 3888768..3889553 + 261 123443763 yst1O YE3574 - type 4 prepilin-like proteins leader peptide processing enzyme 3361 46.27 0 3889575..3889976 - 133 123443764 yst1S YE3575 - putative secretion protein 3362 47.00 0 3890393..3891877 + 494 123443765 ChiY YE3576 - N-acetylglucosamine-binding protein A 3363 51.16 0 3892116..3893495 + 459 123443766 - YE3577 - hypothetical protein 3364 41.56 -1 3893711..3894415 + 234 123443767 - YE3578 - response regulator protein 3365 48.18 0 3894393..3896750 + 785 123443768 - YE3579 - sensor kinase protein 3366 46.44 0 3897562..3897828 + 88 123443769 - YE3581 - hypothetical protein 3367 49.49 0 3897825..3898610 + 261 123443770 map YE3582 - methionine aminopeptidase 3368 42.82 -1 3898753..3899511 - 252 123443771 - YE3583 - putative iron ABC transporter, ATP-binding protein 3369 46.23 0 3899508..3900515 - 335 123443772 - YE3584 - putative iron transport permease 3370 50.10 0 3900505..3901464 - 319 123443773 - YE3585 - putative iron transport permease 3371 48.11 0 3901474..3902427 - 317 123443774 - YE3586 - putative iron transport protein 3372 46.58 0 3902746..3903213 - 155 123443775 - YE3587 - putative O-methyltransferase 3373 52.28 0 3903486..3904889 + 467 123443776 - YE3588 - putative transporter protein 3374 49.61 0 3905083..3906102 + 339 123443777 - YE3589 - LacI family regulatory protein 3375 49.49 0 3906127..3907197 + 356 123443778 - YE3590 - putative hydrolase 3376 51.54 0 3907361..3908980 + 539 123443779 - YE3591 - putative Na+/Pi-cotransporter 3377 44.51 0 3909060..3909587 - 175 123443780 - YE3592 - isochorismatase family protein 3378 44.97 0 3909765..3910331 - 188 123443781 - YE3593 - hypothetical protein 3379 45.18 0 3910509..3912011 - 500 123443782 proP YE3594 - proline/glycine betaine transporter 3380 52.72 +1 3912249..3915374 - 1041 123443783 - YE3595 - putative integral membrane efflux protein 3381 50.62 0 3915387..3916589 - 400 123443784 - YE3596 - putative drug efflux protein 3382 48.42 0 3917096..3919594 + 832 123443785 - YE3597 - hypothetical protein 3383 41.37 -1 3919673..3920344 - 223 123443786 - YE3598 - hypothetical protein 3384 55.56 +1 3920539..3921321 - 260 123443787 thiM YE3599 - hydroxyethylthiazole kinase 3385 57.14 +1 3921409..3923685 - 758 123443788 hydA YE3600 - hydrogenase maturation protein 3386 56.35 +1 3923972..3924940 - 322 123443789 hypE YE3601 - hydrogenase isoenzymes formation protein 3387 55.53 +1 3925089..3926192 - 367 123443790 hypD YE3602 - hydrogenase isoenzymes formation protein 3388 54.04 +1 3926179..3926463 - 94 123443791 hybG YE3602A - hydrogenase 2 accessory protein HypG 3389 52.23 0 3926454..3927554 - 366 123443792 hypB YE3603 - hydrogenase isoenzymes nickel incorporation protein 3390 53.80 +1 3927575..3927916 - 113 123443793 hybF YE3603a - hydrogenase nickel incorporation protein HybF 3391 54.53 +1 3927909..3928427 - 172 123443794 hybE YE3604 - hydrogenase 2-specific chaperone 3392 55.28 +1 3928420..3928911 - 163 123443795 hybD YE3605 - hydrogenase 2 maturation endopeptidase 3393 54.16 +1 3928911..3930605 - 564 123443796 hybC YE3606 - hydrogenase 2 large subunit 3394 52.76 +1 3930583..3931776 - 397 123443797 hybB YE3607 - putative hydrogenase 2 b cytochrome subunit 3395 54.23 +1 3931769..3932797 - 342 123443798 hybA YE3608 - hydrogenase 2 protein HybA 3396 55.82 +1 3932800..3933915 - 371 123443799 hyb0 YE3609 - hydrogenase 2 small subunit 3397 55.98 +1 3934620..3935087 + 155 123443800 pcpY2 YE3610 - outer membrane lipoprotein 3398 31.68 -2 3937695..3938543 - 282 123443801 - YE3614 - putative lipase/acylhydrolase 3399 46.10 0 3939448..3941022 - 524 123443802 - YE3615 - putative methyl-accepting chemotaxis protein 3400 48.48 0 3941617..3942600 - 327 123443803 - YE3616 - hypothetical protein 3401 48.82 0 3942627..3943937 - 436 123443804 - YE3617 - putative membrane transport protein 3402 48.71 0 3944627..3945478 + 283 123443805 fepB YE3618 - iron-enterobactin transporter periplasmic binding protein 3403 54.15 +1 3945828..3946898 + 356 123443806 fepD YE3619 - iron-enterobactin transporter membrane protein 3404 53.93 +1 3946895..3947938 + 347 123443807 fepG YE3620 - iron-enterobactin transporter permease 3405 52.65 +1 3947905..3948753 + 282 123443808 fepC YE3621 - iron-siderophore transport system, ATP-binding component 3406 51.56 0 3948823..3950199 - 458 123443809 fes YE3622 - enterobactin/ferric enterobactin esterase 3407 58.33 +2 3950296..3950379 + 27 123443810 - YE3623 - hypothetical protein 3408 53.14 +1 3953098..3953511 + 137 123443811 - YE3626 - hypothetical protein 3409 49.74 0 3953586..3953975 + 129 123443812 - YE3627 - hypothetical protein 3410 55.58 +1 3953989..3955287 + 432 123443813 - YE3628 - outer membrane efflux protein 3411 52.68 +1 3955284..3956813 + 509 123443814 - YE3629 - putative efflux system protein 3412 52.27 0 3956810..3959941 + 1043 123443815 - YE3630 - putative cation efflux system protein 3413 49.85 0 3960008..3960673 - 221 123443816 aidD YE3631 - alkylated DNA repair protein 3414 41.50 -1 3961220..3961819 + 199 123443817 - YE3632 - membrane protein 3415 36.92 -2 3962020..3962214 + 64 123443818 flp YE3633 - pilin protein, major subunit 3416 40.66 -1 3962286..3962708 + 140 123443819 tadV YE3634 - putative tight adherance operon protein 3417 33.69 -2 3962753..3963586 + 277 123443820 rcpC YE3635 - putative tight adherance operon protein 3418 38.62 -1 3963583..3964944 + 453 123443821 rcpA YE3636 - putative tight adherance operon protein 3419 32.53 -2 3965213..3966331 + 372 123443822 tadZ YE3637 - putative tight adherance operon protein 3420 38.59 -1 3966363..3967637 + 424 123443823 tadA YE3638 - putative tight adherance operon protein 3421 31.91 -2 3967673..3968515 + 280 123443824 tadB YE3639 - putative tight adherance operon protein 3422 29.45 -2 3968512..3969336 + 274 123443825 tadC YE3640 - putative tight adherance operon protein 3423 34.90 -2 3969323..3970090 + 255 123443826 tadD YE3641 - putative tight adherance operon protein 47.74 MEAN 4.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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