version 1.0
Yersinia enterocolitica subsp. enterocolitica 8081, complete genome - 1..4615899 3979 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 247 44.67 0 297377..299008 + 543 123440650 ubiB YE0258 - putative ubiquinone biosynthesis protein UbiB 248 43.07 0 299209..299475 + 88 123440651 b3836 YE0259 - Sec-independent protein translocase protein TatA 249 50.38 0 299479..300135 + 218 123440652 mtta2 YE0260 - Sec-independent protein translocase protein TatB 250 42.56 -1 300138..300917 + 259 123440653 mttB YE0261 - TatABCE protein translocation system subunit 251 49.43 0 300973..301755 + 260 123440654 mttC YE0262 - DNase TatD 252 48.09 0 301770..302792 + 340 123440655 hemB YE0263 - delta-aminolevulinic acid dehydratase 253 42.74 -1 302881..303369 - 162 123440656 rfaH YE0264 - transcriptional activator RfaH 254 48.76 0 303638..305134 + 498 123440657 - YE0265 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 255 48.43 0 305189..305890 + 233 123440658 fre YE0266 - FMN reductase 256 52.41 0 305990..307153 - 387 123440659 fadA YE0267 - 3-ketoacyl-CoA thiolase 257 49.63 0 307165..309354 - 729 123440660 fadB YE0268 - multifunctional fatty acid oxidation complex subunit alpha 258 46.67 0 309626..310975 + 449 123440661 pepQ YE0269 - proline dipeptidase 259 49.24 0 311626..313077 + 483 123440662 trkH YE0272 - potassium transporter 260 46.82 0 313099..313632 + 177 123440663 hemG YE0273 - protoporphyrinogen oxidase 261 46.34 0 319709..320746 + 345 123440664 murB YE0274 - UDP-N-acetylenolpyruvoylglucosamine reductase 262 43.23 0 320743..321702 + 319 123440665 bioR YE0275 - biotin--protein ligase 263 41.96 -1 321742..322692 - 316 123440666 coaA YE0276 - pantothenate kinase 264 44.93 0 322902..323453 - 183 123440667 - YE0277 - putative acetyltransferase 265 48.02 0 324617..325801 + 394 123440668 tufA YE0278 - elongation factor Tu 266 50.26 0 326041..326424 + 127 123440669 secE YE0279 - preprotein translocase subunit SecE 267 48.35 0 326426..326971 + 181 123440670 nusG YE0280 - transcription antitermination protein NusG 268 47.79 0 327165..327593 + 142 123440671 rplK YE0281 - 50S ribosomal protein L11 269 48.23 0 327597..328301 + 234 123440672 rplA YE0282 - 50S ribosomal protein L1 270 50.00 0 328676..329179 + 167 123440673 rplJ YE0283 - 50S ribosomal protein L10 271 46.61 0 329248..329616 + 122 123440674 rplL YE0284 - 50S ribosomal protein L7/L12 272 49.76 0 329960..333988 + 1342 123440675 rpoB YE0286 - DNA-directed RNA polymerase subunit beta 273 51.41 0 334125..338345 + 1406 123440676 rpoC YE0287 - DNA-directed RNA polymerase subunit beta' 274 55.88 +1 338397..339731 - 444 123440677 - YE0288 - transposase for insertion sequence element IS1660 275 50.84 0 339869..340999 - 376 123440678 thiH YE0289 - thiamine biosynthesis protein ThiH 276 52.85 +1 340992..341780 - 262 123440679 thiG YE0290 - thiazole synthase 277 49.54 0 341782..341997 - 71 123440680 thiS YE0290A - sulfur carrier protein ThiS 278 52.62 +1 341994..342776 - 260 123440681 thiF YE0291 - thiamine biosynthesis protein 279 52.61 +1 342760..343371 - 203 123440682 thiE YE0292 - thiamine-phosphate pyrophosphorylase 280 50.34 0 343427..345313 - 628 123440683 thiC YE0293 - thiamine biosynthesis protein ThiC 281 44.05 0 345825..346328 - 167 123440684 rsd YE0295 - anti-RNA polymerase sigma 70 factor 282 51.53 0 346420..347205 + 261 123440685 nudC YE0296 - NADH pyrophosphatase 283 50.47 0 347286..348353 + 355 123440686 hemE YE0297 - uroporphyrinogen decarboxylase 284 51.63 0 348377..349081 + 234 123440687 nfi YE0298 - endonuclease V 285 44.84 0 349127..349717 + 196 123440688 - YE0299 - hypothetical protein 286 43.84 0 349906..350181 + 91 123440689 hupA YE0300 - transcriptional regulator HU subunit alpha 287 52.42 0 350186..350887 + 233 123440690 yjaH YE0301 - hypothetical protein 288 52.55 +1 350982..352277 - 431 123440691 purD YE0302 - phosphoribosylamine--glycine ligase 289 51.07 0 352303..353892 - 529 123440692 purH YE0303 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 290 50.79 0 360392..360706 + 104 123440693 - YE0304 - IS1669 hypothetical protein 291 51.25 0 360724..361521 + 265 123440694 - YE0305 - putative transposase for insertion element IS1669 292 44.79 0 361779..362948 + 389 123440695 - YE0306 - putative hydrolase 293 47.16 0 362987..364642 - 551 123440696 actP YE0307 - acetate permease 294 45.83 0 364639..364950 - 103 123440697 - YE0308 - hypothetical protein 295 48.55 0 365004..366962 - 652 123440698 acs YE0309 - acetyl-CoA synthetase 296 42.92 -1 367882..369195 + 437 123440699 gltP YE0310 - glutamate/aspartate:proton symporter 297 43.13 0 369338..369970 - 210 123440700 - YE0311 - putative two-component response regulator 298 38.81 -1 370458..371078 + 206 123440701 - YE0312 - AraC family transcriptional regulator 299 50.45 0 372183..372404 + 73 123440702 - YE0314 - hypothetical protein 300 51.63 0 372693..373490 - 265 123440703 - YE0315 - hypothetical protein 301 51.38 0 373868..374410 + 180 123440704 - YE0316 - putative DNA-binding protein 302 52.28 0 374403..375368 + 321 123440705 - YE0317 - putative two-component system sensor protein 303 51.03 0 375471..378245 + 924 123440706 - YE0318 - putative exported iron receptor protein 304 51.03 0 378373..380079 + 568 123440707 - YE0319 - putative membrane transport protein ATP-binding component 305 51.92 0 380064..382850 + 928 123440708 - YE0320 - exported Zinc protease 306 43.25 0 382982..383233 + 83 123440709 - YE0321 - antitoxin YefM 307 46.90 0 383508..386036 - 842 123440710 - YE0322 - putative inner-membrane transport protein 308 48.66 0 386263..388395 + 710 123440711 foxA YE0323 - ferrioxamine receptor precursor 309 50.17 0 388865..390373 + 502 123440712 - YE0324 - putative ATP/GTP-binding protein 310 54.43 +1 390519..391319 - 266 123440713 hemV YE0327 - hemin importer ATP-binding subunit 311 55.52 +1 391312..392316 - 334 123440714 hemU YE0328 - hemin transport system permease protein HmuU 312 52.98 +1 392313..393152 - 279 123440715 hemT YE0329 - hemin-binding periplasmic protein 313 48.65 0 393149..394186 - 345 123440716 hemS YE0330 - hemin transport protein 314 51.94 0 394303..396366 - 687 123440717 hemR YE0331 - hemin receptor precursor 315 45.93 0 396539..396784 - 81 123440718 hemP YE0332 - hemin uptake protein 316 53.00 +1 396816..397466 - 216 123440719 - YE0333 - hypothetical protein 317 49.27 0 397463..398008 - 181 123440720 - YE0334 - hypothetical protein 318 50.08 0 398005..399318 - 437 123440721 hemN YE0335 - coproporphyrinogen III oxidase 319 42.09 -1 399955..400947 + 330 123440722 tdcB YE0336 - threonine dehydratase 320 42.59 -1 400972..402300 + 442 123440723 tdcC YE0337 - threonine/serine transporter TdcC 321 48.61 0 402319..403575 + 418 123440724 tdcD YE0338 - propionate/acetate kinase 322 48.89 0 403626..405920 + 764 123440725 tdcE YE0339 - keto-acid formate acetyltransferase 323 44.87 0 406326..406637 - 103 123440726 - YE0340 - hypothetical protein 324 51.94 0 406648..407421 - 257 123440727 - YE0341 - putative dehydrogenase/reductase 325 51.78 0 407491..408471 - 326 123440728 - YE0342 - putative aldo/keto reductase 326 50.11 0 408604..409497 + 297 123440729 - YE0343 - LysR family transcriptional regulator 327 48.09 0 411687..412262 - 191 123440730 - YE0346 - putative transcriptional regulator 328 52.58 +1 412574..413737 + 387 123440731 glxK YE0347 - putative glycerate kinase 329 52.62 +1 413785..415521 - 578 123440732 dipZ YE0348 - thiol:disulfide interchange protein precursor 330 51.16 0 415497..415799 - 100 123440733 - YE0349 - divalent-cation tolerance protein CutA 331 49.23 0 416005..417306 - 433 123440734 b4138 YE0350 - anaerobic C4-dicarboxylate transporter 332 46.56 0 417426..418862 - 478 123440735 aspA YE0351 - aspartate ammonia-lyase 333 44.51 0 419304..419831 + 175 123440736 - YE0352 - FxsA 334 47.62 0 420084..420377 + 97 123440737 groES YE0353 - co-chaperonin GroES 335 50.33 0 420434..422086 + 550 123440738 groEL YE0354 - chaperonin GroEL 336 48.97 0 422468..422806 + 112 123440739 - YE0355 - putative lipoprotein 337 49.90 0 422874..423911 - 345 123440740 - YE0356 - hypothetical protein 338 48.50 0 423947..424513 + 188 123440741 b4147 YE0357 - elongation factor P 339 40.15 -1 424699..424830 + 43 123440742 ecnB YE0358 - entericidin B precursor 340 50.16 0 425009..425323 + 104 123440743 sugE YE0359 - quaternary ammonium compound-resistance protein SugE 341 45.93 0 425325..425864 - 179 123440744 - YE0360 - outer membrane lipoprotein Blc 342 51.54 0 426013..426369 - 118 123440745 b4151 YE0361 - fumarate reductase subunit D 343 47.58 0 426386..426778 - 130 123440746 b4152 YE0362 - fumarate reductase subunit C 344 49.25 0 426795..427529 - 244 123440747 b4153 YE0363 - fumarate reductase iron-sulfur subunit 345 52.63 +1 427522..429345 - 607 123440748 b4154 YE0364 - fumarate reductase flavoprotein subunit 346 51.12 0 429789..430766 + 325 123440749 b4155 YE0365 - lysyl-tRNA synthetase 47.74 MEAN 4.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.