version 1.0
Yersinia enterocolitica subsp. enterocolitica 8081, complete genome - 1..4615899 3979 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2775 53.44 +1 3223856..3226555 + 899 123443178 kdpD YE2963 - sensor protein KdpD 2776 50.19 0 3226714..3227241 + 175 123443179 kdpE YE2964 - two-component regulatory protein response regulator KdpE 2777 48.48 0 3227334..3227762 + 142 123443180 - YE2965 - hypothetical protein 2778 35.95 -2 3227908..3229359 + 483 123443181 - YE2966 - putative hemolysin 2779 49.91 0 3229442..3231082 - 546 123443182 pgm YE2967 - phosphoglucomutase 2780 48.33 0 3231175..3231714 - 179 123443183 seqA YE2968 - replication initiation regulator SeqA 2781 48.05 0 3231928..3232722 + 264 123443184 - YE2969 - hypothetical protein 2782 47.92 0 3233066..3233353 + 95 123443185 - YE2970 - LexA regulated protein 2783 48.64 0 3233420..3235078 - 552 123443186 - YE2971 - putative methyl-accepting chemotaxis protein 2784 46.21 0 3235301..3235828 + 175 123443187 fldA YE2972 - flavodoxin FldA 2785 43.62 0 3236197..3236643 + 148 123443188 fur YE2973 - ferric uptake regulator 2786 48.21 0 3237040..3239715 - 891 123443189 chb YE2974 - chitobiase precursor 2787 48.01 0 3239808..3240134 - 108 123443190 - YE2975 - putative lipoprotein 2788 48.86 0 3240195..3241598 - 467 123443191 ybfM YE2976 - hypothetical protein 2789 49.10 0 3242234..3243901 - 555 123443192 glnS YE2977 - glutaminyl-tRNA synthetase 2790 49.90 0 3244095..3246128 - 677 123443193 nagE YE2978 - pts system, N-acetylglucosamine-specific IIABC component 2791 46.44 0 3246499..3247299 + 266 123443194 nagB YE2979 - glucosamine-6-phosphate deaminase 2792 47.21 0 3247319..3248464 + 381 123443195 nagA YE2980 - N-acetylglucosamine-6-phosphate deacetylase 2793 48.53 0 3248478..3249701 + 407 123443196 nagC YE2981 - putative N-acetylglucosamine regulatory protein 2794 48.74 0 3249912..3250664 + 250 123443197 nagD YE2982 - UMP phosphatase 2795 48.17 0 3251009..3252673 + 554 123443198 asnB YE2983 - asparagine synthetase B 2796 51.69 0 3253760..3254941 - 393 123443199 ubiF YE2984 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2797 48.14 0 3255184..3256608 + 474 123443200 miaB YE2985 - putative tRNA-thiotransferase 2798 50.37 0 3256887..3257978 + 363 123443201 - YE2986 - hypothetical protein 2799 46.20 0 3257975..3258448 + 157 123443202 - YE2987 - putative metalloprotease 2800 47.21 0 3258563..3259441 + 292 123443203 ybeX YE2988 - hypothetical protein 2801 50.76 0 3259449..3261026 + 525 123443204 lnt YE2989 - apolipoprotein N-acyltransferase 2802 47.35 0 3261035..3261619 + 194 123443205 - YE2990 - hypothetical protein 2803 46.99 0 3262206..3263120 + 304 123443206 glnH YE2991 - glutamate and aspartate transporter subunit 2804 47.37 0 3263298..3264038 + 246 123443207 gltJ YE2992 - putative glutamate/aspartate transport system permease 2805 50.37 0 3264038..3264712 + 224 123443208 gltK YE2993 - putative glutamate/aspartate transport system permease 2806 46.50 0 3264709..3265437 + 242 123443209 gltL YE2994 - putative glutamate/aspartate transport ATP-binding protein 2807 45.96 0 3265493..3265975 - 160 123443210 - YE2995 - hypothetical protein 2808 50.75 0 3266354..3268936 + 860 123443211 leuS YE2996 - leucyl-tRNA synthetase 2809 50.64 0 3268951..3269574 + 207 123443212 rlpB YE2997 - LPS-assembly lipoprotein RplB 2810 47.73 0 3269571..3270605 + 344 123443213 holA YE2998 - DNA polymerase III subunit delta 2811 48.42 0 3270595..3271257 + 220 123443214 nadD YE2999 - nicotinic acid mononucleotide adenylyltransferase 2812 47.48 0 3271557..3271874 + 105 123443215 - YE3000 - hypothetical protein 2813 53.72 +1 3271878..3272348 + 156 123443216 - YE3001 - SPOUT methyltransferase superfamily protein 2814 50.37 0 3272423..3274318 + 631 123443217 mrdA YE3002 - penicillin-binding protein 2 2815 47.26 0 3274355..3275467 + 370 123443218 mrdB YE3003 - cell wall shape-determining protein 2816 54.37 +1 3275477..3276574 + 365 123443219 rlpA YE3004 - rare lipoprotein A 2817 48.27 0 3276788..3277999 + 403 123443220 dacA YE3005 - D-alanyl-D-alanine carboxypeptidase fraction A 2818 45.83 0 3278148..3278411 + 87 123443221 - YE3006 - hypothetical protein 2819 50.14 0 3278566..3279279 + 237 123443222 lipB YE3007 - lipoyltransferase 2820 48.55 0 3279468..3280433 + 321 123443223 lip YE3008 - lipoyl synthase 2821 48.15 0 3280576..3280791 - 71 123443224 tatE YE3009 - twin argininte translocase protein A 2822 44.16 0 3280995..3282047 + 350 123443225 adrA YE3010 - diguanylate cyclase/phosphodiesterase domain-containing protein 2823 43.23 0 3282095..3282478 + 127 123443226 crcB YE3011 - hypothetical protein 2824 43.81 0 3282778..3282987 - 69 123443227 cspE YE3012 - cold shock protein CspE 2825 37.37 -2 3283362..3283733 + 123 123443228 - YE3013 - hypothetical protein 2826 36.76 -2 3283919..3284530 - 203 123443229 - YE3014 - LuxR family regulatory protein 2827 36.13 -2 3284883..3285848 + 321 123443230 - YE3015 - hypothetical protein 2828 42.95 -1 3285999..3286643 - 214 123443231 - YE3016 - serine/threonine protein phosphatase 2829 38.46 -1 3286894..3287088 - 64 123443232 - YE3017 - hypothetical protein 2830 39.24 -1 3287435..3287722 + 95 123443233 - YE3018 - hypothetical protein 2831 44.50 0 3287740..3289512 - 590 123443234 - YE3019 - putative ABC transport protein 2832 44.24 0 3290029..3291504 - 491 123443235 - YE3020 - putative lyase 2833 41.92 -1 3291534..3293129 - 531 123443236 - YE3021 - putative phenylalanine and histidine ammonia-lyase 2834 47.06 0 3293587..3294708 - 373 123443237 - YE3022 - hypothetical protein 2835 49.01 0 3295097..3296053 - 318 123443238 - YE3023 - hypothetical protein 2836 51.59 0 3296382..3297071 + 229 123443239 copR YE3024 - transcriptional activator 2837 51.96 0 3297087..3298562 + 491 123443240 - YE3025 - putative two-component system sensor protein 2838 57.14 +1 3298631..3298987 + 118 123443241 - YE3026 - hypothetical protein 2839 50.85 0 3299086..3299850 + 254 123443242 - YE3027 - exported protein 2840 50.70 0 3301140..3301991 + 283 123443243 - YE3031 - putative aldo/keto reductase 2841 42.51 -1 3302151..3302477 - 108 123443244 - YE3032 - hypothetical protein 2842 49.78 0 3302712..3303623 + 303 123443245 - YE3033 - LysR family transcriptional regulator 2843 45.43 0 3303626..3304741 - 371 123443246 - YE3034 - NADH:flavin oxidoreductase / NADH oxidase family protein 2844 42.48 -1 3305377..3305715 + 112 123443247 - YE3035 - hypothetical protein 2845 41.36 -1 3305700..3306347 + 215 123443248 - YE3036 - hypothetical protein 2846 39.27 -1 3307405..3308364 + 319 123443249 - YE3039 - hypothetical protein 2847 53.00 +1 3308773..3309072 + 99 123443250 - YE3040 - transposase for insertion element IS3 2848 52.16 0 3309069..3309461 + 130 123443251 - YE3041 - transposase for insertion element IS3 2849 46.14 0 3309489..3310058 - 189 123443252 - YE3042 - hypothetical protein 2850 46.25 0 3310600..3310932 + 110 123443253 tnpA YE3043 - IS1329 transposase A 2851 49.20 0 3311022..3311771 + 249 123443254 tnpB YE3044 - transposase B 2852 50.00 0 3312100..3312981 + 293 123443255 ads YE3045 - bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2853 44.13 0 3312981..3313193 + 70 123443256 - YE3046 - hypothetical protein 2854 48.56 0 3313398..3314783 - 461 123443257 cysS YE3048 - cysteinyl-tRNA synthetase 2855 46.26 0 3314996..3315490 + 164 123443258 ppiB YE3049 - peptidyl-prolyl cis-trans isomerase B (rotamase B) 2856 45.64 0 3315501..3316223 + 240 123443259 - YE3050 - UDP-2,3-diacylglucosamine hydrolase 2857 54.86 +1 3316400..3316924 + 174 123443260 purE YE3051 - phosphoribosylaminoimidazole carboxylase catalytic subunit PurE 2858 51.83 0 3316921..3317985 + 354 123443261 purK YE3052 - phosphoribosylaminoimidazole carboxylase ATPase subunit 2859 53.48 +1 3318139..3320565 - 808 123443262 ybbP YE3053 - putative permease 2860 52.40 0 3320562..3321248 - 228 123443263 ybbA YE3054 - putative ABC transporter ATP-binding protein YbbA 2861 50.08 0 3321216..3321854 + 212 123443264 apeA YE3055 - multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 2862 51.09 0 3321900..3322676 + 258 123443265 ybbO YE3056 - short chain dehydrogenase 2863 51.26 0 3322748..3323617 + 289 123443266 ybbN YE3057 - putative thioredoxin 2864 47.10 0 3323815..3324729 + 304 123443267 - YE3058 - hypothetical protein 2865 51.11 0 3324732..3325181 + 149 123443268 ybbJ YE3059 - hypothetical protein 2866 46.90 0 3325227..3325646 - 139 123443269 cueR YE3060 - putative regulatory protein 2867 52.12 0 3325843..3328599 + 918 123443270 ybaR YE3061 - copper exporting ATPase 2868 50.25 0 3328681..3329490 + 269 123443271 - YE3062 - hypothetical protein 2869 48.54 0 3329766..3330245 + 159 123443272 - YE3063 - hypothetical protein 2870 47.35 0 3330944..3331963 + 339 123443273 - YE3064 - putative transposase for IS1667 2871 47.67 0 3332365..3334017 - 550 123443274 ushA YE3066 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 2872 46.97 0 3334410..3335516 + 368 123443275 fsr YE3067 - putative membrane efflux protein 2873 48.94 0 3335753..3337444 + 563 123443276 rosB YE3068 - putative cation:proton antiport protein 2874 44.37 0 3337519..3338823 - 434 123443277 gsk YE3069 - inosine-guanosine kinase 47.74 MEAN 4.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0