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Yersinia enterocolitica subsp. enterocolitica 8081, complete genome - 1..4615899 3979 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1538 50.20 0 1840505..1841239 + 244 123441941 fabG YE1635 - 3-ketoacyl-(acyl-carrier-protein) reductase 1539 42.19 -1 1841393..1841629 + 78 123441942 acpP YE1636 - acyl carrier protein 1540 50.36 0 1841724..1842962 + 412 123441943 fabF YE1637 - 3-oxoacyl-(acyl carrier protein) synthase II 1541 50.67 0 1843200..1844024 + 274 123441944 pabC YE1638 - 4-amino-4-deoxychorismate lyase 1542 47.86 0 1844086..1845111 + 341 123441945 yceG YE1639 - hypothetical protein 1543 51.96 0 1845101..1845739 + 212 123441946 tdk YE1640 - thymidylate kinase 1544 53.27 +1 1845739..1846746 + 335 123441947 holB YE1641 - DNA polymerase III subunit delta' 1545 48.89 0 1846761..1847570 + 269 123441948 - YE1642 - putative metallodependent hydrolase 1546 50.42 0 1847878..1849311 + 477 123441949 glcA YE1643 - glucose-specific PTS system IIBC components 1547 47.83 0 1849385..1849729 - 114 123441950 ogr YE1643A - phage late control protein 1548 54.14 +1 1849792..1850901 - 369 123441951 gpD YE1644 - regulator of late gene expression 1549 53.27 +1 1851043..1852221 + 392 123441952 fI YE1645 - major tail sheath protein 1550 54.65 +1 1852233..1852748 + 171 123441953 fII YE1646 - major tail tube protein 1551 50.22 0 1852764..1853215 + 150 123441955 gpE' YE1647A - putative phage tail protein E' 1552 48.46 0 1852764..1853087 + 107 123441954 gpE YE1647 - putative phage tail protein 1553 52.31 0 1856433..1856843 + 136 123441956 gpU YE1650 - putative phage tail protein 1554 36.11 -2 1856945..1857232 + 95 123441957 - YE1651 - hypothetical protein 1555 40.98 -1 1857369..1857551 - 60 123441958 - YE1652 - hypothetical protein 1556 49.40 0 1857643..1857891 - 82 123441959 - YE1653 - hypothetical protein 1557 49.05 0 1857891..1858259 + 122 123441960 - YE1654 - hypothetical protein 1558 50.00 0 1858406..1859353 - 315 123441961 - YE1655 - putative transposase 1559 48.60 0 1860141..1860461 - 106 123441962 - YE1657 - hypothetical protein 1560 42.96 -1 1860804..1861208 - 134 123441963 - YE1658 - hypothetical protein 1561 44.02 0 1861208..1861441 - 77 123441964 - YE1659 - hypothetical protein 1562 49.76 0 1861923..1862537 - 204 123441965 - YE1661 - putative phage tail fiber assembly protein 1563 52.64 +1 1862537..1863919 - 460 123441966 gpH YE1662 - variable tail fibre protein 1564 56.17 +1 1863916..1864458 - 180 123441967 gpI YE1663 - phage tail protein 1565 59.30 +2 1864451..1865359 - 302 123441968 gpJ YE1664 - baseplate assembly protein 1566 52.71 +1 1865356..1865706 - 116 123441969 gpW YE1665 - baseplate assembly protein 1567 56.48 +1 1865703..1866350 - 215 123441970 gpV YE1666 - baseplate assembly protein 1568 45.92 0 1866458..1867045 - 195 123441971 - YE1667 - putative Fic-related phage protein 1569 53.24 +1 1867324..1867941 - 205 123441972 gpS YE1669 - tail completion protein 1570 53.50 +1 1867984..1868454 - 156 123441973 gpR YE1670 - tail completion protein r 1571 55.16 +1 1868553..1868978 - 141 123441974 lysB YE1671 - phage lysin 1572 55.05 +1 1868983..1869378 - 131 123441975 - YE1672 - putative phagelysin 1573 50.90 0 1869365..1869751 - 128 123441976 - YE1672A - putative phage holin 1574 56.86 +1 1869789..1869992 - 67 123441977 gpX YE1673 - phage tail protein 1575 58.80 +2 1869993..1870475 - 160 123441978 gpL YE1674 - phage head completion/stabilization protein 1576 54.57 +1 1870596..1871306 - 236 123441979 gpM YE1675 - phage terminase/endonuclease subunit 1577 52.44 0 1871335..1872381 - 348 123441980 gpN YE1676 - major phage capsid protein precursor 1578 52.40 0 1872414..1873268 - 284 123441981 gpO YE1677 - putative phage capsid scaffolding protein 1579 53.87 +1 1873426..1875144 + 572 123441982 gpP YE1678 - terminase, ATPase subunit 1580 55.33 +1 1875147..1876187 + 346 123441983 gpQ YE1679 - putative portal vertex protein 1581 35.76 -2 1876566..1877924 - 452 123441984 - YE1681 - prophage encoded DNA modification methylase 1582 32.66 -2 1878009..1878452 - 147 123441985 - YE1682 - hypothetical protein 1583 29.27 -2 1878468..1879427 - 319 123441986 - YE1683 - putative prophage encoded two-component system response regulator 1584 30.90 -2 1879424..1881802 - 792 123441987 - YE1684 - putative prophage encoded two-component system histidine kinase 1585 50.81 0 1882132..1884420 - 762 123441988 gpA YE1686 - phage replication protein 1586 48.89 0 1884420..1884644 - 74 123441989 - YE1687 - hypothetical protein 1587 41.67 -1 1884644..1884871 - 75 123441990 - YE1688 - hypothetical protein 1588 40.96 -1 1884949..1885197 - 82 123441991 - YE1689 - hypothetical protein 1589 46.81 0 1885233..1885514 - 93 123441992 - YE1689A - hypothetical protein 1590 44.19 0 1885529..1885795 - 88 123441993 - YE1690 - phage DNA-binding protein 1591 47.67 0 1885885..1886184 + 99 123441994 cI YE1691 - phage repressor protein 1592 44.11 0 1886248..1887231 + 327 123441995 int YE1692 - P2-like phage integrase 1593 33.95 -2 1887316..1888287 + 323 123441996 - YE1693 - hypothetical protein 1594 46.84 0 1888605..1889063 + 152 123441997 tnp YE1694 - transposase for IS1541 1595 40.67 -1 1889227..1890057 - 276 123441998 - YE1695 - hypothetical protein 1596 48.54 0 1890125..1891669 - 514 123441999 - YE1696 - putative ABC transport protein, ATP-binding component 1597 45.71 0 1891740..1892450 - 236 123442000 - YE1697 - hypothetical protein 1598 40.59 -1 1892594..1893847 - 417 123442001 - YE1698 - hypothetical protein 1599 49.80 0 1894430..1896220 - 596 123442002 - YE1699 - putative ABC-transport protein, solute binding component 1600 48.05 0 1896368..1897189 + 273 123442003 - YE1700 - shikimate 5-dehydrogenase 1601 48.02 0 1897265..1897618 + 117 123442004 - YE1701 - purine nucleoside phosphoramidase 1602 44.87 0 1897655..1898044 + 129 123442005 ycfL YE1702 - putative lipoprotein 1603 50.10 0 1898186..1898680 + 164 123442006 - YE1703 - putative lipoprotein 1604 53.07 +1 1898898..1899581 + 227 123442007 - YE1704 - hypothetical protein 1605 52.44 0 1899737..1900762 + 341 123442008 ycfO YE1705 - beta-hexosaminidase 1606 46.78 0 1900765..1901307 + 180 123442009 - YE1706 - hypothetical protein 1607 49.04 0 1901695..1902999 + 434 123442010 ndh YE1707 - NADH dehydrogenase 1608 49.07 0 1903698..1904237 + 179 123442011 ycfJ YE1708 - hypothetical protein 1609 51.38 0 1904376..1907822 - 1148 123442012 mfd YE1709 - transcription-repair coupling factor 1610 50.46 0 1908143..1909345 + 400 123442013 lolC YE1710 - outer membrane-specific lipoprotein transporter subunit LolC 1611 50.07 0 1909338..1910042 + 234 123442014 lolD YE1711 - lipoprotein transporter ATP-binding subunit 1612 50.24 0 1910054..1911301 + 415 123442015 lolE YE1712 - outer membrane-specific lipoprotein transporter subunit LolE 1613 47.92 0 1911367..1912278 + 303 123442016 - YE1713 - N-acetyl-D-glucosamine kinase 1614 50.42 0 1912439..1913275 + 278 123442017 cobB YE1714 - NAD-dependent deacetylase 1615 45.79 0 1913580..1914815 + 411 123442018 pepT YE1715 - peptidase T 1616 49.91 0 1915015..1916136 - 373 123442019 - YE1716 - hypothetical protein 1617 46.87 0 1916221..1917675 - 484 123442020 phoQ YE1717 - sensor protein PhoQ 1618 44.79 0 1917681..1918352 - 223 123442021 phoP YE1718 - DNA-binding transcriptional regulator PhoP 1619 45.83 0 1918424..1919047 - 207 123442022 - YE1719 - putative lipoprotein 1620 47.05 0 1919235..1920605 - 456 123442023 purB YE1720 - adenylosuccinate lyase 1621 49.44 0 1920631..1921257 - 208 123442024 - YE1721 - hypothetical protein 1622 50.27 0 1921382..1922503 - 373 123442025 trmU YE1722 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1623 46.53 0 1922690..1923136 - 148 123442026 - YE1723 - hypothetical protein 1624 46.57 0 1923129..1923755 - 208 123442027 ymfC YE1724 - putative pseudouridine synthase 1625 46.65 0 1923886..1925139 + 417 123442028 icd YE1725 - isocitrate dehydrogenase 1626 42.62 -1 1925672..1926532 + 286 123442029 - YE1726 - hypothetical protein 1627 44.72 0 1926684..1927904 + 406 123442030 - YE1727 - putative inner membrane protein 1628 41.76 -1 1929451..1929711 - 86 123442031 - YE1730 - hypothetical protein 1629 50.13 0 1929885..1931444 - 519 123442032 aer YE1731 - putative methyl-accepting chemotaxis protein 1630 46.41 0 1932015..1933283 - 422 123442033 umuC YE1732 - putative UV protection and mutation protein 1631 45.17 0 1933283..1933696 - 137 123442034 umuD YE1733 - putative UV protection and mutation protein 1632 50.79 0 1934339..1934653 + 104 123442035 - YE1735 - IS1669 hypothetical protein 1633 51.25 0 1934671..1935468 + 265 123442036 - YE1736 - putative transposase for insertion element IS1669 1634 51.05 0 1936070..1936927 - 285 123442037 - YE1738 - hypothetical protein 1635 47.37 0 1937261..1937602 + 113 123442038 - YE1739 - hypothetical protein 1636 43.16 0 1937666..1937950 - 94 123442039 - YE1740 - hypothetical protein 1637 43.83 0 1938628..1939542 - 304 123442040 - YE1742 - putative inner membrane protein 47.74 MEAN 4.70 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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