IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
833	 64.49	0	962284..962421	+	45	58580554	-	XOO0931	-	hypothetical protein
834	 62.77	0	962418..963110	-	230	58580555	-	XOO0932	-	transposase
835	 63.10	0	962857..963417	-	186	121632044	-	XOO4734	-	transposase
836	 65.88	0	964377..965267	-	296	58580558	-	XOO0935	-	LysR family transcriptional regulator
837	 64.73	0	965382..966830	+	482	58580559	leuC	XOO0936	-	isopropylmalate isomerase large subunit
838	 60.80	0	966898..967545	+	215	161899011	leuD	XOO0937	-	isopropylmalate isomerase small subunit
839	 63.78	0	968362..969435	+	357	58580563	leuB	XOO0940	-	3-isopropylmalate dehydrogenase
840	 63.53	0	969766..971328	-	520	58580564	leuA	XOO0941	-	2-isopropylmalate synthase
841	 67.83	+1	972526..972783	-	85	58580567	ilvM	XOO0944	-	acetolactate synthase isozyme II small subunit
842	 65.80	0	972767..974488	-	573	58580568	ilvG	XOO0945	-	acetolactate synthase 2 catalytic subunit
843	 61.88	0	974532..975533	-	333	122879058	ilvC	XOO0946	-	ketol-acid reductoisomerase
844	 61.61	0	976967..978688	+	573	58580570	thiC	XOO0947	-	thiamine biosynthesis protein ThiC
845	 64.67	0	979063..981465	+	800	58580571	-	XOO0948	-	hypothetical protein
846	 61.66	0	981531..982469	+	312	58580572	-	XOO0949	-	transcriptional regulator
847	 61.14	0	982515..985484	+	989	58580573	btuB	XOO0950	-	TonB-dependent receptor
848	 66.06	0	986099..987247	-	382	58580574	-	XOO0951	-	response regulator
849	 61.64	0	987361..987897	-	178	58580575	ppa	XOO0952	-	inorganic pyrophosphatase
850	 66.17	0	987974..988576	+	200	58580576	-	XOO0953	-	hypothetical protein
851	 62.15	0	990185..990760	-	191	58580578	-	XOO0955	-	H+ translocating pyrophosphate synthase
852	 63.13	0	990772..991788	+	338	58580579	-	XOO0956	-	transposase
853	 63.13	0	991785..992123	-	112	58580580	-	XOO0957	-	H+ translocating pyrophosphate synthase
854	 63.43	0	992210..992734	+	174	58580581	-	XOO0958	-	hypothetical protein
855	 64.44	0	992878..993012	-	44	58580582	-	XOO0959	-	transposase
856	 63.31	0	993061..993894	-	277	58580583	-	XOO0960	-	transposase
857	 58.11	-1	993926..994264	-	112	58580584	-	XOO0961	-	putative ISXo8 transposase
858	 64.92	0	994415..995671	-	418	58580585	pfkA	XOO0962	-	6-phosphofructokinase
859	 63.83	0	995831..996394	+	187	58580586	adk	XOO0963	-	adenylate kinase
860	 66.00	0	996761..998119	+	452	122879059	mpl	XOO0964	-	UDP-N-acetylmuramate-L-alanine ligase
861	 65.17	0	998116..998715	+	199	58580588	-	XOO0965	-	hypothetical protein
862	 61.36	0	998862..999746	+	294	58580589	-	XOO0966	-	hypothetical protein
863	 61.69	0	1000502..1001164	-	220	58580591	-	XOO0968	-	putative transposase
864	 58.33	-1	1001130..1001501	-	123	58580592	-	XOO0969	-	putative transposase
865	 62.11	0	1001728..1002342	+	204	58580593	gst	XOO0970	-	glutathione S-transferase
866	 63.63	0	1002425..1003411	-	328	58580594	mdh	XOO0971	-	malate dehydrogenase
867	 65.66	0	1003527..1004021	-	164	58580595	ppiB	XOO0972	-	peptidyl-prolyl cis-trans isomerase
868	 62.40	0	1004266..1006095	+	609	58580596	typA	XOO0973	-	GTP-binding elongation factor protein
869	 67.14	0	1006165..1006584	+	139	58580597	-	XOO0974	-	hypothetical protein
870	 66.89	0	1006807..1007244	+	145	58580598	gatAX	XOO0975	-	Glu-tRNAGln amidotransferase A subunit
871	 63.92	0	1007507..1008634	-	375	122879060	-	XOO0976	-	membrane protein
872	 63.27	0	1008735..1010117	-	460	122879061	dhs1	XOO0977	-	family II 2-keto-3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
873	 62.19	0	1010365..1012488	+	707	58580601	cirA	XOO0978	-	colicin I receptor
874	 62.86	0	1013018..1013542	-	174	58580602	dsbB	XOO0979	-	disulfide bond formation protein B
875	 63.60	0	1013706..1014194	+	162	58580603	-	XOO0980	-	IS1478 transposase
876	 63.93	0	1014359..1015345	+	328	58580604	-	XOO0981	-	IS1404 transposase
877	 62.96	0	1015863..1017104	+	413	58580607	-	XOO0984	-	transposase
878	 61.59	0	1017101..1017691	+	196	58580608	-	XOO0985	-	IS1478 transposase
879	 59.20	-1	1017718..1018869	-	383	58580609	-	XOO0986	-	hypothetical protein
880	 60.81	0	1019093..1019587	-	164	58580610	-	XOO0987	-	IS1404 transposase
881	 61.84	0	1019668..1019874	-	68	58580611	-	XOO0988	-	IS1478 transposase
882	 62.73	0	1020045..1021010	-	321	58580612	-	XOO0989	-	transposase
883	 60.22	-1	1021090..1021539	+	149	58580613	tnpA	XOO0990	-	transposase
884	 60.63	0	1022028..1022375	-	115	121632045	-	XOO4735	-	IS1478 transposase
885	 63.43	0	1022406..1023641	-	411	58580615	-	XOO0992	-	transposase
886	 59.47	-1	1026406..1026669	-	87	121632046	-	XOO4736	-	IS1404 transposase
887	 63.77	0	1026709..1026846	-	45	121632047	-	XOO4737	-	hypothetical protein
888	 64.57	0	1027764..1028384	-	206	58580625	-	XOO1002	-	pseudouridylate synthase
889	 63.10	0	1028697..1029650	+	317	58580626	-	XOO1003	-	transposase
890	 64.26	0	1029952..1031529	+	525	122879062	-	XOO1004	-	hypothetical protein
891	 54.81	-2	1031941..1032387	-	148	58580629	-	XOO1006	-	transposase
892	 62.46	0	1032418..1033416	+	332	58580630	-	XOO1007	-	ISxac1 transposase
893	 63.68	0	1033417..1033650	+	77	58580631	-	XOO1008	-	ISxac1 transposase
894	 62.56	0	1033655..1034896	+	413	58580632	-	XOO1009	-	putative ISXo8 transposase
895	 61.44	0	1035040..1035192	-	50	58580634	-	XOO1011	-	putative transposase
896	 59.92	-1	1036273..1036776	-	167	58580637	-	XOO1014	-	hypothetical protein
897	 61.32	0	1037283..1037525	-	80	58580638	glpQ	XOO1015	-	glycerophosphodiester phosphodiesterase
898	 56.97	-1	1037519..1037848	-	109	58580639	-	XOO1016	-	transposase
899	 54.59	-2	1037864..1038310	-	148	58580640	-	XOO1017	-	transposase
900	 62.60	0	1038316..1039053	-	245	58580641	glpQ	XOO1018	-	glycerophosphodiester phosphodiesterase
901	 61.11	0	1040016..1040897	+	293	58580643	-	XOO1020	-	putative ISXo8 transposase
902	 57.98	-1	1040867..1041223	+	118	58580644	-	XOO1021	-	putative transposase
903	 59.03	-1	1041189..1041620	+	143	58580645	-	XOO1022	-	putative transposase
904	 63.03	0	1041621..1042637	-	338	58580646	-	XOO1023	-	transposase
905	 65.38	0	1042850..1043857	+	335	161899010	icd	XOO1024	-	isocitrate dehydrogenase
906	 62.07	0	1044001..1044762	-	253	58580648	-	XOO1025	-	hypothetical protein
907	 58.33	-1	1045635..1045898	+	87	121632048	-	XOO4738	-	IS1404 transposase
908	 64.96	0	1046193..1046426	+	77	58580651	-	XOO1028	-	IS1404 transposase
909	 59.13	-1	1046396..1046740	+	114	58580652	-	XOO1029	-	IS1404 transposase
910	 60.48	0	1046884..1047093	+	69	58580653	-	XOO1030	-	DNA replication protein
911	 60.52	0	1047164..1047472	+	102	58580654	-	XOO1031	-	IS1478 transposase
912	 64.84	0	1047894..1049375	+	493	58580655	tig	XOO1032	-	trigger factor
913	 60.93	0	1049468..1050094	+	208	58580656	clpP	XOO1033	-	ATP-dependent Clp protease proteolytic subunit
914	 59.91	-1	1050219..1051505	+	428	58580657	clpX	XOO1034	-	ATP-dependent protease ATP-binding subunit
915	 62.44	0	1051568..1054120	+	850	58580658	lon	XOO1035	-	ATP-dependent serine proteinase La
916	 57.53	-1	1054169..1054606	+	145	58580659	hupB	XOO1036	-	histone-like protein
917	 62.92	0	1055381..1057408	+	675