IslandPathversion 1.0

IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 63.81 STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
790	 63.28	0	912675..913028	+	117	58580510	pilZ	XOO0887	-	type IV fimbriae assembly protein
791	 59.49	-1	914984..915373	+	129	58580513	-	XOO0890	-	hypothetical protein
792	 65.37	0	915609..917384	-	591	58580514	prpR	XOO0891	-	propionate catabolism regulatory protein
793	 66.00	0	917353..918249	+	298	161899012	prpB	XOO0892	-	2-methylisocitrate lyase
794	 60.85	0	918310..919479	+	389	58580516	prpC	XOO0893	-	methylcitrate synthase
795	 63.31	0	919646..922237	+	863	122879053	acnA	XOO0894	-	aconitate hydratase
796	 67.39	+1	922560..922697	+	45	58580518	-	XOO0895	-	hypothetical protein
797	 65.83	0	922970..924169	+	399	58580519	-	XOO0896	-	hypothetical protein
798	 63.51	0	924669..926885	+	738	122879054	fyuA	XOO0897	-	TonB-dependent receptor
799	 66.86	0	926925..927962	+	345	58580521	-	XOO0898	-	inosine-uridine preferring nucleoside hydrolase
800	 59.56	-1	928072..928254	-	60	58580522	-	XOO0899	-	hypothetical protein
801	 64.32	0	928287..929009	+	240	58580523	-	XOO0900	-	hypothetical protein
802	 60.41	0	929234..932221	+	995	122879055	fecA	XOO0901	-	TonB-dependent receptor
803	 63.14	0	932522..933343	+	273	122879056	glpQ	XOO0902	-	glycerophosphodiester phosphodiesterase
804	 68.07	+1	933669..934382	+	237	58580526	-	XOO0903	-	hypothetical protein
805	 63.36	0	934342..935400	+	352	58580527	-	XOO0904	-	putative ISXo8 transposase
806	 58.77	-1	935541..935768	+	75	58580528	-	XOO0905	-	putative ISXo8 transposase
807	 59.39	-1	936060..937076	+	338	58580529	tnpA	XOO0906	-	transposase
808	 59.89	-1	937210..937770	-	186	58580530	-	XOO0907	-	bacterioferritin
809	 62.73	0	937813..938295	-	160	58580531	-	XOO0908	-	peroxiredoxin
810	 62.85	0	938359..938934	+	191	58580532	hspA	XOO0909	-	low molecular weight heat shock protein
811	 67.44	+1	939345..940244	+	299	58580533	cbpA	XOO0910	-	curved DNA binding protein
812	 58.40	-1	940484..940870	+	128	58580534	pilH	XOO0911	-	PilH family regulatory protein
813	 66.16	0	941449..942627	+	392	58580535	hflK	XOO0912	-	integral membrane protease subunit
814	 63.08	0	942627..943490	+	287	58580536	hflC	XOO0913	-	integral membrane proteinase subunit
815	 64.52	0	943784..943969	+	61	58580537	-	XOO0914	-	hypothetical protein
816	 65.51	0	944124..945599	+	491	58580538	purA	XOO0915	-	adenylosuccinate synthetase
817	 63.52	0	945925..948597	+	890	58580539	pepN	XOO0916	-	aminopeptidase N
818	 62.96	0	948791..949573	-	260	58580540	-	XOO0917	-	IS1595 transposase
819	 63.26	0	949684..950682	-	332	58580541	-	XOO0918	-	IS1478 transposase
820	 63.82	0	950689..951144	-	151	58580542	-	XOO0919	-	IS1478 transposase
821	 65.72	0	951304..951939	+	211	58580543	-	XOO0920	-	hypothetical protein
822	 63.93	0	951939..952376	+	145	58580544	msi147	XOO0921	-	hypothetical protein
823	 67.17	0	953225..953422	+	65	122879057	-	XOO0922	-	hypothetical protein
824	 69.85	+1	953447..954544	+	365	121632043	-	XOO4733	-	glycosyltransferase
825	 70.29	+1	953663..954544	+	293	58580546	-	XOO0923	-	glycosyltransferase
826	 66.67	0	954525..955859	+	444	58580547	-	XOO0924	-	membrane protein
827	 64.39	0	956093..957013	-	306	58580548	htrB	XOO0925	-	lipid A biosynthesis lauroyl acyltransferase
828	 65.00	0	957090..958406	+	438	58580549	kdtA	XOO0926	-	3-deoxy-D-manno-octulosonic-acid transferase
829	 62.46	0	958679..960058	-	459	58580550	tolC	XOO0927	-	hypothetical protein
830	 65.18	0	960079..960750	-	223	58580551	pcm	XOO0928	-	L-isoaspartate protein carboxylmethyltransferase
831	 64.53	0	960864..961517	-	217	58580552	-	XOO0929	-	transcriptional regulator
832	 67.45	+1	961737..962249	+	170	58580553	-	XOO0930	-	hypothetical protein
833	 64.49	0	962284..962421	+	45	58580554	-	XOO0931	-	hypothetical protein
834	 62.77	0	962418..963110	-	230	58580555	-	XOO0932	-	transposase
835	 63.10	0	962857..963417	-	186	121632044	-	XOO4734	-	transposase
836	 65.88	0	964377..965267	-	296	58580558	-	XOO0935	-	LysR family transcriptional regulator
837	 64.73	0	965382..966830	+	482	58580559	leuC	XOO0936	-	isopropylmalate isomerase large subunit
838	 60.80	0	966898..967545	+	215	161899011	leuD	XOO0937	-	isopropylmalate isomerase small subunit
839	 63.78	0	968362..969435	+	357	58580563	leuB	XOO0940	-	3-isopropylmalate dehydrogenase
840	 63.53	0	969766..971328	-	520	58580564	leuA	XOO0941	-	2-isopropylmalate synthase
841	 67.83	+1	972526..972783	-	85	58580567	ilvM	XOO0944	-	acetolactate synthase isozyme II small subunit
842	 65.80	0	972767..974488	-	573	58580568	ilvG	XOO0945	-	acetolactate synthase 2 catalytic subunit
843	 61.88	0	974532..975533	-	333	122879058	ilvC	XOO0946	-	ketol-acid reductoisomerase
844	 61.61	0	976967..978688	+	573	58580570	thiC	XOO0947	-	thiamine biosynthesis protein ThiC
845	 64.67	0	979063..981465	+	800	58580571	-	XOO0948	-	hypothetical protein
846	 61.66	0	981531..982469	+	312	58580572	-	XOO0949	-	transcriptional regulator
847	 61.14	0	982515..985484	+	989	58580573	btuB	XOO0950	-	TonB-dependent receptor
848	 66.06	0	986099..987247	-	382	58580574	-	XOO0951	-	response regulator
849	 61.64	0	987361..987897	-	178	58580575	ppa	XOO0952	-	inorganic pyrophosphatase
850	 66.17	0	987974..988576	+	200	58580576	-	XOO0953	-	hypothetical protein
851	 62.15	0	990185..990760	-	191	58580578	-	XOO0955	-	H+ translocating pyrophosphate synthase
852	 63.13	0	990772..991788	+	338	58580579	-	XOO0956	-	transposase
853	 63.13	0	991785..992123	-	112	58580580	-	XOO0957	-	H+ translocating pyrophosphate synthase
854	 63.43	0	992210..992734	+	174	58580581	-	XOO0958	-	hypothetical protein
855	 64.44	0	992878..993012	-	44	58580582	-	XOO0959	-	transposase
856	 63.31	0	993061..993894	-	277	58580583	-	XOO0960	-	transposase
857	 58.11	-1	993926..994264	-	112	58580584	-	XOO0961	-	putative ISXo8 transposase
858	 64.92	0	994415..995671	-	418	58580585	pfkA	XOO0962	-	6-phosphofructokinase
859	 63.83	0	995831..996394	+	187	58580586	adk	XOO0963	-	adenylate kinase
860	 66.00	0	996761..998119	+	452	122879059	mpl	XOO0964	-	UDP-N-acetylmuramate-L-alanine ligase
861	 65.17	0	998116..998715	+	199	58580588	-	XOO0965	-	hypothetical protein
862	 61.36	0	998862..999746	+	294	58580589	-	XOO0966	-	hypothetical protein
863	 61.69	0	1000502..1001164	-	220	58580591	-	XOO0968	-	putative transposase
864	 58.33	-1	1001130..1001501	-	123	58580592	-	XOO0969	-	putative transposase
865	 62.11	0	1001728..1002342	+	204	58580593	gst	XOO0970	-	glutathione S-transferase
866	 63.63	0	1002425..1003411	-	328	58580594	mdh	XOO0971	-	malate dehydrogenase
867	 65.66	0	1003527..1004021	-	164	58580595	ppiB	XOO0972	-	peptidyl-prolyl cis-trans isomerase
868	 62.40	0	1004266..1006095	+	609	58580596	typA	XOO0973	-	GTP-binding elongation factor protein
869	 67.14	0	1006165..1006584	+	139	58580597	-	XOO0974	-	hypothetical protein
870	 66.89	0	1006807..1007244	+	145	58580598	gatAX	XOO0975	-	Glu-tRNAGln amidotransferase A subunit
871	 63.92	0	1007507..1008634	-	375	122879060	-	XOO0976	-	membrane protein
872	 63.27	0	1008735..1010117	-	460	122879061	dhs1	XOO0977	-	family II 2-keto-3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
873	 62.19	0	1010365..1012488	+	707