IslandPathversion 1.0

IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 63.81 STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
733	 63.53	0	843573..844559	-	328	58580450	-	XOO0827	-	IS1404 transposase
734	 58.73	-1	845155..845280	-	41	58580452	-	XOO0829	-	hypothetical protein
735	 67.59	+1	845302..845625	-	107	58580453	-	XOO0830	-	hypothetical protein
736	 62.11	0	845612..848554	-	980	58580454	valS	XOO0831	-	valyl-tRNA synthetase
737	 69.01	+1	848762..849187	-	141	58580455	holC	XOO0832	-	DNA polymerase III subunit chi
738	 68.63	+1	849228..849533	-	101	121632040	-	XOO4730	-	hypothetical protein
739	 68.91	+1	849533..851005	-	490	58580457	pepA	XOO0834	-	leucyl aminopeptidase
740	 64.40	0	852108..853298	+	396	58580459	-	XOO0836	-	hypothetical protein
741	 50.31	-2	853444..853602	+	52	58580460	-	XOO0837	-	hypothetical protein
742	 66.24	0	853713..854180	-	155	122879052	-	XOO0838	-	hypothetical protein
743	 68.31	+1	854607..855578	+	323	161899015	xerD	XOO0839	-	site-specific tyrosine recombinase XerD
744	 66.54	0	856033..856830	+	265	58580463	dsbC	XOO0840	-	disulfide isomerase
745	 67.58	+1	857229..861281	+	1350	58580464	purL	XOO0841	-	phosphoribosylformylglycinamidine synthase
746	 67.22	0	862259..866056	+	1265	58580465	xadA	XOO0842	-	outer membrane protein
747	 64.55	0	867084..867272	+	62	58580467	-	XOO0844	-	protease
748	 66.12	0	867613..868158	+	181	58580469	-	XOO0846	-	protease
749	 62.27	0	868333..870015	+	560	58580470	xpsE	XOO0847	-	general secretion pathway protein E
750	 63.88	0	870191..871408	+	405	58580471	xpsF	XOO0848	-	general secretion pathway protein F
751	 61.79	0	871616..872107	+	163	58580472	xpsG	XOO0849	-	general secretion pathway protein G
752	 68.24	+1	872117..872626	+	169	58580473	xpsH	XOO0850	-	general secretion pathway protein H
753	 64.75	0	872623..873039	+	138	58580474	xpsI	XOO0851	-	general secretion pathway protein I
754	 64.15	0	873036..873671	+	211	58580475	xpsJ	XOO0852	-	general secretion pathway protein J
755	 66.00	0	873614..874519	+	301	58580476	xpsK	XOO0853	-	general secretion pathway protein K
756	 66.40	0	874492..875637	+	381	58580477	xpsL	XOO0854	-	general secretion pathway protein L
757	 66.08	0	875591..876274	+	227	58580478	xpsM	XOO0855	-	general secretion pathway protein M
758	 68.87	+1	876264..877079	+	271	58580479	xpsN	XOO0856	-	general secretion pathway protein N
759	 62.43	0	877076..879388	+	770	58580480	xpsD	XOO0857	-	general secretion pathway protein D
760	 67.98	+1	879385..880224	+	279	58580481	-	XOO0858	-	hypothetical protein
761	 64.75	0	880648..881376	-	242	58580482	-	XOO0859	-	putative transcriptional regulator
762	 63.23	0	881482..882324	-	280	58580483	-	XOO0860	-	putative transporter
763	 65.08	0	882433..884634	-	733	58580484	bfrC	XOO0861	-	iron receptor
764	 67.16	0	884631..885845	-	404	58580485	-	XOO0862	-	hypothetical protein
765	 66.80	0	886474..887238	+	254	58580486	-	XOO0863	-	putative glycosyl transferase
766	 63.75	0	887280..888068	+	262	58580487	-	XOO0864	-	putative transposase
767	 66.67	0	888069..888167	-	32	121632041	-	XOO4731	-	transposase
768	 60.51	0	888318..888593	+	91	58580488	-	XOO0865	-	putative transposase
769	 59.79	-1	892705..892995	-	96	58580489	-	XOO0866	-	hypothetical protein
770	 66.11	0	893010..894083	-	357	58580490	-	XOO0867	-	hypothetical protein
771	 68.40	+1	894047..894679	-	210	58580491	-	XOO0868	-	endonuclease
772	 62.86	0	894699..895565	-	288	58580492	-	XOO0869	-	hypothetical protein
773	 63.69	0	895562..897406	-	614	58580493	-	XOO0870	-	hypothetical protein
774	 66.07	0	897403..898077	-	224	58580494	-	XOO0871	-	hypothetical protein
775	 63.70	0	898205..900496	-	763	58580495	-	XOO0872	-	hypothetical protein
776	 63.64	0	900621..901247	+	208	58580497	-	XOO0874	-	transposase
777	 62.06	0	901294..901575	+	93	58580498	-	XOO0875	-	transposase
778	 68.58	+1	901966..902541	-	191	58580499	maf	XOO0876	-	Maf-like protein
779	 59.91	-1	902513..903163	+	216	58580500	-	XOO0877	-	hypothetical protein
780	 61.03	0	903262..903456	+	64	121632042	rpmF	XOO4732	-	50S ribosomal protein L32
781	 62.37	0	903546..904523	+	325	161899014	fabH	XOO0878	-	3-oxoacyl-(acyl carrier protein) synthase III
782	 64.63	0	904753..905193	+	146	58580502	-	XOO0879	-	hypothetical protein
783	 69.84	+1	905471..906415	+	314	58580503	fabD	XOO0880	-	acyl-carrier-protein S-malonyltransferase
784	 65.27	0	906384..907241	+	285	58580504	fabG	XOO0881	-	3-ketoacyl-(acyl-carrier-protein) reductase
785	 56.67	-2	907446..907685	+	79	161899013	acpP	XOO0882	-	acyl carrier protein
786	 63.28	0	907764..909062	+	432	58580506	fabF	XOO0883	-	3-oxoacyl-(acyl carrier protein) synthase II
787	 68.81	+1	909233..910588	+	451	58580507	trpE	XOO0884	-	hypothetical protein
788	 68.16	+1	910649..911722	+	357	58580508	-	XOO0885	-	hypothetical protein
789	 68.54	+1	911719..912678	+	319	58580509	holB	XOO0886	-	DNA polymerase III subunit delta'
790	 63.28	0	912675..913028	+	117	58580510	pilZ	XOO0887	-	type IV fimbriae assembly protein
791	 59.49	-1	914984..915373	+	129	58580513	-	XOO0890	-	hypothetical protein
792	 65.37	0	915609..917384	-	591	58580514	prpR	XOO0891	-	propionate catabolism regulatory protein
793	 66.00	0	917353..918249	+	298	161899012	prpB	XOO0892	-	2-methylisocitrate lyase
794	 60.85	0	918310..919479	+	389	58580516	prpC	XOO0893	-	methylcitrate synthase
795	 63.31	0	919646..922237	+	863	122879053	acnA	XOO0894	-	aconitate hydratase
796	 67.39	+1	922560..922697	+	45	58580518	-	XOO0895	-	hypothetical protein
797	 65.83	0	922970..924169	+	399	58580519	-	XOO0896	-	hypothetical protein
798	 63.51	0	924669..926885	+	738	122879054	fyuA	XOO0897	-	TonB-dependent receptor
799	 66.86	0	926925..927962	+	345	58580521	-	XOO0898	-	inosine-uridine preferring nucleoside hydrolase
800	 59.56	-1	928072..928254	-	60	58580522	-	XOO0899	-	hypothetical protein
801	 64.32	0	928287..929009	+	240	58580523	-	XOO0900	-	hypothetical protein
802	 60.41	0	929234..932221	+	995	122879055	fecA	XOO0901	-	TonB-dependent receptor
803	 63.14	0	932522..933343	+	273	122879056	glpQ	XOO0902	-	glycerophosphodiester phosphodiesterase
804	 68.07	+1	933669..934382	+	237	58580526	-	XOO0903	-	hypothetical protein
805	 63.36	0	934342..935400	+	352	58580527	-	XOO0904	-	putative ISXo8 transposase
806	 58.77	-1	935541..935768	+	75	58580528	-	XOO0905	-	putative ISXo8 transposase
807	 59.39	-1	936060..937076	+	338	58580529	tnpA	XOO0906	-	transposase
808	 59.89	-1	937210..937770	-	186	58580530	-	XOO0907	-	bacterioferritin
809	 62.73	0	937813..938295	-	160	58580531	-	XOO0908	-	peroxiredoxin
810	 62.85	0	938359..938934	+	191	58580532	hspA	XOO0909	-	low molecular weight heat shock protein
811	 67.44	+1	939345..940244	+	299	58580533	cbpA	XOO0910	-	curved DNA binding protein
812	 58.40	-1	940484..940870	+	128	58580534	pilH	XOO0911	-	PilH family regulatory protein
813	 66.16	0	941449..942627	+	392	58580535	hflK	XOO0912	-	integral membrane protease subunit
814	 63.08	0	942627..943490	+	287	58580536	hflC	XOO0913	-	integral membrane proteinase subunit
815	 64.52	0	943784..943969	+	61	58580537	-	XOO0914	-	hypothetical protein
816	 65.51	0	944124..945599	+	491	58580538	purA	XOO0915	-