IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
532	 58.88	-1	634333..634743	+	136	122879032	-	XOO0606	-	XorII very-short-patch-repair endonuclease
533	 57.04	-1	634770..636098	+	442	58580230	-	XOO0607	-	modification methylase XorII
534	 55.89	-2	636095..636892	+	265	58580231	afa22MI-R	XOO0608	-	endonuclease
535	 57.25	-1	637152..638426	-	424	58580232	int	XOO0609	-	phage-related integrase
536	 63.77	0	638560..638766	-	68	58580233	-	XOO0610	-	hypothetical protein
537	 68.50	+1	638763..639035	-	90	58580234	-	XOO0611	-	hypothetical protein
538	 65.85	0	639274..639396	-	40	58580235	-	XOO0612	-	hypothetical protein
539	 59.69	-1	639421..639549	-	42	58580236	-	XOO0613	-	hypothetical protein
540	 60.00	-1	639754..639858	+	34	58580237	-	XOO0614	-	IS1404 transposase
541	 63.03	0	641213..642448	-	411	58580241	-	XOO0618	-	transposase
542	 63.03	0	643229..644245	-	338	58580243	-	XOO0620	-	transposase
543	 60.22	-1	644416..644865	-	149	58580244	tnpA	XOO0621	-	transposase
544	 59.74	-1	644900..645202	+	100	58580245	-	XOO0622	-	IS1404 transposase
545	 64.93	0	646103..647602	+	499	58580247	-	XOO0624	-	hypothetical protein
546	 64.16	0	647557..648870	+	437	58580248	-	XOO0625	-	hypothetical protein
547	 64.19	0	648960..651101	+	713	58580249	-	XOO0626	-	ferrichrome-iron receptor 3
548	 65.17	0	651186..651851	-	221	58580250	-	XOO0627	-	hypothetical protein
549	 65.04	0	651848..652522	-	224	58580251	-	XOO0628	-	hypothetical protein
550	 65.12	0	652519..655239	-	906	58580252	-	XOO0629	-	hypothetical protein
551	 67.60	+1	655187..655936	-	249	58580253	-	XOO0630	-	hypothetical protein
552	 61.03	0	656263..656475	+	70	58580254	-	XOO0631	-	hypothetical protein
553	 60.36	0	656896..657117	-	73	58580255	-	XOO0632	-	hypothetical protein
554	 62.70	0	657127..657378	-	83	58580256	-	XOO0633	-	hypothetical protein
555	 59.39	-1	657833..657997	+	54	58580257	-	XOO0634	-	hypothetical protein
556	 61.03	0	658083..658862	-	259	58580258	ybdR	XOO0635	-	Zn-dependent alcohol dehydrogenase
557	 59.09	-1	659168..659563	-	131	58580259	-	XOO0636	-	putative transposase
558	 58.33	-1	659529..659900	-	123	58580260	-	XOO0637	-	putative transposase
559	 61.95	0	659970..660986	-	338	58580261	cioB	XOO0638	-	cyanide insensitive terminal oxidase
560	 63.86	0	660977..662332	-	451	58580262	cioA	XOO0639	-	cyanide insensitive terminal oxidase
561	 67.54	+1	662396..662968	-	190	58580263	-	XOO0640	-	hypothetical protein
562	 63.28	0	663484..664782	+	432	58580264	-	XOO0641	-	NtrC family transcriptional regulator
563	 62.55	0	664782..665048	+	88	58580265	-	XOO0642	-	hypothetical protein
564	 62.99	0	665017..665397	-	126	58580266	exsF	XOO0643	-	regulatory protein
565	 62.87	0	665623..667332	+	569	122879033	cheR	XOO0644	-	methyltransferase
566	 61.54	0	667320..667592	+	90	58580268	cheR	XOO0645	-	methyltransferase
567	 59.09	-1	667637..667900	+	87	121632034	-	XOO4723	-	IS1404 transposase
568	 63.12	0	667753..668739	+	328	58580269	-	XOO0646	-	IS1404 transposase
569	 62.47	0	668873..670255	-	460	122879034	-	XOO0647	-	putative ISXo8 transposase
570	 60.14	-1	670635..670910	+	91	58580271	-	XOO0648	-	hypothetical protein
571	 66.75	0	671219..672433	-	404	58580272	-	XOO0649	-	D-amino acid oxidase
572	 65.19	0	672708..673250	+	180	58580273	-	XOO0650	-	hypothetical protein
573	 65.91	0	673251..674039	+	262	58580275	-	XOO0652	-	hypothetical protein
574	 63.84	0	674760..675854	+	364	58580278	-	XOO0655	-	transposase
575	 62.69	0	675941..676141	+	66	58580279	algR	XOO0656	-	transcriptional regulator protein
576	 63.55	0	676264..676584	+	106	58580280	-	XOO0657	-	hypothetical protein
577	 65.57	0	676803..678437	+	544	58580282	ybeC	XOO0659	-	amino acid transporter
578	 62.69	0	678769..679674	-	301	58580283	-	XOO0660	-	hypothetical protein
579	 66.67	0	680520..680852	+	110	121632035	-	XOO4724	-	hypothetical protein
580	 63.45	0	681181..683295	-	704	58580285	-	XOO0662	-	metallopeptidase
581	 65.52	0	683401..684096	-	231	122879035	-	XOO0663	-	hypothetical protein
582	 64.76	0	684337..685332	-	331	58580287	-	XOO0664	-	oxidoreductase
583	 64.91	0	685472..686041	-	189	122879036	wrbA	XOO0665	-	tryptophan repressor binding protein
584	 64.54	0	686154..686435	+	93	58580289	-	XOO0666	-	hypothetical protein
585	 71.25	+2	686533..687012	+	159	58580290	-	XOO0667	-	hypothetical protein
586	 66.12	0	686988..687353	+	121	58580291	-	XOO0668	-	hypothetical protein
587	 63.86	0	687551..688795	+	414	58580292	-	XOO0669	-	hypothetical protein
588	 65.94	0	688802..689908	+	368	58580293	-	XOO0670	-	DNA polymerase related protein
589	 61.74	0	690901..691509	-	202	58580294	-	XOO0671	-	hypothetical protein
590	 63.19	0	691826..693061	-	411	58580295	-	XOO0672	-	transposase
591	 65.51	0	693252..694289	-	345	58580297	-	XOO0674	-	putative transposase
592	 59.58	-1	694547..694927	+	126	121632036	-	XOO4725	-	hypothetical protein
593	 65.51	0	695395..697032	+	545	122879037	yjcE	XOO0675	-	Na+:H+ antiporter
594	 62.65	0	697279..698223	+	314	58580299	yadG	XOO0676	-	ABC transporter ATP-binding protein
595	 61.11	0	698226..698981	+	251	58580300	-	XOO0677	-	ABC-2 type transporter
596	 64.60	0	699396..699782	-	128	58580301	-	XOO0678	-	hypothetical protein
597	 63.25	0	699750..700364	+	204	58580302	-	XOO0679	-	hypothetical protein
598	 66.77	0	700493..702400	-	635	122879038	-	XOO0680	-	protease
599	 69.91	+1	702447..705530	-	1027	122879039	xadA	XOO0681	-	outer membrane protein
600	 65.46	0	705253..706995	+	580	58580305	cvgSY	XOO0682	-	histidine kinase/response regulator hybrid protein
601	 65.43	0	706977..707705	-	242	58580306	-	XOO0683	-	two-component response regulator
602	 67.02	0	707881..708165	-	94	121632037	-	XOO4727	-	hypothetical protein
603	 66.14	0	708174..708740	-	188	58580308	-	XOO0685	-	hypothetical protein
604	 65.43	0	709127..710260	-	377	58580310	motB	XOO0687	-	flagellar motor protein MotB
605	 61.99	0	710271..711125	-	284	58580311	motA	XOO0688	-	flagellar motor protein MotA
606	 64.58	0	711223..711462	-	79	58580312	-	XOO0689	-	hypothetical protein
607	 65.16	0	712020..712484	-	154	58580313	-	XOO0690	-	methionine sulfoxide reductase B
608	 70.78	+1	712753..713190	+	145	58580314	-	XOO0691	-	hypothetical protein
609	 63.12	0	713242..713721	-	159	58580315	lrp	XOO0692	-	leucine responsive regulatory protein
610	 67.98	+1	713870..715159	+	429	161899017	dadA	XOO0693	-	D-amino acid dehydrogenase small subunit
611	 68.30	+1	715159..716259	+	366	58580317	alr	XOO0694	-	alanine racemase
612	 65.78	0	716662..717336	-	224	58580318	-	XOO0695	-	hypothetical protein
613	 63.25	0	717431..717928	+	165	58580319	-	XOO0696	-	hypothetical protein
614	 65.15	0	717894..718223	+	109	58580320	-	XOO0697	-	hypothetical protein
615	 63.82	0	718310..720346	+	678	58580321	-	XOO0698	-	sensor histidine kinase
616	 60.47	0	720801..721139	+	112	58580322	-	XOO0699	-	hypothetical protein
617	 63.90	0	721228..722565	+	44