IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
378	 67.55	+1	449209..449661	-	150	58580063	-	XOO0440	-	hypothetical protein
379	 68.06	+1	449981..450628	+	215	58580065	-	XOO0442	-	integral membrane protein
380	 66.45	0	450625..451533	+	302	58580066	-	XOO0443	-	hypothetical protein
381	 65.88	0	451613..452749	-	378	58580067	-	XOO0444	-	hypothetical protein
382	 66.67	0	452907..453221	-	104	58580068	-	XOO0445	-	hypothetical protein
383	 65.36	0	453429..453962	-	177	58580069	yodB	XOO0446	-	cytochrome B561
384	 67.86	+1	453959..455050	-	363	58580070	srpA	XOO0447	-	catalase
385	 66.28	0	455215..455730	+	171	58580071	prtI	XOO0448	-	ECF sigma factor
386	 67.73	+1	455727..456479	+	250	58580072	prtR	XOO0449	-	transmembrane regulator protein prtR
387	 67.69	+1	456535..457905	-	456	58580073	-	XOO0450	-	leucine aminopeptidase
388	 66.67	0	457946..458683	-	245	58580074	-	XOO0451	-	hydrolase
389	 62.91	0	458815..459984	-	389	58580075	yhhT	XOO0452	-	transport protein
390	 67.00	0	461057..461956	+	299	58580076	ubiA	XOO0453	-	4-hydroxybenzoate octaprenyltransferase
391	 69.13	+1	462236..462967	-	243	58580077	comF	XOO0454	-	competence protein F
392	 65.99	0	463011..464045	+	344	122879020	bioB	XOO0455	-	biotin synthase
393	 67.79	+1	464002..465342	+	446	58580079	bioF	XOO0456	-	8-amino-7-oxononanoate synthase
394	 62.37	0	465695..466741	+	348	58580080	-	XOO0457	-	putative transposase
395	 63.91	0	466981..467742	+	253	58580082	fabG	XOO0459	-	3-ketoacyl-(acyl-carrier-protein) reductase
396	 62.72	0	468271..469893	-	540	58580083	-	XOO0460	-	halogenase
397	 67.76	+1	469890..470711	-	273	58580084	-	XOO0461	-	dolichyl-phosphate mannose synthase related protein
398	 71.58	+2	470708..471481	-	257	58580085	-	XOO0462	-	hypothetical protein
399	 69.19	+1	471481..472707	-	408	58580086	fabF	XOO0463	-	3-oxoacyl-(acyl carrier protein) synthase I
400	 62.27	0	472728..473159	+	143	58580087	-	XOO0464	-	hypothetical protein
401	 63.31	0	476843..478690	+	615	58580089	-	XOO0466	-	hypothetical protein
402	 63.33	0	478687..480483	+	598	58580090	zwf	XOO0467	-	glucose-6-phosphate 1-dehydrogenase
403	 63.53	0	481071..482282	+	403	58580091	-	XOO0468	-	putative ISXo8 transposase
404	 65.40	0	482382..484199	-	605	58580092	kefC	XOO0469	-	glutathione-regulated potassium-efflux system protein
405	 65.28	0	484877..486244	+	455	58580093	mgtE	XOO0470	-	Mg++ transporter
406	 65.37	0	486316..486930	+	204	122879021	-	XOO0471	-	hypothetical protein
407	 69.32	+1	487217..489925	+	902	58580095	-	XOO0472	-	hypothetical protein
408	 63.22	0	490032..491075	+	347	122879022	-	XOO0473	-	integral membrane protein
409	 62.87	0	491672..494170	+	832	161899022	nrdA	XOO0474	-	ribonucleotide-diphosphate reductase subunit alpha
410	 57.47	-1	494347..495390	+	347	58580098	nrdF	XOO0475	-	ribonucleotide-diphosphate reductase subunit beta
411	 63.95	0	496273..496788	+	171	58580099	-	XOO0476	-	flavodoxin
412	 65.44	0	496760..497086	+	108	58580100	trxA	XOO0477	-	thioredoxin
413	 59.09	-1	497300..497563	+	87	121632029	-	XOO4716	-	IS1404 transposase
414	 63.83	0	497416..498402	+	328	58580101	-	XOO0478	-	IS1404 transposase
415	 72.10	+2	498642..498917	+	91	58580103	gctB	XOO0480	-	glutaconate CoA transferase subunit B
416	 67.58	+1	498914..500122	+	402	58580104	pcaF	XOO0481	-	beta-ketoadipyl CoA thiolase
417	 65.84	0	500201..500929	+	242	58580105	pcaH	XOO0482	-	protocatechuate 3,4-dioxygenase beta chain
418	 67.38	+1	500934..501497	+	187	58580106	pcaG	XOO0483	-	protocatechuate 3,4-dioxygenase alpha chain
419	 68.30	+1	501944..503350	+	468	58580107	pcaB	XOO0484	-	3-carboxy-cis,cis-muconate cycloisomerase
420	 66.41	0	503361..504143	+	260	58580108	catD	XOO0485	-	b-ketoadipate enol-lactone hydrolase
421	 65.27	0	504154..504582	+	142	58580109	pcaC	XOO0486	-	4-carboxymuconolactone decarboxylase
422	 69.52	+1	504853..505692	+	279	58580110	-	XOO0487	-	hydrolase
423	 67.71	+1	506040..506711	-	223	58580111	pcaR	XOO0488	-	transcriptional regulator
424	 64.46	0	507049..507909	+	286	58580112	-	XOO0489	-	hypothetical protein
425	 64.38	0	508139..508618	+	159	58580113	-	XOO0490	-	hypothetical protein
426	 66.78	0	508877..509746	-	289	58580114	-	XOO0491	-	oxidoreductase
427	 68.60	+1	509727..510191	-	154	58580115	-	XOO0492	-	hypothetical protein
428	 69.39	+1	510198..511079	-	293	58580116	-	XOO0493	-	hypothetical protein
429	 64.52	0	511259..513031	-	590	58580117	argS	XOO0494	-	arginyl-tRNA synthetase
430	 68.17	+1	513035..513766	-	243	58580118	radC	XOO0495	-	DNA repair protein RadC
431	 68.16	+1	513809..515083	+	424	58580119	dfp	XOO0496	-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
432	 68.59	+1	515080..515547	+	155	58580120	dut	XOO0497	-	deoxyuridine 5'-triphosphate nucleotidohydrolase
433	 64.59	0	516515..517909	+	464	122879023	algC	XOO0498	-	phosphomannomutase
434	 66.49	0	518017..518592	-	191	58580122	-	XOO0499	-	hypothetical protein
435	 60.23	-1	518983..519324	-	113	58580123	-	XOO0500	-	hypothetical protein
436	 64.44	0	519324..520130	-	268	58580124	dpm1	XOO0501	-	dolichol-phosphate mannosyltransferase
437	 65.89	0	520401..521435	-	344	58580125	wbnF	XOO0502	-	nucleotide sugar epimerase
438	 65.05	0	521572..521880	-	102	58580126	mcrB	XOO0503	-	mitomycin resistance protein
439	 68.49	+1	521916..522845	-	309	58580127	parB	XOO0504	-	chromosome partitioning protein
440	 65.91	0	522845..523642	-	265	58580128	parA	XOO0505	-	chromosome partitioning protein
441	 67.99	+1	523756..524433	-	225	58580129	-	XOO0506	-	hypothetical protein
442	 67.88	+1	524459..525118	-	219	161899021	pyrE	XOO0508	-	orotate phosphoribosyltransferase
443	 63.29	0	525189..526046	+	285	58580132	exoA	XOO0509	-	exodeoxyribonuclease III
444	 63.27	0	526366..527661	+	431	58580133	ampG	XOO0510	-	signal transducer
445	 60.53	0	527720..527947	+	75	58580134	-	XOO0511	-	hypothetical protein
446	 68.78	+1	527985..529118	-	377	58580135	anmK	XOO0512	-	anhydro-N-acetylmuramic acid kinase
447	 64.90	0	529489..530907	-	472	58580136	-	XOO0513	-	hypothetical protein
448	 61.60	0	531365..532291	+	308	58580138	tyrS	XOO0515	-	tyrosyl-tRNA synthetase
449	 61.84	0	538321..538797	-	158	58580139	-	XOO0516	-	IS1404 transposase
450	 59.85	-1	539160..539423	-	87	121632030	-	XOO4717	-	IS1404 transposase
451	 66.97	0	539918..542227	-	769	58580142	-	XOO0519	-	two-component system sensor protein
452	 67.65	+1	542228..544054	-	608	122879024	-	XOO0520	-	two-component system regulatory protein
453	 68.96	+1	544237..544890	-	217	58580144	-	XOO0521	-	hypothetical protein
454	 65.45	0	545004..545741	+	245	122879025	-	XOO0522	-	hypothetical protein
455	 61.84	0	545745..545972	+	75	58580146	-	XOO0523	-	hypothetical protein
456	 65.71	0	545985..546194	+	69	58580147	-	XOO0524	-	hypothetical protein
457	 62.59	0	546237..546653	+	138	58580148	-	XOO0525	-	iron-sulfur cluster insertion protein ErpA
458	 60.63	0	547535..548860	+	441	58580149	-	XOO0526	-	hypothetical protein
459	 66.78	0	549167..550057	+	296	122879026	nudC	XOO0527	-	NADH pyrophosphatase
460	 66.89	0	550131..551021	+	296	58580151	ampE	XOO0528	-	transmembrane protein
461	 54.86	-2	551753..552133	-	126