version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 357 65.22 0 427249..427455 - 68 58580043 - XOO0420 - hypothetical protein 358 67.66 +1 427652..428656 + 334 58580044 - XOO0421 - tRNA-dihydrouridine synthase A 359 66.94 0 428936..429295 + 119 58580045 - XOO0422 - hypothetical protein 360 59.36 -1 429367..430050 + 227 58580046 phoP XOO0423 - two-component system regulatory protein 361 63.84 0 430080..431495 + 471 58580047 phoQ XOO0424 - two-component system sensor protein 362 63.73 0 431574..433205 + 543 58580048 - XOO0425 - hypothetical protein 363 63.64 0 433256..434509 + 417 58580049 - XOO0426 - hypothetical protein 364 61.48 0 434662..435297 - 211 58580050 - XOO0427 - hypothetical protein 365 69.98 +1 436095..437060 + 321 161899023 birA XOO0428 - biotin--protein ligase 366 71.33 +2 437057..437785 + 242 58580052 baf XOO0429 - pantothenate kinase 367 69.46 +1 437795..438724 + 309 122879018 - XOO0430 - hypothetical protein 368 69.59 +1 439528..440211 - 227 58580054 tdk XOO0431 - thymidylate kinase 369 63.97 0 440691..440987 - 98 58580055 - XOO0432 - hypothetical protein 370 62.50 0 440994..441233 - 79 58580056 - XOO0433 - hypothetical protein 371 66.67 0 441230..441904 - 224 58580057 - XOO0434 - hypothetical protein 372 66.96 0 442136..443149 + 337 58580058 argI XOO0435 - arginase 373 61.48 0 443473..443607 + 44 121632028 - XOO4713 - hypothetical protein 374 57.54 -1 443776..444060 + 94 58580059 - XOO0436 - hypothetical protein 375 62.33 0 444229..445518 + 429 58580060 trpS XOO0437 - tryptophanyl-tRNA synthetase 376 63.93 0 445571..446593 + 340 58580061 - XOO0438 - beta-lactamase related protein 377 65.24 0 447032..448708 + 558 122879019 - XOO0439 - peptidase 378 67.55 +1 449209..449661 - 150 58580063 - XOO0440 - hypothetical protein 379 68.06 +1 449981..450628 + 215 58580065 - XOO0442 - integral membrane protein 380 66.45 0 450625..451533 + 302 58580066 - XOO0443 - hypothetical protein 381 65.88 0 451613..452749 - 378 58580067 - XOO0444 - hypothetical protein 382 66.67 0 452907..453221 - 104 58580068 - XOO0445 - hypothetical protein 383 65.36 0 453429..453962 - 177 58580069 yodB XOO0446 - cytochrome B561 384 67.86 +1 453959..455050 - 363 58580070 srpA XOO0447 - catalase 385 66.28 0 455215..455730 + 171 58580071 prtI XOO0448 - ECF sigma factor 386 67.73 +1 455727..456479 + 250 58580072 prtR XOO0449 - transmembrane regulator protein prtR 387 67.69 +1 456535..457905 - 456 58580073 - XOO0450 - leucine aminopeptidase 388 66.67 0 457946..458683 - 245 58580074 - XOO0451 - hydrolase 389 62.91 0 458815..459984 - 389 58580075 yhhT XOO0452 - transport protein 390 67.00 0 461057..461956 + 299 58580076 ubiA XOO0453 - 4-hydroxybenzoate octaprenyltransferase 391 69.13 +1 462236..462967 - 243 58580077 comF XOO0454 - competence protein F 392 65.99 0 463011..464045 + 344 122879020 bioB XOO0455 - biotin synthase 393 67.79 +1 464002..465342 + 446 58580079 bioF XOO0456 - 8-amino-7-oxononanoate synthase 394 62.37 0 465695..466741 + 348 58580080 - XOO0457 - putative transposase 395 63.91 0 466981..467742 + 253 58580082 fabG XOO0459 - 3-ketoacyl-(acyl-carrier-protein) reductase 396 62.72 0 468271..469893 - 540 58580083 - XOO0460 - halogenase 397 67.76 +1 469890..470711 - 273 58580084 - XOO0461 - dolichyl-phosphate mannose synthase related protein 398 71.58 +2 470708..471481 - 257 58580085 - XOO0462 - hypothetical protein 399 69.19 +1 471481..472707 - 408 58580086 fabF XOO0463 - 3-oxoacyl-(acyl carrier protein) synthase I 400 62.27 0 472728..473159 + 143 58580087 - XOO0464 - hypothetical protein 401 63.31 0 476843..478690 + 615 58580089 - XOO0466 - hypothetical protein 402 63.33 0 478687..480483 + 598 58580090 zwf XOO0467 - glucose-6-phosphate 1-dehydrogenase 403 63.53 0 481071..482282 + 403 58580091 - XOO0468 - putative ISXo8 transposase 404 65.40 0 482382..484199 - 605 58580092 kefC XOO0469 - glutathione-regulated potassium-efflux system protein 405 65.28 0 484877..486244 + 455 58580093 mgtE XOO0470 - Mg++ transporter 406 65.37 0 486316..486930 + 204 122879021 - XOO0471 - hypothetical protein 407 69.32 +1 487217..489925 + 902 58580095 - XOO0472 - hypothetical protein 408 63.22 0 490032..491075 + 347 122879022 - XOO0473 - integral membrane protein 409 62.87 0 491672..494170 + 832 161899022 nrdA XOO0474 - ribonucleotide-diphosphate reductase subunit alpha 410 57.47 -1 494347..495390 + 347 58580098 nrdF XOO0475 - ribonucleotide-diphosphate reductase subunit beta 411 63.95 0 496273..496788 + 171 58580099 - XOO0476 - flavodoxin 412 65.44 0 496760..497086 + 108 58580100 trxA XOO0477 - thioredoxin 413 59.09 -1 497300..497563 + 87 121632029 - XOO4716 - IS1404 transposase 414 63.83 0 497416..498402 + 328 58580101 - XOO0478 - IS1404 transposase 415 72.10 +2 498642..498917 + 91 58580103 gctB XOO0480 - glutaconate CoA transferase subunit B 416 67.58 +1 498914..500122 + 402 58580104 pcaF XOO0481 - beta-ketoadipyl CoA thiolase 417 65.84 0 500201..500929 + 242 58580105 pcaH XOO0482 - protocatechuate 3,4-dioxygenase beta chain 418 67.38 +1 500934..501497 + 187 58580106 pcaG XOO0483 - protocatechuate 3,4-dioxygenase alpha chain 419 68.30 +1 501944..503350 + 468 58580107 pcaB XOO0484 - 3-carboxy-cis,cis-muconate cycloisomerase 420 66.41 0 503361..504143 + 260 58580108 catD XOO0485 - b-ketoadipate enol-lactone hydrolase 421 65.27 0 504154..504582 + 142 58580109 pcaC XOO0486 - 4-carboxymuconolactone decarboxylase 422 69.52 +1 504853..505692 + 279 58580110 - XOO0487 - hydrolase 423 67.71 +1 506040..506711 - 223 58580111 pcaR XOO0488 - transcriptional regulator 424 64.46 0 507049..507909 + 286 58580112 - XOO0489 - hypothetical protein 425 64.38 0 508139..508618 + 159 58580113 - XOO0490 - hypothetical protein 426 66.78 0 508877..509746 - 289 58580114 - XOO0491 - oxidoreductase 427 68.60 +1 509727..510191 - 154 58580115 - XOO0492 - hypothetical protein 428 69.39 +1 510198..511079 - 293 58580116 - XOO0493 - hypothetical protein 429 64.52 0 511259..513031 - 590 58580117 argS XOO0494 - arginyl-tRNA synthetase 430 68.17 +1 513035..513766 - 243 58580118 radC XOO0495 - DNA repair protein RadC 431 68.16 +1 513809..515083 + 424 58580119 dfp XOO0496 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 432 68.59 +1 515080..515547 + 155 58580120 dut XOO0497 - deoxyuridine 5'-triphosphate nucleotidohydrolase 433 64.59 0 516515..517909 + 464 122879023 algC XOO0498 - phosphomannomutase 434 66.49 0 518017..518592 - 191 58580122 - XOO0499 - hypothetical protein 435 60.23 -1 518983..519324 - 113 58580123 - XOO0500 - hypothetical protein 436 64.44 0 519324..520130 - 268 58580124 dpm1 XOO0501 - dolichol-phosphate mannosyltransferase 437 65.89 0 520401..521435 - 344 58580125 wbnF XOO0502 - nucleotide sugar epimerase 438 65.05 0 521572..521880 - 102 58580126 mcrB XOO0503 - mitomycin resistance protein 439 68.49 +1 521916..522845 - 309 58580127 parB XOO0504 - chromosome partitioning protein 440 65.91 0 522845..523642 - 265 58580128 parA XOO0505 - chromosome partitioning protein 441 67.99 +1 523756..524433 - 225 58580129 - XOO0506 - hypothetical protein 442 67.88 +1 524459..525118 - 219 161899021 pyrE XOO0508 - orotate phosphoribosyltransferase 443 63.29 0 525189..526046 + 285 58580132 exoA XOO0509 - exodeoxyribonuclease III 444 63.27 0 526366..527661 + 431 58580133 ampG XOO0510 - signal transducer 445 60.53 0 527720..527947 + 75 58580134 - XOO0511 - hypothetical protein 446 68.78 +1 527985..529118 - 377 58580135 anmK XOO0512 - anhydro-N-acetylmuramic acid kinase 447 64.90 0 529489..530907 - 472 58580136 - XOO0513 - hypothetical protein 448 61.60 0 531365..532291 + 308 58580138 tyrS XOO0515 - tyrosyl-tRNA synthetase 449 61.84 0 538321..538797 - 158 58580139 - XOO0516 - IS1404 transposase 450 59.85 -1 539160..539423 - 87 121632030 - XOO4717 - IS1404 transposase 451 66.97 0 539918..542227 - 769 58580142 - XOO0519 - two-component system sensor protein 452 67.65 +1 542228..544054 - 608 122879024 - XOO0520 - two-component system regulatory protein 453 68.96 +1 544237..544890 - 217 58580144 - XOO0521 - hypothetical protein 454 65.45 0 545004..545741 + 245 122879025 - XOO0522 - hypothetical protein 455 61.84 0 545745..545972 + 75 58580146 - XOO0523 - hypothetical protein 456 65.71 0 545985..546194 + 69 58580147 - XOO0524 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0