IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3976	 63.05	0	4741509..4742477	+	322	58584075	-	XOO4452	-	hypothetical protein
3977	 64.12	0	4742580..4742933	-	117	58584076	-	XOO4453	-	hypothetical protein
3978	 63.37	0	4742924..4743529	-	201	58584077	-	XOO4454	-	hypothetical protein
3979	 63.40	0	4743944..4744402	+	152	58584078	-	XOO4455	-	MarR family transcriptional regulator
3980	 64.23	0	4744399..4744932	+	177	58584079	ohr	XOO4456	-	organic hydroperoxide resistance protein
3981	 66.67	0	4745181..4746044	-	287	58584080	-	XOO4457	-	hypothetical protein
3982	 62.71	0	4746283..4747218	+	311	122879355	-	XOO4458	-	putative transposase
3983	 63.37	0	4747674..4748915	-	413	58584082	-	XOO4459	-	ISxac1 transposase
3984	 59.78	-1	4749220..4749582	-	120	58584083	-	XOO4460	-	hypothetical protein
3985	 58.63	-1	4749648..4749896	+	82	58584084	-	XOO4461	-	DNA-binding protein
3986	 67.87	+1	4751654..4751986	-	110	121632138	-	XOO4946	-	hypothetical protein
3987	 66.46	0	4751979..4752455	-	158	58584085	-	XOO4462	-	hypothetical protein
3988	 65.52	0	4752458..4752892	-	144	58584086	-	XOO4463	-	hypothetical protein
3989	 60.36	0	4753590..4753922	+	110	58584087	-	XOO4464	-	hypothetical protein
3990	 51.52	-2	4754171..4754269	+	32	58584088	-	XOO4465	-	hypothetical protein
3991	 67.81	+1	4754372..4755766	-	464	122879356	-	XOO4466	-	hypothetical protein
3992	 66.32	0	4756704..4756994	-	96	58584090	vapI	XOO4467	-	virulence associated protein
3993	 60.28	-1	4757012..4757293	-	93	58584091	-	XOO4468	-	hypothetical protein
3994	 71.99	+2	4757388..4759697	-	769	58584092	recD	XOO4469	-	exodeoxyribonuclease V alpha chain
3995	 68.71	+1	4759834..4763934	-	1366	58584093	recB	XOO4470	-	exodeoxyribonuclease V beta chain
3996	 68.69	+1	4763904..4767410	-	1168	58584094	recC	XOO4471	-	exodeoxyribonuclease V gamma chain
3997	 59.10	-1	4767721..4770375	+	884	58584095	-	XOO4472	-	hypothetical protein
3998	 69.70	+1	4771430..4774426	-	998	58584098	-	XOO4475	-	hemagglutinin
3999	 54.17	-2	4774434..4774553	+	39	121632139	-	YXOOp17	-	hypothetical protein
4000	 65.02	0	4775117..4775662	+	181	58584100	-	XOO4477	-	microcystin dependent protein
4001	 67.23	0	4775731..4776258	+	175	122879357	-	XOO4476	-	microcystin dependent protein
4002	 65.36	0	4776317..4776853	+	178	58584101	-	XOO4478	-	microcystin dependent protein
4003	 62.77	0	4776881..4777906	+	341	58584102	-	XOO4479	-	transposase
4004	 60.51	0	4777919..4778194	+	91	58584103	-	XOO4480	-	putative transposase
4005	 65.32	0	4778189..4778929	-	246	58584104	sodC2	XOO4481	-	superoxide dismutase
4006	 70.30	+1	4778892..4779497	-	201	58584105	yojM	XOO4482	-	superoxide dismutase like protein
4007	 66.60	0	4779993..4781441	-	482	58584106	ntrC	XOO4483	-	two-component system regulatory protein
4008	 68.28	+1	4781413..4782468	-	351	58584107	ntrB	XOO4484	-	two-component system sensor protein
4009	 66.33	0	4782740..4784215	-	491	58584109	amtB	XOO4486	-	ammonium transporter
4010	 64.60	0	4784205..4784543	-	112	58584110	glnB	XOO4487	-	nitrogen regulatory protein P-II
4011	 61.56	0	4784821..4786230	-	469	58584111	glnA	XOO4488	-	glutamine synthetase
4012	 64.66	0	4786452..4787249	+	265	122879358	uppP	XOO4489	-	undecaprenyl pyrophosphate phosphatase
4013	 70.14	+1	4787386..4788192	+	268	58584113	-	XOO4490	-	hypothetical protein
4014	 65.20	0	4789346..4790095	-	249	58584116	-	XOO4493	-	hypothetical protein
4015	 70.09	+1	4790152..4792224	-	690	58584117	-	XOO4494	-	hypothetical protein
4016	 66.77	0	4792638..4793627	-	329	58584118	-	XOO4495	-	hypothetical protein
4017	 65.89	0	4793687..4794592	-	301	58584119	-	XOO4496	-	acetyltransferase
4018	 65.27	0	4794610..4795038	-	142	122879359	-	XOO4497	-	hypothetical protein
4019	 64.58	0	4795316..4797331	-	671	58584121	cls	XOO4498	-	cardiolipin synthase
4020	 60.38	0	4797328..4797900	-	190	58584122	-	XOO4499	-	hypothetical protein
4021	 70.13	+1	4797904..4798365	-	153	58584123	-	XOO4500	-	hypothetical protein
4022	 65.04	0	4798396..4799196	-	266	58584124	parA	XOO4501	-	partition protein
4023	 63.51	0	4799381..4800298	-	305	58584125	-	XOO4502	-	hypothetical protein
4024	 69.52	+1	4800560..4800769	-	69	58584126	-	XOO4503	-	hypothetical protein
4025	 62.76	0	4800833..4801216	-	127	58584127	-	XOO4504	-	hypothetical protein
4026	 64.64	0	4801390..4805097	+	1235	122879360	iorA	XOO4505	-	indolepyruvate ferredoxin oxidoreductase
4027	 54.75	-2	4805240..4805860	+	206	58584129	-	XOO4506	-	transcriptional regulator
4028	 61.97	0	4805857..4807134	+	425	58584130	hipA	XOO4507	-	HipA
4029	 64.84	0	4807179..4808165	-	328	122879361	-	XOO4508	-	hypothetical protein
4030	 64.42	0	4808162..4809583	-	473	58584132	-	XOO4509	-	hypothetical protein
4031	 65.74	0	4809517..4810698	+	393	58584133	-	XOO4510	-	hypothetical protein
4032	 64.36	0	4810985..4812457	-	490	58584134	yehZ	XOO4511	-	ABC transporter amino acid permease
4033	 66.16	0	4812454..4813236	-	260	58584135	yehX	XOO4512	-	ABC transporter ATP-binding protein
4034	 63.39	0	4813240..4813605	-	121	58584136	-	XOO4513	-	hypothetical protein
4035	 64.01	0	4813625..4814830	-	401	122879362	-	XOO4514	-	fatty acid desaturase
4036	 66.21	0	4814963..4815835	+	290	58584138	ylmA	XOO4515	-	ABC transporter ATP-binding protein
4037	 68.55	+1	4816024..4817034	+	336	58584140	-	XOO4517	-	hypothetical protein
4038	 66.04	0	4817458..4818579	+	373	58584141	-	XOO4518	-	hypothetical protein
4039	 52.38	-2	4819091..4819195	-	34	58584142	fpvA	XOO4519	-	ferripyoverdine receptor
4040	 63.48	0	4819207..4819896	+	229	58584143	-	XOO4520	-	transposase
4041	 60.42	0	4819851..4819946	+	31	121632140	-	XOO4949	-	hypothetical protein
4042	 60.61	0	4819943..4820041	+	32	58584144	-	XOO4521	-	transposase
4043	 65.93	0	4820090..4820224	+	44	58584145	-	XOO4522	-	transposase
4044	 59.47	-1	4822272..4822535	-	87	121632141	-	XOO4950	-	IS1404 transposase
4045	 58.73	-1	4822672..4823049	+	125	58584148	-	XOO4525	-	putative transposase
4046	 65.66	0	4823216..4823713	-	165	58584149	-	XOO4526	-	hypothetical protein
4047	 61.44	0	4823664..4824467	-	267	161898956	dkgB	XOO4527	-	2,5-diketo-D-gluconate reductase B
4048	 63.85	0	4824529..4825557	-	342	122879363	-	XOO4528	-	quinone oxidoreductase
4049	 63.07	0	4825696..4826667	-	323	58584152	mocA	XOO4529	-	oxidoreductase
4050	 62.54	0	4826786..4827754	+	322	58584153	-	XOO4530	-	hypothetical protein
4051	 67.00	0	4827817..4828419	+	200	58584154	-	XOO4531	-	pseudouridylate synthase
4052	 67.35	+1	4828742..4829182	-	146	58584155	-	XOO4532	-	hypothetical protein
4053	 70.43	+1	4829345..4831816	-	823	58584156	hrpB	XOO4533	-	ATP-dependent RNA helicase
4054	 64.77	0	4832535..4833008	-	157	58584157	-	XOO4534	-	hypothetical protein
4055	 66.74	0	4833321..4834640	-	439	58584158	-	XOO4535	-	RTS beta protein
4056	 63.17	0	4835164..4836021	-	285	58584159	-	XOO4536	-	2-hydroxyhepta-2,4-diene-1,7-dioateisomerase/5-carboxymethyl-2-oxo-hex-3-ene-1,7-dioatedecarboxylase
4057	 65.24	0	4836192..4836962	-	256	58584160	ucpA	XOO4537	-	oxidoreductase
4058	 67.24	0	4836959..4837831	-	290	58584161	-	XOO4538	-	hypothetical protein
4059	 69.61	+1	4837828..4838949	-	373