IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
320	 65.77	0	386892..387893	-	333	58580006	czcD	XOO0383	-	heavy metal transporter
321	 59.59	-1	387893..388231	+	112	58580007	-	XOO0384	-	hypothetical protein
322	 60.78	0	388412..388513	+	33	121632026	-	XOO4711	-	hypothetical protein
323	 63.13	0	388711..389304	+	197	58580008	-	XOO0385	-	hypothetical protein
324	 58.71	-1	389301..389501	+	66	58580009	-	XOO0386	-	transcriptional regulator
325	 67.24	0	389598..391163	+	521	58580010	-	XOO0387	-	cysteine proteinase
326	 63.30	0	391081..391941	+	286	58580011	natA	XOO0388	-	sodium ABC transporter ATP-binding protein
327	 63.15	0	391938..393131	+	397	58580012	natB	XOO0389	-	ABC transporter sodium permease
328	 68.72	+1	393541..394563	-	340	58580013	-	XOO0390	-	TonB-like protein
329	 67.56	+1	394703..396274	-	523	58580014	prnA	XOO0391	-	tryptophan halogenase
330	 68.24	+1	396279..397292	-	337	58580015	-	XOO0392	-	Pass1-related protein
331	 62.28	0	397282..398034	-	250	58580016	sapC	XOO0393	-	SapC
332	 63.67	0	398167..401241	-	1024	58580017	iroN	XOO0394	-	TonB-dependent receptor
333	 54.59	-2	401328..401774	+	148	58580018	-	XOO0395	-	transposase
334	 63.04	0	402387..403076	+	229	58580020	gst	XOO0397	-	glutathione S-transferase
335	 64.61	0	403501..405738	+	745	58580021	-	XOO0398	-	dipeptidyl peptidase IV
336	 66.02	0	405890..407737	+	615	58580022	-	XOO0399	-	hypothetical protein
337	 70.81	+2	407837..408295	-	152	58580023	-	XOO0400	-	hypothetical protein
338	 64.45	0	408960..409952	+	330	122879015	hemB	XOO0402	-	delta-aminolevulinic acid dehydratase
339	 70.34	+1	410140..410574	-	144	58580026	-	XOO0403	-	hypothetical protein
340	 71.17	+2	410644..411132	-	162	58580027	-	XOO0404	-	hypothetical protein
341	 67.86	+1	411213..412136	+	307	58580028	-	XOO0405	-	LysR family transcriptional regulator
342	 62.83	0	412264..413070	-	268	58580029	-	XOO0406	-	endonuclease
343	 66.43	0	413250..415784	+	844	122879016	piuB	XOO0407	-	iron-uptake factor
344	 58.97	-1	415958..416347	+	129	58580031	-	XOO0408	-	hypothetical protein
345	 68.21	+1	416407..417315	-	302	58580032	-	XOO0409	-	hypothetical protein
346	 67.84	+1	417341..418192	+	283	121632027	aroE	XOO4712	-	shikimate 5-dehydrogenase
347	 65.91	0	418182..418580	+	132	58580033	-	XOO0410	-	hypothetical protein
348	 66.67	0	418615..418764	+	49	58580034	-	XOO0411	-	hypothetical protein
349	 64.74	0	419042..421174	+	710	122879017	dinG	XOO0412	-	ATP-dependent DNA helicase DinG
350	 60.36	0	421382..421714	+	110	58580036	-	XOO0413	-	membrane-fusion protein
351	 62.95	0	421746..422579	+	277	58580037	-	XOO0414	-	transposase
352	 65.19	0	422628..422762	+	44	58580038	-	XOO0415	-	transposase
353	 56.69	-2	422925..423395	+	156	58580039	-	XOO0416	-	membrane-fusion protein
354	 61.42	0	424086..425609	+	507	58580040	catB	XOO0417	-	catalase precursor
355	 64.24	0	425668..426243	+	191	58580041	ankB	XOO0418	-	ankyrin-like protein
356	 62.67	0	426964..427188	+	74	58580042	-	XOO0419	-	hypothetical protein
357	 65.22	0	427249..427455	-	68	58580043	-	XOO0420	-	hypothetical protein
358	 67.66	+1	427652..428656	+	334	58580044	-	XOO0421	-	tRNA-dihydrouridine synthase A
359	 66.94	0	428936..429295	+	119	58580045	-	XOO0422	-	hypothetical protein
360	 59.36	-1	429367..430050	+	227	58580046	phoP	XOO0423	-	two-component system regulatory protein
361	 63.84	0	430080..431495	+	471	58580047	phoQ	XOO0424	-	two-component system sensor protein
362	 63.73	0	431574..433205	+	543	58580048	-	XOO0425	-	hypothetical protein
363	 63.64	0	433256..434509	+	417	58580049	-	XOO0426	-	hypothetical protein
364	 61.48	0	434662..435297	-	211	58580050	-	XOO0427	-	hypothetical protein
365	 69.98	+1	436095..437060	+	321	161899023	birA	XOO0428	-	biotin--protein ligase
366	 71.33	+2	437057..437785	+	242	58580052	baf	XOO0429	-	pantothenate kinase
367	 69.46	+1	437795..438724	+	309	122879018	-	XOO0430	-	hypothetical protein
368	 69.59	+1	439528..440211	-	227	58580054	tdk	XOO0431	-	thymidylate kinase
369	 63.97	0	440691..440987	-	98	58580055	-	XOO0432	-	hypothetical protein
370	 62.50	0	440994..441233	-	79	58580056	-	XOO0433	-	hypothetical protein
371	 66.67	0	441230..441904	-	224	58580057	-	XOO0434	-	hypothetical protein
372	 66.96	0	442136..443149	+	337	58580058	argI	XOO0435	-	arginase
373	 61.48	0	443473..443607	+	44	121632028	-	XOO4713	-	hypothetical protein
374	 57.54	-1	443776..444060	+	94	58580059	-	XOO0436	-	hypothetical protein
375	 62.33	0	444229..445518	+	429	58580060	trpS	XOO0437	-	tryptophanyl-tRNA synthetase
376	 63.93	0	445571..446593	+	340	58580061	-	XOO0438	-	beta-lactamase related protein
377	 65.24	0	447032..448708	+	558	122879019	-	XOO0439	-	peptidase
378	 67.55	+1	449209..449661	-	150	58580063	-	XOO0440	-	hypothetical protein
379	 68.06	+1	449981..450628	+	215	58580065	-	XOO0442	-	integral membrane protein
380	 66.45	0	450625..451533	+	302	58580066	-	XOO0443	-	hypothetical protein
381	 65.88	0	451613..452749	-	378	58580067	-	XOO0444	-	hypothetical protein
382	 66.67	0	452907..453221	-	104	58580068	-	XOO0445	-	hypothetical protein
383	 65.36	0	453429..453962	-	177	58580069	yodB	XOO0446	-	cytochrome B561
384	 67.86	+1	453959..455050	-	363	58580070	srpA	XOO0447	-	catalase
385	 66.28	0	455215..455730	+	171	58580071	prtI	XOO0448	-	ECF sigma factor
386	 67.73	+1	455727..456479	+	250	58580072	prtR	XOO0449	-	transmembrane regulator protein prtR
387	 67.69	+1	456535..457905	-	456	58580073	-	XOO0450	-	leucine aminopeptidase
388	 66.67	0	457946..458683	-	245	58580074	-	XOO0451	-	hydrolase
389	 62.91	0	458815..459984	-	389	58580075	yhhT	XOO0452	-	transport protein
390	 67.00	0	461057..461956	+	299	58580076	ubiA	XOO0453	-	4-hydroxybenzoate octaprenyltransferase
391	 69.13	+1	462236..462967	-	243	58580077	comF	XOO0454	-	competence protein F
392	 65.99	0	463011..464045	+	344	122879020	bioB	XOO0455	-	biotin synthase
393	 67.79	+1	464002..465342	+	446	58580079	bioF	XOO0456	-	8-amino-7-oxononanoate synthase
394	 62.37	0	465695..466741	+	348	58580080	-	XOO0457	-	putative transposase
395	 63.91	0	466981..467742	+	253	58580082	fabG	XOO0459	-	3-ketoacyl-(acyl-carrier-protein) reductase
396	 62.72	0	468271..469893	-	540	58580083	-	XOO0460	-	halogenase
397	 67.76	+1	469890..470711	-	273	58580084	-	XOO0461	-	dolichyl-phosphate mannose synthase related protein
398	 71.58	+2	470708..471481	-	257	58580085	-	XOO0462	-	hypothetical protein
399	 69.19	+1	471481..472707	-	408	58580086	fabF	XOO0463	-	3-oxoacyl-(acyl carrier protein) synthase I
400	 62.27	0	472728..473159	+	143	58580087	-	XOO0464	-	hypothetical protein
401	 63.31	0	476843..478690	+	615	58580089	-	XOO0466	-	hypothetical protein
402	 63.33	0	478687..480483	+	598	58580090	zwf	XOO0467	-	glucose-6-phosphate 1-dehydrogenase
403	 63.53	0	481071..482282	+	403	58580091	-	XOO0468	-	putative ISXo8 transposase
404	 65.40	0	482382..484199	-	605	58580092	kefC	XOO0469	-	gluta