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Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3448 64.97 0 4112017..4112487 - 156 58583474 nusB XOO3851 - transcription antitermination protein NusB 3449 67.30 0 4112484..4112960 - 158 58583475 ribH XOO3852 - riboflavin synthase subunit beta 3450 66.49 0 4113262..4114401 - 379 58583476 ribA XOO3853 - GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3451 63.85 0 4114398..4115000 - 200 122879294 ribE XOO3854 - riboflavin synthase subunit alpha 3452 63.94 0 4115561..4116184 + 207 58583478 - XOO3855 - hypothetical protein 3453 66.04 0 4116240..4117349 - 369 58583479 ribD XOO3856 - riboflavin-specific deaminase; 5-amino-6-uracil reductase 3454 62.96 0 4117346..4117831 - 161 58583480 - XOO3857 - acetyltransferase 3455 61.71 0 4117828..4118352 - 174 122879295 - XOO3858 - transcriptional regulator NrdR 3456 64.31 0 4118352..4118861 - 169 58583482 - XOO3859 - hypothetical protein 3457 63.48 0 4118881..4120134 - 417 58583483 glyA XOO3860 - serine hydroxymethyltransferase 3458 62.68 0 4120320..4122902 - 860 58583484 - XOO3861 - TonB-dependent receptor, putative 3459 64.75 0 4123346..4123867 - 173 58583485 - XOO3862 - hypothetical protein 3460 61.85 0 4123827..4125755 + 642 58583486 yjjK XOO3863 - putative ABC transporter ATP-binding protein 3461 64.93 0 4125930..4126274 + 114 58583487 - XOO3864 - hypothetical protein 3462 61.62 0 4126271..4126627 - 118 58583488 sll7047 XOO3865 - hypothetical protein 3463 61.37 0 4127118..4127948 - 276 58583489 - XOO3866 - esterase 3464 63.47 0 4128650..4129807 - 385 58583490 - XOO3867 - alcohol dehydrogenase C 3465 65.58 0 4129824..4130099 - 91 58583491 - XOO3868 - hypothetical protein 3466 64.94 0 4131221..4132321 - 366 58583492 - XOO3869 - hypothetical protein 3467 64.42 0 4132334..4133179 + 281 58583493 - XOO3870 - two-component system regulatory protein 3468 67.00 0 4133176..4134675 + 499 58583494 - XOO3871 - two-component system sensor protein 3469 64.55 0 4134708..4135652 - 314 58583495 - XOO3872 - hypothetical protein 3470 61.02 0 4137150..4137893 - 247 58583496 gsh1 XOO3873 - glutamate-cysteine ligase precursor 3471 62.26 0 4138003..4139385 - 460 122879296 - XOO3874 - putative ISXo8 transposase 3472 66.39 0 4139977..4140699 + 240 122879297 - XOO3875 - two-component system sensor protein 3473 65.13 0 4140886..4142250 - 454 58583500 gsh1 XOO3877 - glutamate-cysteine ligase precursor 3474 68.46 +1 4142271..4143161 + 296 58583501 dr161 XOO3878 - nodulin 21-related protein 3475 59.20 -1 4143299..4143646 - 115 58583502 - XOO3879 - putative transposase 3476 58.28 -1 4143612..4144064 - 150 58583503 - XOO3880 - putative transposase 3477 66.15 0 4144108..4144884 - 258 58583504 yihA XOO3881 - GTPase EngB 3478 68.30 +1 4144876..4145673 + 265 58583505 cycA XOO3882 - cytochrome C4 3479 66.18 0 4146509..4147324 + 271 122879298 dsbA XOO3884 - thiol:disulfide interchange protein 3480 65.10 0 4147344..4148111 + 255 58583508 - XOO3885 - hypothetical protein 3481 61.82 0 4148695..4148859 + 54 58583510 betT XOO3887 - high-affinity choline transport 3482 62.45 0 4148856..4149401 - 181 58583511 - XOO3888 - IS1404 transposase 3483 58.89 -1 4149696..4149965 - 89 121632130 - YXOOp13 - IS1404 transposase 3484 58.16 -1 4150738..4151031 + 97 58583514 tnp XOO3891 - transposase 3485 62.06 0 4151831..4153177 - 448 58583515 - XOO3892 - ISxac1 transposase 3486 55.91 -2 4153288..4155081 + 597 58583516 metC XOO3893 - putative cystathionine gamma-synthase protein 3487 61.40 0 4155294..4156262 + 322 58583517 - XOO3894 - putative transposase 3488 61.11 0 4156997..4157266 + 89 58583518 tnp XOO3895 - transposase 3489 58.87 -1 4158644..4158874 - 76 58583521 - XOO3898 - putative transposase 3490 61.93 0 4159073..4159621 + 182 58583522 - XOO3899 - putative ISXo8 transposase 3491 63.99 0 4160649..4161881 + 410 122879299 cca XOO3900 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3492 61.40 0 4164241..4165209 - 322 58583528 - XOO3905 - putative transposase 3493 58.59 -1 4165901..4166692 - 263 58583530 fyuA XOO3907 - TonB-dependent receptor 3494 58.95 -1 4166679..4167041 - 120 58583531 fyuA XOO3908 - TonB-dependent receptor 3495 61.54 0 4167070..4168512 - 480 58583532 fyuA XOO3909 - TonB-dependent receptor 3496 63.23 0 4168851..4169867 + 338 58583533 - XOO3910 - transposase 3497 64.30 0 4171088..4173238 + 716 58583534 hmsH XOO3911 - HmsH 3498 62.75 0 4173147..4175138 + 663 58583535 hmsF XOO3912 - HmsF 3499 63.00 0 4175140..4176393 + 417 161898963 hmsR XOO3913 - N-glycosyltransferase PgaC 3500 65.18 0 4176390..4176995 + 201 58583537 - XOO3914 - hypothetical protein 3501 67.01 0 4177415..4178575 - 386 58583538 nagA XOO3915 - N-acetylglucosamine-6-phosphate deacetylase 3502 65.99 0 4178572..4179600 - 342 58583540 glmS XOO3917 - glucosamine-fructose-6-phosphate aminotransferase 3503 64.49 0 4179597..4180700 - 367 58583541 - XOO3918 - LacI family transcription regulator 3504 61.82 0 4180714..4181991 - 425 58583542 gluP XOO3919 - glucose-galactose transporter 3505 64.82 0 4182036..4182902 - 288 58583543 - XOO3920 - GntR family transcriptional regulator 3506 64.37 0 4183018..4184106 - 362 58583544 - XOO3921 - hypothetical protein 3507 64.99 0 4184318..4186579 - 753 58583545 - XOO3922 - N-acetylglucosaminidase 3508 66.25 0 4186730..4189627 - 965 58583546 lacZ XOO3923 - truncated beta-galactosidase 3509 61.09 0 4189778..4192468 - 896 122879300 iroN XOO3924 - TonB-dependent receptor 3510 62.33 0 4192750..4193718 - 322 58583548 - XOO3925 - transposase 3511 57.54 -1 4193909..4194193 + 94 58583549 - XOO3926 - IS1404 transposase 3512 63.43 0 4194197..4195432 - 411 58583551 - XOO3928 - transposase 3513 64.98 0 4196881..4198065 - 394 122879301 - XOO3931 - hypothetical protein 3514 68.02 +1 4198133..4198870 + 245 58583555 ptr1 XOO3932 - pteridine reductase 3515 65.31 0 4199039..4199554 - 171 58583556 folK XOO3933 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine 3516 63.94 0 4199646..4201148 - 500 58583557 - XOO3934 - histidine kinase-response regulator hybrid protein 3517 63.49 0 4201152..4201592 - 146 58583558 - XOO3935 - two-component system regulatory protein 3518 63.98 0 4201589..4203448 - 619 58583559 - XOO3936 - two-component system sensor protein 3519 60.75 0 4203686..4204057 - 123 58583560 - XOO3937 - hypothetical protein 3520 65.62 0 4204208..4205260 + 350 58583561 ydgJ XOO3938 - oxidoreductase 3521 64.12 0 4205600..4206541 - 313 58583562 gndA XOO3939 - 6-phosphogluconate dehydrogenase-like protein 3522 64.90 0 4206562..4207977 - 471 58583563 - XOO3940 - hypothetical protein 3523 62.44 0 4208071..4208520 - 149 58583564 - XOO3941 - hypothetical protein 3524 65.91 0 4208576..4209373 - 265 122879302 - XOO3942 - hypothetical protein 3525 68.10 +1 4209412..4209690 - 92 58583566 - XOO3943 - hypothetical protein 3526 67.96 +1 4211255..4211563 - 102 58583569 - XOO3946 - hypothetical protein 3527 63.59 0 4211586..4213046 - 486 58583570 pbeF XOO3947 - putative nicotinate phosphoribosyltransferase 3528 63.16 0 4213112..4214167 - 351 58583571 - XOO3948 - bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 3529 61.13 0 4214166..4215194 + 342 58583572 - XOO3949 - hypothetical protein 3530 63.05 0 4215486..4217669 - 727 58583573 prc XOO3950 - tail-specific protease 3531 61.16 0 4219259..4220839 - 526 122879303 xphIM XOO3951 - methyltransferase homolog M.XphI 3532 64.30 0 4221315..4222328 - 337 58583575 lipA XOO3952 - lipoyl synthase 3533 65.09 0 4222343..4223041 - 232 58583576 lipB XOO3953 - lipoyltransferase 3534 64.83 0 4223434..4224087 - 217 122879304 - XOO3955 - hypothetical protein 3535 64.43 0 4224373..4225578 - 401 58583579 dacC XOO3956 - penicillin-binding protein 6 3536 67.37 +1 4226079..4227494 - 471 58583580 rlpA XOO3957 - rare lipoprotein A 3537 65.44 0 4227491..4228630 - 379 58583581 mltB XOO3958 - membrane-bound lytic transglycosylase 3538 70.10 +1 4234117..4236273 - 718 58583587 - XOO3964 - hypothetical protein 3539 59.26 -1 4236249..4236788 - 179 122879305 - XOO3965 - hypothetical protein 3540 65.31 0 4238868..4240043 - 391 58583589 - XOO3966 - hypothetical protein 3541 64.70 0 4240612..4241730 - 372 58583590 mrdB XOO3967 - rod shape-determining protein 3542 67.30 0 4241727..4243787 - 686 58583591 mrdA XOO3968 - penicillin-binding protein 2 3543 65.64 0 4243791..4244276 - 161 58583592 mreD XOO3969 - rod shape-determining protein 3544 64.58 0 4245792..4246943 - 383 58583593 mreB XOO3970 - rod shape-determining protein 3545 63.67 0 4247114..4248046 + 310 122879306 - XOO3971 - sugar kinase 3546 57.68 -1 4249214..4249669 + 151 58583597 - XOO3974 - putative transposase 3547 58.70 -1 4249635..4250111 + 158 58583598 - XOO3975 - putative transposase 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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