IslandPathversion 1.0

IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 63.81 STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3369	 65.87	0	4011221..4011724	+	167	122879288	-	XOO3758	-	hypothetical protein
3370	 63.27	0	4011776..4011922	+	48	58583382	-	XOO3759	-	hypothetical protein
3371	 58.06	-1	4012231..4012602	+	123	58583383	-	XOO3760	-	putative transposase
3372	 58.91	-1	4012568..4013044	+	158	58583384	-	XOO3761	-	putative transposase
3373	 64.64	0	4013348..4014679	-	443	58583385	colS	XOO3762	-	two-component system sensor protein
3374	 66.35	0	4014766..4015389	-	207	58583386	colR	XOO3763	-	two-component system regulatory protein
3375	 64.87	0	4015572..4016240	-	222	58583387	tesA	XOO3764	-	acyl-CoA thioesterase I
3376	 69.67	+1	4016350..4016949	+	199	58583388	ftsE	XOO3765	-	ABC transporter ATP-binding protein
3377	 67.91	+1	4016946..4019429	+	827	58583389	-	XOO3766	-	oxidoreductase
3378	 63.89	0	4019581..4020660	+	359	58583390	tauD	XOO3767	-	taurine dioxygenase
3379	 60.75	0	4021428..4021748	+	106	58583392	-	XOO3769	-	ABC transporter substrate binding protein
3380	 65.74	0	4023361..4023468	+	35	58583396	nrtB	XOO3773	-	permease
3381	 57.91	-1	4023551..4023904	+	117	58583397	-	XOO3774	-	hypothetical protein
3382	 64.04	0	4024206..4024853	-	215	58583398	-	XOO3775	-	hypothetical protein
3383	 56.88	-1	4024888..4025490	-	200	122879289	-	XOO3776	-	hypothetical protein
3384	 61.11	0	4026717..4026914	-	65	58583403	phuR	XOO3780	-	outer membrane hemin receptor
3385	 60.57	0	4027339..4027584	-	81	58583404	-	XOO3781	-	hypothetical protein
3386	 66.30	0	4027959..4029047	-	362	58583405	-	XOO3782	-	voltage-gated potassium channel beta subunit
3387	 63.40	0	4031394..4032464	+	356	58583408	rbsK	XOO3785	-	ribokinase
3388	 62.23	0	4033055..4035238	+	727	58583409	-	XOO3786	-	hypothetical protein
3389	 67.27	0	4035348..4036346	+	332	58583410	-	XOO3787	-	hypothetical protein
3390	 64.58	0	4036374..4037093	+	239	58583411	-	XOO3788	-	methyltransferase
3391	 63.78	0	4038535..4039746	+	403	58583414	metK	XOO3791	-	S-adenosylmethionine synthetase
3392	 68.67	+1	4040091..4041689	-	532	58583415	appA	XOO3792	-	phosphoanhydride phosphohydrolase
3393	 61.92	0	4041679..4044435	-	918	58583416	cirA	XOO3793	-	TonB-dependent receptor
3394	 62.40	0	4045514..4046896	+	460	122879290	-	XOO3794	-	putative ISXo8 transposase
3395	 67.81	+1	4047411..4048109	-	232	58583418	-	XOO3795	-	TetR/AcrR family transcriptional regulator
3396	 67.59	+1	4048106..4050820	-	904	58583419	ppc	XOO3796	-	phosphoenolpyruvate carboxylase
3397	 68.15	+1	4051014..4051685	-	223	58583420	-	XOO3797	-	hypothetical protein
3398	 62.72	0	4051873..4053315	+	480	122879291	sahH	XOO3798	-	S-adenosyl-L-homocysteine hydrolase
3399	 66.67	0	4053547..4054455	-	302	58583422	-	XOO3799	-	methyltransferase
3400	 65.49	0	4054364..4055296	-	310	58583423	-	XOO3800	-	sulfotransferase
3401	 60.33	0	4055787..4056623	-	278	58583424	-	XOO3801	-	hypothetical protein
3402	 64.42	0	4056624..4057202	-	192	58583425	-	XOO3802	-	hypothetical protein
3403	 63.92	0	4057410..4057955	-	181	58583426	-	XOO3803	-	hypothetical protein
3404	 64.53	0	4059291..4060226	-	311	58583427	dgd	XOO3804	-	D-galactose 1-dehydrogenase
3405	 64.89	0	4060517..4060741	+	74	58583428	-	XOO3805	-	hypothetical protein
3406	 64.16	0	4061087..4061725	-	212	58583429	xcp	XOO3806	-	protease
3407	 66.97	0	4061914..4062891	-	325	58583430	-	XOO3807	-	quinone reductase
3408	 64.52	0	4063382..4064218	+	278	122879292	-	XOO3808	-	hypothetical protein
3409	 68.13	+1	4064288..4064764	+	158	58583432	-	XOO3809	-	hypothetical protein
3410	 64.25	0	4064804..4065631	+	275	58583433	metF	XOO3810	-	5,10-methylenetetrahydrofolate reductase
3411	 67.14	0	4065632..4065841	+	69	58583434	-	XOO3811	-	hypothetical protein
3412	 65.99	0	4066002..4066589	+	195	58583435	-	XOO3812	-	hypothetical protein
3413	 55.88	-2	4067803..4067904	-	33	58583438	-	XOO3815	-	hypothetical protein
3414	 66.24	0	4067892..4068839	-	315	58583439	-	XOO3816	-	hypothetical protein
3415	 61.55	0	4068980..4069585	-	201	58583440	-	XOO3817	-	hypothetical protein
3416	 62.58	0	4069813..4072551	-	912	161898965	secA	XOO3818	-	preprotein translocase subunit SecA
3417	 65.24	0	4072708..4073685	-	325	58583442	-	XOO3819	-	peptidase
3418	 61.74	0	4073650..4074096	+	148	58583443	-	XOO3820	-	hypothetical protein
3419	 61.07	0	4074283..4075194	-	303	161898964	lpxC	XOO3821	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
3420	 65.94	0	4075431..4076675	-	414	122879293	ftsZ	XOO3822	-	cell division protein FtsZ
3421	 64.56	0	4076978..4078213	-	411	58583446	ftsA	XOO3823	-	cell division protein
3422	 64.99	0	4079156..4080112	-	318	58583447	ddl	XOO3824	-	D-alanine--D-alanine ligase
3423	 66.13	0	4080109..4081611	-	500	58583448	murC	XOO3825	-	UDP-N-acetylmuramate--L-alanine ligase
3424	 66.37	0	4081539..4082864	-	441	58583449	murG	XOO3826	-	N-acetylglucosaminyl transferase
3425	 64.82	0	4082861..4084321	-	486	58583450	ftsW	XOO3827	-	cell division protein
3426	 61.79	0	4084234..4085319	-	361	58583451	mraY	XOO3828	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
3427	 66.60	0	4085309..4086820	-	503	58583452	murF	XOO3829	-	UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase
3428	 66.47	0	4086817..4088304	-	495	58583453	murE	XOO3830	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
3429	 65.39	0	4088301..4090178	-	625	58583454	ftsI	XOO3831	-	penicillin-binding protein 3
3430	 60.98	0	4090309..4090572	-	87	58583455	ftsL	XOO3832	-	cell division protein
3431	 66.67	0	4090569..4091630	-	353	58583456	mraW	XOO3833	-	S-adenosyl-methyltransferase MraW
3432	 59.87	-1	4091627..4092082	-	151	58583457	-	XOO3834	-	cell division protein MraZ
3433	 69.14	+1	4092397..4093164	+	255	58583458	-	XOO3835	-	hypothetical protein
3434	 61.65	0	4093382..4093780	+	132	58583459	-	XOO3836	-	hypothetical protein
3435	 69.34	+1	4094705..4095526	-	273	58583460	-	XOO3837	-	hypothetical protein
3436	 70.71	+1	4095608..4097338	+	576	58583461	-	XOO3838	-	hypothetical protein
3437	 69.36	+1	4097304..4097711	+	135	58583462	-	XOO3839	-	hypothetical protein
3438	 67.53	+1	4097705..4098280	+	191	58583463	-	XOO3840	-	hypothetical protein
3439	 66.81	0	4098235..4099662	+	475	58583464	dld	XOO3841	-	D-lactate dehydrogenase
3440	 65.64	0	4099676..4100458	-	260	58583465	kdpE	XOO3842	-	two-component system regulatory protein
3441	 67.34	+1	4100382..4103042	-	886	58583466	kdpD	XOO3843	-	two-component system sensor protein
3442	 67.64	+1	4103094..4103711	-	205	58583467	kdpC	XOO3844	-	potassium-transporting ATPase subunit C
3443	 64.67	0	4103764..4105812	-	682	58583468	kdpB	XOO3845	-	potassium-transporting ATPase subunit B
3444	 63.88	0	4105825..4107618	-	597	58583469	kdpA	XOO3846	-	potassium-transporting ATPase subunit A
3445	 62.30	0	4108176..4108748	-	190	58583470	-	XOO3847	-	hypothetical protein
3446	 67.58	+1	4109867..4110523	-	218	58583472	-	XOO3849	-	hypothetical protein
3447	 68.12	+1	4110822..4111919	-	365	58583473	thiL	XOO3850	-	thiamine monophosphate kinase
3448	 64.97	0	4112017..4112487	-	156	58583474	nusB	XOO3851	-	transcription antitermination protein NusB
3449	 67.30	0	4112484..4112960	-	158	58583475	ribH	XOO3852	-	riboflavin synthase subunit beta
3450	 66.49	0	4113262..4114401	-	379	58583476	ribA	XOO3853	-	GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase
3451	 63.85	0	4114398..4115000	-	2