IslandPathversion 1.0

IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 63.81 STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
3338	 61.96	0	3981219..3981941	+	240	58583348	-	XOO3725	-	hypothetical protein
3339	 64.38	0	3982111..3982548	+	145	58583349	-	XOO3726	-	hypothetical protein
3340	 66.88	0	3982676..3983149	+	157	58583350	-	XOO3727	-	MarR family transcriptional regulator
3341	 61.96	0	3983195..3984022	+	275	58583351	fadB	XOO3728	-	p-hydroxycinnamoyl CoA hydratase/lyase
3342	 65.51	0	3984106..3985575	+	489	58583352	badH	XOO3729	-	aldehyde dehydrogenase
3343	 63.41	0	3985601..3987256	+	551	58583353	-	XOO3730	-	acyl-CoA synthetase
3344	 63.40	0	3987441..3988481	-	346	58583354	pcaQ	XOO3731	-	transcriptional regulator
3345	 64.33	0	3988879..3989775	-	298	58583357	pcaH	XOO3734	-	protocatechuate 4,5-dioxygenase subunit beta
3346	 65.71	0	3990118..3990327	+	69	58583358	vanR	XOO3735	-	GntR family transcriptional regulator
3347	 61.47	0	3990435..3990896	-	153	58583359	-	XOO3736	-	putative transposase
3348	 63.32	0	3990859..3991875	-	338	58583360	-	XOO3737	-	transposase
3349	 63.28	0	3991903..3992433	-	176	58583361	-	XOO3738	-	putative transposase
3350	 66.54	0	3992461..3993273	-	270	58583362	-	XOO3739	-	hydrolase
3351	 68.76	+1	3993401..3994597	-	398	58583363	visC	XOO3740	-	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
3352	 69.38	+1	3994579..3995793	-	404	58583364	ubiH	XOO3741	-	2-octaprenyl-6-methoxyphenyl hydroxylase
3353	 68.74	+1	3996086..3996664	+	192	122879287	-	XOO3742	-	hypothetical protein
3354	 68.10	+1	3996668..3997225	+	185	58583366	-	XOO3743	-	hypothetical protein
3355	 69.00	+1	3997230..3998171	+	313	58583367	-	XOO3744	-	acetoin utilization family protein
3356	 61.70	0	3998242..4000740	+	832	58583368	ostA	XOO3745	-	organic solvent tolerance protein
3357	 64.44	0	4000737..4002128	+	463	58583369	surA	XOO3746	-	peptidyl-prolyl cis-trans isomerase
3358	 68.00	+1	4002149..4003120	+	323	58583370	pdxA	XOO3747	-	4-hydroxythreonine-4-phosphate dehydrogenase
3359	 64.64	0	4003377..4004165	+	262	58583371	ksgA	XOO3748	-	dimethyladenosine transferase
3360	 66.15	0	4004202..4004585	+	127	58583372	apaG	XOO3749	-	ApaG
3361	 66.04	0	4004614..4005570	+	318	58583373	apaH	XOO3750	-	diadenosine tetraphosphatase
3362	 63.43	0	4005624..4006118	-	164	58583374	folA	XOO3751	-	dihydrofolate reductase type III
3363	 62.01	0	4006469..4007263	-	264	58583375	thyA	XOO3752	-	thymidylate synthase
3364	 63.75	0	4007260..4008150	-	296	58583376	lgt	XOO3753	-	prolipoprotein diacylglyceryl transferase
3365	 66.26	0	4008205..4008696	-	163	58583377	-	XOO3754	-	hypothetical protein
3366	 68.67	+1	4008696..4009592	-	298	58583378	-	XOO3755	-	glycine rich protein
3367	 60.70	0	4009924..4010694	-	256	58583379	-	XOO3756	-	hypothetical protein
3368	 65.31	0	4010658..4011026	-	122	58583380	dgkA	XOO3757	-	diacylglycerol kinase
3369	 65.87	0	4011221..4011724	+	167	122879288	-	XOO3758	-	hypothetical protein
3370	 63.27	0	4011776..4011922	+	48	58583382	-	XOO3759	-	hypothetical protein
3371	 58.06	-1	4012231..4012602	+	123	58583383	-	XOO3760	-	putative transposase
3372	 58.91	-1	4012568..4013044	+	158	58583384	-	XOO3761	-	putative transposase
3373	 64.64	0	4013348..4014679	-	443	58583385	colS	XOO3762	-	two-component system sensor protein
3374	 66.35	0	4014766..4015389	-	207	58583386	colR	XOO3763	-	two-component system regulatory protein
3375	 64.87	0	4015572..4016240	-	222	58583387	tesA	XOO3764	-	acyl-CoA thioesterase I
3376	 69.67	+1	4016350..4016949	+	199	58583388	ftsE	XOO3765	-	ABC transporter ATP-binding protein
3377	 67.91	+1	4016946..4019429	+	827	58583389	-	XOO3766	-	oxidoreductase
3378	 63.89	0	4019581..4020660	+	359	58583390	tauD	XOO3767	-	taurine dioxygenase
3379	 60.75	0	4021428..4021748	+	106	58583392	-	XOO3769	-	ABC transporter substrate binding protein
3380	 65.74	0	4023361..4023468	+	35	58583396	nrtB	XOO3773	-	permease
3381	 57.91	-1	4023551..4023904	+	117	58583397	-	XOO3774	-	hypothetical protein
3382	 64.04	0	4024206..4024853	-	215	58583398	-	XOO3775	-	hypothetical protein
3383	 56.88	-1	4024888..4025490	-	200	122879289	-	XOO3776	-	hypothetical protein
3384	 61.11	0	4026717..4026914	-	65	58583403	phuR	XOO3780	-	outer membrane hemin receptor
3385	 60.57	0	4027339..4027584	-	81	58583404	-	XOO3781	-	hypothetical protein
3386	 66.30	0	4027959..4029047	-	362	58583405	-	XOO3782	-	voltage-gated potassium channel beta subunit
3387	 63.40	0	4031394..4032464	+	356	58583408	rbsK	XOO3785	-	ribokinase
3388	 62.23	0	4033055..4035238	+	727	58583409	-	XOO3786	-	hypothetical protein
3389	 67.27	0	4035348..4036346	+	332	58583410	-	XOO3787	-	hypothetical protein
3390	 64.58	0	4036374..4037093	+	239	58583411	-	XOO3788	-	methyltransferase
3391	 63.78	0	4038535..4039746	+	403	58583414	metK	XOO3791	-	S-adenosylmethionine synthetase
3392	 68.67	+1	4040091..4041689	-	532	58583415	appA	XOO3792	-	phosphoanhydride phosphohydrolase
3393	 61.92	0	4041679..4044435	-	918	58583416	cirA	XOO3793	-	TonB-dependent receptor
3394	 62.40	0	4045514..4046896	+	460	122879290	-	XOO3794	-	putative ISXo8 transposase
3395	 67.81	+1	4047411..4048109	-	232	58583418	-	XOO3795	-	TetR/AcrR family transcriptional regulator
3396	 67.59	+1	4048106..4050820	-	904	58583419	ppc	XOO3796	-	phosphoenolpyruvate carboxylase
3397	 68.15	+1	4051014..4051685	-	223	58583420	-	XOO3797	-	hypothetical protein
3398	 62.72	0	4051873..4053315	+	480	122879291	sahH	XOO3798	-	S-adenosyl-L-homocysteine hydrolase
3399	 66.67	0	4053547..4054455	-	302	58583422	-	XOO3799	-	methyltransferase
3400	 65.49	0	4054364..4055296	-	310	58583423	-	XOO3800	-	sulfotransferase
3401	 60.33	0	4055787..4056623	-	278	58583424	-	XOO3801	-	hypothetical protein
3402	 64.42	0	4056624..4057202	-	192	58583425	-	XOO3802	-	hypothetical protein
3403	 63.92	0	4057410..4057955	-	181	58583426	-	XOO3803	-	hypothetical protein
3404	 64.53	0	4059291..4060226	-	311	58583427	dgd	XOO3804	-	D-galactose 1-dehydrogenase
3405	 64.89	0	4060517..4060741	+	74	58583428	-	XOO3805	-	hypothetical protein
3406	 64.16	0	4061087..4061725	-	212	58583429	xcp	XOO3806	-	protease
3407	 66.97	0	4061914..4062891	-	325	58583430	-	XOO3807	-	quinone reductase
3408	 64.52	0	4063382..4064218	+	278	122879292	-	XOO3808	-	hypothetical protein
3409	 68.13	+1	4064288..4064764	+	158	58583432	-	XOO3809	-	hypothetical protein
3410	 64.25	0	4064804..4065631	+	275	58583433	metF	XOO3810	-	5,10-methylenetetrahydrofolate reductase
3411	 67.14	0	4065632..4065841	+	69	58583434	-	XOO3811	-	hypothetical protein
3412	 65.99	0	4066002..4066589	+	195	58583435	-	XOO3812	-	hypothetical protein
3413	 55.88	-2	4067803..4067904	-	33	58583438	-	XOO3815	-	hypothetical protein
3414	 66.24	0	4067892..4068839	-	315	58583439	-	XOO3816	-	hypothetical protein
3415	 61.55	0	4068980..4069585	-	201	58583440	-	XOO3817	-	hypothetical protein
3416	 62.58	0	4069813..4072551	-	912	161898965	secA	XOO3818	-	preprotein translocase subunit SecA
3417	 65.24	0	4072708..4073685	-	325	58583442	-	XOO3819	-	peptidase
3418	 61.74	0	4073650..4074096	+	148	58583443	-	XOO3820	-	hypothetical protein
3419	 61.07	0	4074283..4075194	-	303	161898964	lpxC	XOO3821	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
3420	 65.94	0	4075431..4076675	-	414