IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2943	 65.67	0	3514734..3516749	+	671	58582904	-	XOO3281	-	metallopeptidase
2944	 60.92	0	3517020..3517802	-	260	58582905	-	XOO3282	-	integral membrane protein
2945	 68.65	+1	3517759..3518313	-	184	58582906	-	XOO3283	-	methylated-DNA-protein-cysteine S-methyltransferase related protein
2946	 65.11	0	3518604..3519566	-	320	58582907	-	XOO3284	-	IS1595 transposase
2947	 65.08	0	3520334..3520648	-	104	58582910	-	XOO3287	-	reductase
2948	 65.74	0	3520851..3522149	-	432	58582911	dadA	XOO3288	-	D-amino acid dehydrogenase subunit
2949	 64.82	0	3522109..3523356	-	415	58582912	yxaH	XOO3289	-	transport protein
2950	 61.88	0	3523581..3524060	-	159	58582913	slyD	XOO3290	-	peptidyl-prolyl cis-trans isomerase
2951	 67.32	+1	3524096..3524707	+	203	58582914	-	XOO3291	-	lipoprotein
2952	 66.13	0	3524817..3525566	+	249	58582915	-	XOO3292	-	hypothetical protein
2953	 64.43	0	3525774..3526265	-	163	58582916	-	XOO3293	-	acyl-CoA thioester hydrolase
2954	 63.97	0	3526512..3527030	-	172	58582917	-	XOO3294	-	hypothetical protein
2955	 62.77	0	3527379..3528788	-	469	58582918	gltT	XOO3295	-	glutamate symport protein
2956	 68.25	+1	3528843..3530549	+	568	58582919	phoA	XOO3296	-	alkaline phosphatase
2957	 67.89	+1	3530583..3531887	+	434	58582920	mesJ	XOO3297	-	cell cycle protein
2958	 62.84	0	3531919..3532179	+	86	161898970	xseB	XOO3298	-	exodeoxyribonuclease VII small subunit
2959	 66.67	0	3532181..3533056	+	291	58582922	ispA	XOO3299	-	geranyltranstransferase; farnesyl-diphosphate synthase
2960	 63.73	0	3533614..3534837	+	407	58582923	-	XOO3300	-	extracellular protease
2961	 58.97	-1	3534891..3535397	-	168	58582925	-	XOO3302	-	hypothetical protein
2962	 66.60	0	3535885..3537297	-	470	58582926	pmbA	XOO3303	-	hypothetical protein
2963	 66.15	0	3537398..3537979	+	193	58582927	-	XOO3304	-	hypothetical protein
2964	 67.84	+1	3538236..3539681	-	481	58582928	tldD	XOO3305	-	hypothetical protein
2965	 63.19	0	3539732..3540163	+	143	58582929	-	XOO3306	-	hypothetical protein
2966	 60.54	0	3540151..3541032	+	293	58582930	-	XOO3307	-	putative ISXo8 transposase
2967	 58.41	-1	3541002..3541328	+	108	58582931	-	XOO3308	-	putative transposase
2968	 58.70	-1	3541325..3541801	+	158	58582932	-	XOO3309	-	putative transposase
2969	 61.93	0	3541838..3542386	+	182	58582933	-	XOO3310	-	putative ISXo8 transposase
2970	 69.08	+1	3543015..3546779	-	1254	58582936	-	XOO3313	-	hypothetical protein
2971	 64.47	0	3546927..3548426	-	499	122879251	rng	XOO3315	-	ribonuclease G
2972	 64.73	0	3548426..3549148	-	240	58582939	maf	XOO3316	-	Maf-like protein
2973	 65.71	0	3549137..3549871	+	244	58582940	bp26	XOO3317	-	outer membrane protein
2974	 58.06	-1	3550083..3550454	+	123	58582941	-	XOO3318	-	putative transposase
2975	 58.91	-1	3550420..3550896	+	158	58582942	-	XOO3319	-	putative transposase
2976	 60.65	0	3551120..3554308	+	1062	58582943	oar	XOO3320	-	Oar protein
2977	 63.68	0	3554463..3555434	+	323	58582944	-	XOO3321	-	TonB-like protein
2978	 65.83	0	3555724..3556200	-	158	58582945	-	XOO3322	-	SPOUT methyltransferase superfamily protein
2979	 62.86	0	3556749..3556958	+	69	58582946	-	XOO3323	-	hypothetical protein
2980	 61.47	0	3557284..3558399	-	371	58582947	-	XOO3324	-	DnaJ domain-containing protein
2981	 64.03	0	3558411..3558827	-	138	58582948	-	XOO3325	-	hypothetical protein
2982	 68.32	+1	3559780..3560808	-	342	58582950	holA	XOO3327	-	DNA polymerase III subunit delta
2983	 66.51	0	3560831..3561472	-	213	58582951	rlpB	XOO3328	-	lipoprotein
2984	 65.23	0	3561980..3564622	-	880	58582952	leuS	XOO3329	-	leucyl-tRNA synthetase
2985	 71.24	+2	3564695..3565306	-	203	58582954	-	XOO3331	-	hypothetical protein
2986	 66.87	0	3565388..3566368	+	326	58582955	trx	XOO3332	-	thioredoxin
2987	 61.93	0	3566378..3567073	+	231	58582956	-	XOO3333	-	hypothetical protein
2988	 65.19	0	3567373..3567507	-	44	58582957	-	XOO3334	-	transposase
2989	 54.81	-2	3568437..3568883	+	148	58582960	-	XOO3337	-	transposase
2990	 61.54	0	3570604..3570837	+	77	122879252	-	XOO3339	-	hypothetical protein
2991	 65.44	0	3570871..3571845	+	324	58582963	-	XOO3340	-	peptidyl-prolyl cis-trans isomerase
2992	 69.27	+1	3571853..3572044	-	63	58582965	-	XOO3342	-	hypothetical protein
2993	 62.55	0	3572135..3573517	-	460	58582966	-	XOO3343	-	putative ISXo8 transposase
2994	 62.91	0	3573542..3574765	-	407	58582967	-	XOO3344	-	ISxac1 transposase
2995	 50.76	-2	3574902..3575429	+	175	58582968	-	XOO3345	-	hypothetical protein
2996	 63.11	0	3575426..3576382	-	318	58582969	-	XOO3346	-	transposase
2997	 54.81	-2	3576609..3577055	+	148	58582970	-	XOO3347	-	transposase
2998	 60.28	-1	3577656..3579833	+	725	58582972	glgX	XOO3349	-	glycogen debranching enzyme
2999	 60.20	-1	3580384..3580893	-	169	58582973	-	XOO3350	-	putative transposase
3000	 62.96	0	3580868..3581353	-	161	58582974	-	XOO3351	-	putative transposase
3001	 61.03	0	3581516..3582508	-	330	58582975	-	XOO3352	-	putative transposase
3002	 62.75	0	3582586..3582942	+	118	58582976	-	XOO3353	-	transposase
3003	 63.37	0	3582978..3583280	+	100	58582977	-	XOO3354	-	transposase
3004	 60.36	0	3583658..3583990	+	110	58582980	tnpA	XOO3357	-	transposase
3005	 57.83	-1	3584909..3585451	+	180	58582983	-	XOO3360	-	IS30 family transposase
3006	 56.37	-2	3585448..3585981	+	177	58582984	-	XOO3361	-	putative transposase
3007	 58.07	-1	3585947..3586423	+	158	58582985	-	XOO3362	-	putative transposase
3008	 60.15	-1	3586456..3586854	-	132	58582986	xrvA	XOO3363	-	virulence regulator
3009	 62.69	0	3586939..3587391	-	150	58582987	-	XOO3364	-	hypothetical protein
3010	 61.16	0	3587700..3588425	+	241	58582988	-	XOO3365	-	IS1478 transposase
3011	 68.29	+1	3589566..3590057	+	163	58582991	-	XOO3368	-	hypothetical protein
3012	 62.50	0	3590260..3590427	+	55	121632112	-	XOO4876	-	putative transposase
3013	 62.27	0	3590471..3591220	+	249	58582992	-	XOO3369	-	putative transposase
3014	 66.94	0	3591802..3593619	-	605	58582993	estA	XOO3370	-	lipase; esterase
3015	 62.69	0	3593777..3593977	+	66	58582994	-	XOO3371	-	sulfur carrier protein ThiS
3016	 64.27	0	3594348..3595307	+	319	58582995	thiG	XOO3372	-	thiazole synthase
3017	 65.35	0	3595609..3596367	+	252	58582996	trmB	XOO3373	-	tRNA (guanine-N(7))-methyltransferase
3018	 63.07	0	3596443..3598305	+	620	58582997	sac1	XOO3374	-	sulfur deprivation response regulator
3019	 63.43	0	3598363..3598887	-	174	58582998	-	XOO3375	-	hypothetical protein
3020	 62.32	0	3598964..3599239	+	91	58582999	-	XOO3376	-	hypothetical protein
3021	 64.12	0	3599294..3600079	+	261	58583000	-	XOO3377	-	IS1478 transposase
3022	 62.46	0	3600143..3600760	+	205	58583001	-	XOO3378	-	IS1478 transposase
3023	 57.83	-1	3601583..3602125	+	180	58583002	-	XOO3379	-	IS30 family transposase
3024	 64.99	0	3602294..3603007	+	237	122879253	-	XOO3380	-	fumarylacetoacetate hydrolase
3025	 58.39	-1	3603056..3603490	+	144	58583004	mscL	XOO3381	-	large-conductance mechanosensitive channel
3026	 55.48	-2	3603947..3604411	-	154	58583006	-	X