version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2882 62.13 0 3451814..3453928 - 704 58582837 pnp XOO3214 - polynucleotide phosphorylase/polyadenylase 2883 57.09 -1 3454094..3454354 - 86 161898974 rpsO XOO3215 - 30S ribosomal protein S15 2884 66.02 0 3454511..3455437 - 308 58582839 truB XOO3216 - tRNA pseudouridine synthase B 2885 65.14 0 3455517..3455909 - 130 58582840 rbfA XOO3217 - ribosome-binding factor A 2886 64.82 0 3456053..3458815 - 920 58582841 infB XOO3218 - translation initiation factor IF-2 2887 63.89 0 3458869..3460380 - 503 58582842 nusA XOO3219 - transcription elongation factor NusA 2888 61.76 0 3460385..3460975 - 196 161898973 - XOO3221 - hypothetical protein 2889 62.91 0 3461450..3462913 - 487 58582845 nuoN XOO3222 - NADH dehydrogenase subunit N 2890 60.94 0 3462947..3464449 - 500 58582846 nuoM XOO3223 - NADH dehydrogenase subunit M 2891 60.65 0 3464470..3466629 - 719 58582847 nuoL XOO3224 - NADH dehydrogenase subunit L 2892 58.17 -1 3466637..3466942 - 101 58582848 nuoK XOO3225 - NADH dehydrogenase subunit K 2893 62.57 0 3466939..3467622 - 227 58582849 nuoJ XOO3226 - NADH dehydrogenase subunit J 2894 59.15 -1 3467606..3468097 - 163 58582850 nuoI XOO3227 - NADH dehydrogenase subunit I 2895 59.71 -1 3468098..3469189 - 363 161898972 nuoH XOO3228 - NADH dehydrogenase subunit H 2896 65.46 0 3469186..3471420 - 744 161898971 nuoG XOO3229 - NADH dehydrogenase subunit G 2897 62.70 0 3471417..3472751 - 444 58582853 nuoF XOO3230 - NADH-ubiquinone oxidoreductase NQO1 subunit 2898 61.74 0 3472755..3473282 - 175 58582855 nuoE XOO3232 - NADH dehydrogenase subunit E 2899 60.09 -1 3473279..3474586 - 435 58582856 nuoD XOO3233 - NADH dehydrogenase subunit D 2900 64.41 0 3474583..3475335 - 250 58582857 nuoC XOO3234 - NADH dehydrogenase subunit C 2901 63.37 0 3475372..3475947 - 191 58582858 nuoB XOO3235 - NADH dehydrogenase subunit B 2902 57.95 -1 3475917..3476375 - 152 58582859 nuoA XOO3236 - NADH dehydrogenase subunit A 2903 66.67 0 3476510..3476971 - 153 58582860 secG XOO3237 - preprotein translocase subunit SecG 2904 65.04 0 3477005..3477805 - 266 58582861 tpiA XOO3238 - triosephosphate isomerase 2905 65.75 0 3477804..3478673 + 289 58582862 - XOO3239 - dehydrogenase 2906 60.17 -1 3479023..3479622 - 199 58582863 glbN XOO3240 - cyanoglobin 2907 57.14 -1 3479451..3479597 - 48 58582864 - XOO3241 - hypothetical protein 2908 54.81 -2 3479960..3480406 - 148 58582866 - XOO3243 - transposase 2909 57.61 -1 3480945..3481187 + 80 58582868 - XOO3245 - hypothetical protein 2910 65.02 0 3481403..3483769 - 788 58582869 - XOO3246 - phosphodiesterase 2911 65.79 0 3483766..3484446 - 226 58582870 - XOO3247 - hypothetical protein 2912 62.62 0 3484650..3485588 - 312 122879247 - XOO3248 - oxidoreductase 2913 65.63 0 3485711..3487060 - 449 58582872 mrsA XOO3249 - phosphohexose mutase 2914 64.75 0 3487057..3487944 - 295 58582873 accD XOO3250 - acetyl-CoA carboxylase subunit beta 2915 68.74 +1 3488262..3489128 - 288 58582874 trpA XOO3251 - tryptophan synthase subunit alpha 2916 64.78 0 3489515..3490732 - 405 122879248 trpB XOO3252 - tryptophan synthase subunit beta 2917 66.86 0 3490790..3491806 + 338 58582876 trpI XOO3253 - transcriptional regulator 2918 63.68 0 3492177..3492845 - 222 58582877 trpF XOO3254 - N-(5'-phosphoribosyl)anthranilate isomerase 2919 66.15 0 3492842..3493615 - 257 58582878 truA XOO3255 - tRNA pseudouridine synthase A 2920 67.82 +1 3493785..3493958 - 57 58582879 - XOO3256 - hypothetical protein 2921 60.90 0 3494037..3494192 - 51 58582880 - XOO3257 - hypothetical protein 2922 69.34 +1 3494189..3496174 - 661 58582881 - XOO3258 - FimV 2923 64.42 0 3496822..3497847 - 341 58582882 asd XOO3259 - aspartate-semialdehyde dehydrogenase 2924 68.09 +1 3497932..3499059 - 375 58582883 - XOO3260 - 2-hydroxyacid dehydrogenase 2925 66.30 0 3498998..3500101 - 367 58582884 aroC XOO3261 - chorismate synthase 2926 65.05 0 3500112..3501038 - 308 58582885 yfcB XOO3262 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2927 65.59 0 3501119..3501769 + 216 58582886 - XOO3263 - hypothetical protein 2928 66.67 0 3502839..3502952 + 37 58582888 dpsD XOO3265 - phosphatidylserine decarboxylase 2929 66.06 0 3503165..3504805 - 546 58582889 dniR XOO3266 - membrane-bound lytic murein transglycosylase D precursor 2930 67.54 +1 3504935..3505390 + 151 58582890 - XOO3267 - hypothetical protein 2931 66.25 0 3505459..3505938 - 159 58582891 - XOO3268 - hypothetical protein 2932 62.89 0 3506171..3507388 - 405 122879249 - XOO3269 - integral membrane protein 2933 65.95 0 3507349..3507627 - 92 58582893 - XOO3270 - integral membrane protein 2934 66.31 0 3507687..3508253 + 188 58582894 greB XOO3271 - transcription elongation factor GreB 2935 62.46 0 3508377..3509777 - 466 58582895 - XOO3272 - hypothetical protein 2936 66.67 0 3510040..3510342 + 100 58582897 - XOO3274 - carboxymethylenebutenolidase 2937 66.37 0 3510333..3510668 + 111 58582898 - XOO3275 - hypothetical protein 2938 61.31 0 3510696..3510863 + 55 58582899 - XOO3276 - hypothetical protein 2939 65.05 0 3511613..3511798 + 61 58582900 - XOO3277 - hypothetical protein 2940 62.28 0 3511833..3512402 - 189 58582901 dcd XOO3278 - deoxycytidine triphosphate deaminase 2941 66.20 0 3512495..3513346 - 283 122879250 - XOO3279 - hypothetical protein 2942 62.19 0 3513814..3514572 - 252 58582903 - XOO3280 - transposase 2943 65.67 0 3514734..3516749 + 671 58582904 - XOO3281 - metallopeptidase 2944 60.92 0 3517020..3517802 - 260 58582905 - XOO3282 - integral membrane protein 2945 68.65 +1 3517759..3518313 - 184 58582906 - XOO3283 - methylated-DNA-protein-cysteine S-methyltransferase related protein 2946 65.11 0 3518604..3519566 - 320 58582907 - XOO3284 - IS1595 transposase 2947 65.08 0 3520334..3520648 - 104 58582910 - XOO3287 - reductase 2948 65.74 0 3520851..3522149 - 432 58582911 dadA XOO3288 - D-amino acid dehydrogenase subunit 2949 64.82 0 3522109..3523356 - 415 58582912 yxaH XOO3289 - transport protein 2950 61.88 0 3523581..3524060 - 159 58582913 slyD XOO3290 - peptidyl-prolyl cis-trans isomerase 2951 67.32 +1 3524096..3524707 + 203 58582914 - XOO3291 - lipoprotein 2952 66.13 0 3524817..3525566 + 249 58582915 - XOO3292 - hypothetical protein 2953 64.43 0 3525774..3526265 - 163 58582916 - XOO3293 - acyl-CoA thioester hydrolase 2954 63.97 0 3526512..3527030 - 172 58582917 - XOO3294 - hypothetical protein 2955 62.77 0 3527379..3528788 - 469 58582918 gltT XOO3295 - glutamate symport protein 2956 68.25 +1 3528843..3530549 + 568 58582919 phoA XOO3296 - alkaline phosphatase 2957 67.89 +1 3530583..3531887 + 434 58582920 mesJ XOO3297 - cell cycle protein 2958 62.84 0 3531919..3532179 + 86 161898970 xseB XOO3298 - exodeoxyribonuclease VII small subunit 2959 66.67 0 3532181..3533056 + 291 58582922 ispA XOO3299 - geranyltranstransferase; farnesyl-diphosphate synthase 2960 63.73 0 3533614..3534837 + 407 58582923 - XOO3300 - extracellular protease 2961 58.97 -1 3534891..3535397 - 168 58582925 - XOO3302 - hypothetical protein 2962 66.60 0 3535885..3537297 - 470 58582926 pmbA XOO3303 - hypothetical protein 2963 66.15 0 3537398..3537979 + 193 58582927 - XOO3304 - hypothetical protein 2964 67.84 +1 3538236..3539681 - 481 58582928 tldD XOO3305 - hypothetical protein 2965 63.19 0 3539732..3540163 + 143 58582929 - XOO3306 - hypothetical protein 2966 60.54 0 3540151..3541032 + 293 58582930 - XOO3307 - putative ISXo8 transposase 2967 58.41 -1 3541002..3541328 + 108 58582931 - XOO3308 - putative transposase 2968 58.70 -1 3541325..3541801 + 158 58582932 - XOO3309 - putative transposase 2969 61.93 0 3541838..3542386 + 182 58582933 - XOO3310 - putative ISXo8 transposase 2970 69.08 +1 3543015..3546779 - 1254 58582936 - XOO3313 - hypothetical protein 2971 64.47 0 3546927..3548426 - 499 122879251 rng XOO3315 - ribonuclease G 2972 64.73 0 3548426..3549148 - 240 58582939 maf XOO3316 - Maf-like protein 2973 65.71 0 3549137..3549871 + 244 58582940 bp26 XOO3317 - outer membrane protein 2974 58.06 -1 3550083..3550454 + 123 58582941 - XOO3318 - putative transposase 2975 58.91 -1 3550420..3550896 + 158 58582942 - XOO3319 - putative transposase 2976 60.65 0 3551120..3554308 + 1062 58582943 oar XOO3320 - Oar protein 2977 63.68 0 3554463..3555434 + 323 58582944 - XOO3321 - TonB-like protein 2978 65.83 0 3555724..3556200 - 158 58582945 - XOO3322 - SPOUT methyltransferase superfamily protein 2979 62.86 0 3556749..3556958 + 69 58582946 - XOO3323 - hypothetical protein 2980 61.47 0 3557284..3558399 - 371 58582947 - XOO3324 - DnaJ domain-containing protein 2981 64.03 0 3558411..3558827 - 138 58582948 - XOO3325 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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