version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2782 61.20 0 3334486..3335034 - 182 58582733 - XOO3110 - putative ISXo8 transposase 2783 58.91 -1 3335427..3335903 + 158 58582734 - XOO3111 - putative transposase 2784 65.14 0 3336018..3338369 - 783 58582735 - XOO3112 - hypothetical protein 2785 60.24 -1 3339105..3339524 - 139 58582737 btuB XOO3114 - TonB-dependent receptor 2786 57.48 -1 3339567..3339947 - 126 58582738 btuB XOO3115 - TonB-dependent receptor 2787 58.97 -1 3339986..3340492 - 168 58582739 btuB XOO3116 - TonB-dependent receptor 2788 55.15 -2 3340547..3340711 + 54 58582740 tnpX1 XOO3117 - IS1113 transposase 2789 62.37 0 3340718..3341788 + 356 58582741 tnpX1 XOO3118 - IS1113 transposase 2790 65.11 0 3341798..3342886 - 362 58582742 btuB XOO3119 - TonB-dependent receptor 2791 64.45 0 3343242..3345587 - 781 122879241 - XOO3120 - peptidase 2792 65.27 0 3345909..3347624 - 571 58582744 xsa XOO3121 - xylosidase; arabinosidase 2793 64.21 0 3347492..3351766 - 1424 58582745 - XOO3122 - hypothetical protein 2794 61.30 0 3352095..3355040 - 981 58582746 btuB XOO3123 - TonB-dependent receptor 2795 66.33 0 3355433..3357838 - 801 58582747 - XOO3124 - hypothetical protein 2796 66.16 0 3358254..3359825 + 523 122879242 - XOO3125 - peptidase 2797 60.96 0 3360032..3360364 - 110 58582749 - XOO3126 - hypothetical protein 2798 66.50 0 3360673..3361263 - 196 58582750 - XOO3127 - hypothetical protein 2799 70.00 +1 3361305..3361514 - 69 58582751 - XOO3128 - hypothetical protein 2800 66.67 0 3361511..3361702 - 63 58582752 - XOO3129 - hypothetical protein 2801 62.15 0 3361758..3362045 - 95 58582753 - XOO3130 - hypothetical protein 2802 64.74 0 3362042..3364381 - 779 122879243 - XOO3131 - peptidase 2803 63.20 0 3364371..3365957 - 528 58582755 yveA XOO3132 - amino acid permease 2804 63.15 0 3366020..3367696 - 558 58582756 - XOO3133 - hypothetical protein 2805 63.23 0 3367883..3369715 - 610 58582757 - XOO3134 - hypothetical protein 2806 66.91 0 3369833..3371062 - 409 58582758 pepQ XOO3135 - proline dipeptidase 2807 67.66 +1 3371029..3372645 - 538 122879244 - XOO3136 - ketoglutarate semialdehyde dehydrogenase 2808 65.79 0 3372856..3373764 - 302 58582760 dapA XOO3137 - dihydrodipicolinate synthetase 2809 69.21 +1 3373761..3375095 - 444 58582761 - XOO3138 - oxidoreductase 2810 70.73 +1 3375067..3375312 - 81 58582762 soxA XOO3139 - sarcosine oxidase alpha subunit 2811 70.70 +1 3375309..3376571 - 420 58582763 - XOO3140 - D-amino acid oxidase 2812 65.98 0 3376571..3377596 - 341 58582764 - XOO3141 - hypothetical protein 2813 61.87 0 3377655..3378383 + 242 58582765 - XOO3142 - transcriptional regulator 2814 67.61 +1 3378399..3380204 + 601 58582766 ftsY XOO3143 - cell division protein 2815 65.18 0 3380683..3381756 + 357 58582767 mutY XOO3144 - A/G-specific adenine glycosylase 2816 62.00 0 3381759..3382058 + 99 58582768 - XOO3145 - hypothetical protein 2817 60.53 0 3382758..3384044 - 428 58582770 fixL XOO3147 - sensor histidine kinase 2818 62.69 0 3384922..3385701 + 259 58582771 - XOO3148 - IS1478 transposase 2819 62.31 0 3385741..3386382 + 213 58582772 - XOO3149 - IS1478 transposase 2820 63.66 0 3386372..3386836 + 154 58582773 - XOO3150 - hypothetical protein 2821 69.84 +1 3386809..3386934 + 41 58582774 - XOO3151 - hypothetical protein 2822 64.90 0 3386951..3387460 - 169 58582775 - XOO3152 - hypothetical protein 2823 65.02 0 3387885..3388127 - 80 58582776 - XOO3153 - hypothetical protein 2824 64.61 0 3389143..3390066 - 307 58582777 - XOO3154 - hypothetical protein 2825 66.54 0 3390063..3390881 - 272 58582778 - XOO3155 - hypothetical protein 2826 64.17 0 3390997..3391317 + 106 58582779 - XOO3156 - hypothetical protein 2827 58.70 -1 3391824..3392300 - 158 58582780 - XOO3157 - putative transposase 2828 58.33 -1 3392266..3392637 - 123 58582781 - XOO3158 - putative transposase 2829 64.09 0 3392844..3393812 - 322 58582783 - XOO3160 - putative transposase 2830 67.33 +1 3395240..3395842 + 200 58582784 blc XOO3161 - outer membrane lipoprotein Blc 2831 67.34 +1 3398390..3398986 + 198 58582786 - XOO3163 - putative transposase 2832 63.06 0 3398983..3399426 + 147 58582787 - XOO3164 - putative transposase 2833 61.23 0 3399673..3400830 + 385 58582788 tISRso5 XOO3165 - ISRSO5-transposase protein 2834 65.14 0 3400948..3401928 - 326 58582789 gumN XOO3166 - GumN 2835 65.80 0 3402038..3402499 - 153 58582790 - XOO3167 - hypothetical protein 2836 63.65 0 3402534..3403328 - 264 58582791 gumM XOO3168 - GumM 2837 56.48 -2 3403333..3404127 - 264 58582792 gumL XOO3169 - GumL 2838 60.57 0 3404164..3405360 - 398 58582793 gumK XOO3170 - glucuronosyltransferase GumK 2839 62.51 0 3405425..3406939 - 504 58582794 gumJ XOO3171 - GumJ 2840 64.00 0 3406936..3407985 - 349 58582795 gumI XOO3172 - GumI 2841 60.37 0 3407982..3409124 - 380 58582796 gumH XOO3173 - GumH 2842 62.12 0 3409192..3410268 - 358 122879245 gumG XOO3174 - GumG 2843 60.53 0 3410285..3411376 - 363 58582798 gumF XOO3175 - GumF 2844 57.37 -1 3411373..3412674 - 433 58582799 gumE XOO3176 - GumE 2845 60.82 0 3412757..3414277 - 506 58582800 gumD XOO3177 - GumD 2846 57.96 -1 3414455..3415936 - 493 58582801 gumC XOO3178 - GumC 2847 58.94 -1 3415876..3416574 - 232 58582802 gumB XOO3179 - GumB 2848 61.62 0 3417183..3417539 - 118 58582803 - XOO3180 - hypothetical protein 2849 57.67 -1 3417520..3417819 - 99 58582804 ihfA XOO3181 - integration host factor subunit alpha 2850 66.12 0 3417841..3420219 - 792 58582805 pheT XOO3182 - phenylalanyl-tRNA synthetase subunit beta 2851 63.86 0 3420328..3421323 - 331 58582806 pheS XOO3183 - phenylalanyl-tRNA synthetase subunit alpha 2852 60.28 -1 3421578..3421937 - 119 58582807 rplT XOO3184 - 50S ribosomal protein L20 2853 61.62 0 3421948..3422145 - 65 58582808 rpmI XOO3185 - 50S ribosomal protein L35 2854 59.79 -1 3422394..3422873 - 159 58582809 infC XOO3186 - translation initiation factor IF-3 2855 62.80 0 3422985..3425000 - 671 58582810 thrS XOO3187 - threonyl-tRNA synthetase 2856 60.22 -1 3425306..3425398 + 30 58582811 - XOO3188 - maltose transport gene repressor 2857 61.16 0 3425454..3426143 + 229 58582812 - XOO3189 - IS1404 transposase 2858 61.57 0 3425692..3425907 + 71 58582813 - XOO3190 - IS1404 transposase 2859 62.26 0 3426140..3426457 + 105 58582814 - XOO3191 - IS1389 transposase 2860 57.66 -1 3426570..3426791 - 73 58582815 - XOO3192 - IS1478 transposase 2861 60.24 -1 3427182..3429203 - 673 122879246 uvrB XOO3193 - excinuclease ABC subunit B 2862 59.67 -1 3429342..3429884 + 180 58582817 fimT XOO3194 - fimbrial biogenesis protein 2863 60.09 -1 3430063..3430518 - 151 58582818 pilE1 XOO3195 - type IV pilin 2864 55.09 -2 3430525..3434049 - 1174 58582819 pilY1 XOO3196 - PilY1 2865 61.62 0 3434053..3435141 - 362 58582820 - XOO3197 - putative transposase 2866 61.40 0 3435144..3436112 + 322 58582821 - XOO3198 - putative transposase 2867 57.84 -1 3436705..3437214 - 169 58582822 pilX XOO3199 - PilX 2868 59.98 -1 3437218..3438384 - 388 58582823 - XOO3200 - hypothetical protein 2869 57.17 -1 3438381..3438854 - 157 58582824 pilV XOO3201 - pre-pilin leader sequence 2870 62.40 0 3438851..3439366 - 171 58582825 fimT XOO3202 - pre-pilin like leader sequence 2871 64.29 0 3439536..3440921 - 461 58582826 - XOO3203 - hypothetical protein 2872 56.43 -2 3441028..3444222 - 1064 58582827 oar XOO3204 - Oar protein 2873 64.40 0 3444980..3445642 - 220 58582828 - XOO3205 - hypothetical protein 2874 69.09 +1 3445576..3446319 - 247 58582829 - XOO3206 - short chain dehydrogenase 2875 59.81 -1 3446316..3446636 - 106 58582830 - XOO3207 - hypothetical protein 2876 63.39 0 3446758..3447336 + 192 58582831 sodB XOO3208 - iron superoxide dismutase 2877 65.88 0 3447478..3448623 - 381 58582832 purK XOO3209 - phosphoribosylaminoimidazole carboxylase ATPase subunit 2878 65.67 0 3448620..3449123 - 167 58582833 purE XOO3210 - phosphoribosylaminoimidazole carboxylase catalytic subunit 2879 65.19 0 3449182..3449451 + 89 58582834 - XOO3211 - hypothetical protein 2880 67.23 0 3449448..3450335 + 295 58582835 nadC XOO3212 - nicotinate-nucleotide pyrophosphorylase 2881 66.05 0 3450471..3451439 + 322 58582836 - XOO3213 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0