IslandPathversion 1.0

IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 63.81 STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2732	 70.24	+1	3267652..3268968	-	438	58582662	-	XOO3039	-	hypothetical protein
2733	 70.29	+1	3271738..3272289	-	183	58582665	-	XOO3042	-	hypothetical protein
2734	 65.10	0	3272286..3274334	-	682	58582666	-	XOO3043	-	hypothetical protein
2735	 59.92	-1	3275021..3275272	-	83	58582667	-	XOO3044	-	IS1479 transposase
2736	 63.99	0	3276579..3279377	-	932	58582668	clpB	XOO3045	-	ClpB
2737	 67.63	+1	3279317..3280357	-	346	58582669	-	XOO3046	-	hypothetical protein
2738	 65.50	0	3280291..3282168	-	625	58582670	-	XOO3047	-	hypothetical protein
2739	 64.09	0	3282172..3282675	-	167	58582671	-	XOO3048	-	hypothetical protein
2740	 67.03	0	3282663..3283496	-	277	58582672	-	XOO3049	-	hypothetical protein
2741	 58.53	-1	3283532..3284035	-	167	58582673	-	XOO3050	-	hypothetical protein
2742	 62.15	0	3284135..3285706	-	523	58582674	-	XOO3051	-	hypothetical protein
2743	 60.63	0	3285642..3286337	-	231	58582675	-	XOO3052	-	hypothetical protein
2744	 64.95	0	3286670..3287311	-	213	58582676	-	XOO3053	-	hypothetical protein
2745	 61.30	0	3287507..3288475	-	322	58582677	-	XOO3054	-	putative transposase
2746	 64.16	0	3288624..3289262	+	212	58582679	-	XOO3056	-	transposase
2747	 67.52	+1	3290771..3291826	-	351	58582683	-	XOO3060	-	hypothetical protein
2748	 45.93	-2	3291851..3292588	-	245	58582684	-	XOO3061	-	hypothetical protein
2749	 62.80	0	3292619..3295672	-	1017	58582685	-	XOO3062	-	hypothetical protein
2750	 56.03	-2	3295691..3296038	-	115	58582686	-	XOO3063	-	IS1404 transposase
2751	 61.20	0	3296041..3297009	+	322	58582687	-	XOO3064	-	putative transposase
2752	 66.90	0	3297271..3298992	-	573	122879238	-	XOO3065	-	hypothetical protein
2753	 65.88	0	3299108..3299743	-	211	58582689	-	XOO3066	-	hypothetical protein
2754	 64.21	0	3299706..3300152	+	148	58582690	phhB	XOO3067	-	pterin-4-alpha-carbinolamine dehydratase
2755	 69.98	+1	3300149..3300571	+	140	58582691	-	XOO3068	-	hypothetical protein
2756	 65.13	0	3300847..3301107	+	86	58582693	-	XOO3070	-	hypothetical protein
2757	 67.32	+1	3301423..3303246	+	607	58582694	-	XOO3071	-	hypothetical protein
2758	 66.26	0	3303279..3304265	-	328	58582695	rluC	XOO3072	-	pseudouridylate synthase
2759	 65.67	0	3304667..3308365	+	1232	122879239	rne	XOO3073	-	ribonuclease E
2760	 59.86	-1	3309787..3310506	-	239	58582700	gacA	XOO3077	-	LuxR/UhpA family transcriptional regulator
2761	 62.93	0	3310656..3311351	-	231	58582701	-	XOO3078	-	hypothetical protein
2762	 65.08	0	3311517..3312020	-	167	58582702	-	XOO3079	-	hypothetical protein
2763	 63.89	0	3312049..3312372	+	107	58582703	fkpA	XOO3080	-	FKBP-type peptidyl-prolyl cis-trans isomerase
2764	 65.32	0	3312384..3313646	+	420	58582704	-	XOO3081	-	hypothetical protein
2765	 65.04	0	3313630..3314922	-	430	58582705	vipA	XOO3082	-	polysaccharide biosynthetic protein
2766	 63.30	0	3314905..3316062	+	385	58582706	-	XOO3083	-	phosphopantetheinyl transferase
2767	 61.44	0	3316108..3316815	+	235	58582707	-	XOO3084	-	putative ISXo8 transposase
2768	 63.03	0	3316819..3318054	-	411	58582708	-	XOO3085	-	transposase
2769	 62.64	0	3319354..3319701	-	115	58582711	-	XOO3088	-	hypothetical protein
2770	 60.42	0	3319937..3321040	+	367	58582712	tnp	XOO3089	-	transposase
2771	 62.96	0	3322112..3322327	-	71	58582715	-	XOO3092	-	IS1479 transposase
2772	 64.23	0	3323012..3323422	+	136	58582718	-	XOO3095	-	putative transposase
2773	 62.93	0	3324406..3325422	-	338	58582720	-	XOO3097	-	transposase
2774	 61.98	0	3326247..3326438	-	63	58582724	nasT	XOO3101	-	histidine kinase/response regulator hybrid protein
2775	 68.30	+1	3326579..3327556	+	325	122879240	cysG	XOO3102	-	siroheme synthase
2776	 64.87	0	3327766..3328155	+	129	58582726	pedG	XOO3103	-	putative FAD-dependent monooxygenase
2777	 67.85	+1	3328757..3329263	-	168	58582727	-	XOO3104	-	AraC-type DNA-binding domain-containing proteins
2778	 66.51	0	3330299..3330952	-	217	58582728	mobA	XOO3105	-	molybdopterin guanine dinucleotide synthase
2779	 67.15	0	3330906..3332159	-	417	58582729	moeA	XOO3106	-	molybdopterin biosynthesis
2780	 58.61	-1	3332383..3332742	+	119	58582730	-	XOO3107	-	hypothetical protein
2781	 63.03	0	3333249..3334265	+	338	58582732	-	XOO3109	-	transposase
2782	 61.20	0	3334486..3335034	-	182	58582733	-	XOO3110	-	putative ISXo8 transposase
2783	 58.91	-1	3335427..3335903	+	158	58582734	-	XOO3111	-	putative transposase
2784	 65.14	0	3336018..3338369	-	783	58582735	-	XOO3112	-	hypothetical protein
2785	 60.24	-1	3339105..3339524	-	139	58582737	btuB	XOO3114	-	TonB-dependent receptor
2786	 57.48	-1	3339567..3339947	-	126	58582738	btuB	XOO3115	-	TonB-dependent receptor
2787	 58.97	-1	3339986..3340492	-	168	58582739	btuB	XOO3116	-	TonB-dependent receptor
2788	 55.15	-2	3340547..3340711	+	54	58582740	tnpX1	XOO3117	-	IS1113 transposase
2789	 62.37	0	3340718..3341788	+	356	58582741	tnpX1	XOO3118	-	IS1113 transposase
2790	 65.11	0	3341798..3342886	-	362	58582742	btuB	XOO3119	-	TonB-dependent receptor
2791	 64.45	0	3343242..3345587	-	781	122879241	-	XOO3120	-	peptidase
2792	 65.27	0	3345909..3347624	-	571	58582744	xsa	XOO3121	-	xylosidase; arabinosidase
2793	 64.21	0	3347492..3351766	-	1424	58582745	-	XOO3122	-	hypothetical protein
2794	 61.30	0	3352095..3355040	-	981	58582746	btuB	XOO3123	-	TonB-dependent receptor
2795	 66.33	0	3355433..3357838	-	801	58582747	-	XOO3124	-	hypothetical protein
2796	 66.16	0	3358254..3359825	+	523	122879242	-	XOO3125	-	peptidase
2797	 60.96	0	3360032..3360364	-	110	58582749	-	XOO3126	-	hypothetical protein
2798	 66.50	0	3360673..3361263	-	196	58582750	-	XOO3127	-	hypothetical protein
2799	 70.00	+1	3361305..3361514	-	69	58582751	-	XOO3128	-	hypothetical protein
2800	 66.67	0	3361511..3361702	-	63	58582752	-	XOO3129	-	hypothetical protein
2801	 62.15	0	3361758..3362045	-	95	58582753	-	XOO3130	-	hypothetical protein
2802	 64.74	0	3362042..3364381	-	779	122879243	-	XOO3131	-	peptidase
2803	 63.20	0	3364371..3365957	-	528	58582755	yveA	XOO3132	-	amino acid permease
2804	 63.15	0	3366020..3367696	-	558	58582756	-	XOO3133	-	hypothetical protein
2805	 63.23	0	3367883..3369715	-	610	58582757	-	XOO3134	-	hypothetical protein
2806	 66.91	0	3369833..3371062	-	409	58582758	pepQ	XOO3135	-	proline dipeptidase
2807	 67.66	+1	3371029..3372645	-	538	122879244	-	XOO3136	-	ketoglutarate semialdehyde dehydrogenase
2808	 65.79	0	3372856..3373764	-	302	58582760	dapA	XOO3137	-	dihydrodipicolinate synthetase
2809	 69.21	+1	3373761..3375095	-	444	58582761	-	XOO3138	-	oxidoreductase
2810	 70.73	+1	3375067..3375312	-	81	58582762	soxA	XOO3139	-	sarcosine oxidase alpha subunit
2811	 70.70	+1	3375309..3376571	-	420	58582763	-	XOO3140	-	D-amino acid oxidase
2812	 65.98	0	3376571..3377596	-	341	58582764	-	XOO3141	-	hypothetical protein
2813	 61.87	0	3377655..3378383	+	242	58582765	-	XOO3142	-	transcriptional regulator
2814	 67.61	+1	3378399..3380204	+	601	58582766	ftsY	XOO3143	-	cell division protein
2815	 65.18	0	3380683..3381756	+	357	58582767	mutY