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Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2634 64.25 0 3141054..3141755 + 233 58582556 - XOO2933 - hypothetical protein 2635 65.00 0 3142083..3142382 - 99 58582557 - XOO2934 - endolysin 2636 62.34 0 3142425..3142655 - 76 58582558 rsc17 XOO2935 - bacteriophage endolysin protein 2637 60.40 0 3142899..3143648 - 249 58582559 - XOO2936 - isopentenyl transferase 2638 64.77 0 3145221..3145748 - 175 58582560 - XOO2937 - hypothetical protein 2639 57.75 -1 3146351..3146563 - 70 58582561 csrA XOO2938 - carbon storage regulator 2640 62.89 0 3146703..3149351 - 882 58582562 alaS XOO2939 - alanyl-tRNA synthetase 2641 63.07 0 3149453..3149980 - 175 58582563 recX XOO2940 - recombination regulator RecX 2642 61.85 0 3150244..3151365 - 373 58582564 recA XOO2941 - recombinase A 2643 63.86 0 3151451..3152128 - 225 58582565 lexA XOO2942 - LexA repressor 2644 65.28 0 3152181..3153908 - 575 58582566 aarF XOO2943 - ubiquinone biosynthesis protein 2645 65.45 0 3154335..3154829 - 164 58582567 - XOO2944 - hypothetical protein 2646 65.30 0 3155261..3156580 - 439 58582568 hflX XOO2945 - GTP-binding protein 2647 55.76 -2 3156592..3156921 - 109 58582569 hfq XOO2946 - RNA-binding protein Hfq 2648 66.67 0 3156948..3158012 - 354 58582570 miaA XOO2947 - tRNA delta(2)-isopentenylpyrophosphate transferase 2649 63.07 0 3158953..3160899 - 648 58582572 hflB XOO2949 - cell division protein 2650 63.41 0 3160955..3161629 - 224 58582573 ftsJ XOO2950 - cell division protein 2651 61.11 0 3161653..3161958 + 101 58582574 - XOO2951 - hypothetical protein 2652 64.00 0 3161974..3162348 + 124 58582575 - XOO2952 - hypothetical protein 2653 65.92 0 3162541..3163341 - 266 58582576 nlpD XOO2953 - lipoprotein 2654 63.58 0 3163311..3163925 - 204 58582577 - XOO2954 - hypothetical protein 2655 67.85 +1 3163944..3164621 - 225 58582578 pcm XOO2955 - L-isoaspartate protein carboxylmethyltransferase type II 2656 66.17 0 3164618..3165421 - 267 58582579 surE XOO2956 - stationary phase survival protein SurE 2657 66.83 0 3165431..3166036 + 201 58582580 - XOO2957 - hypothetical protein 2658 66.13 0 3166451..3167560 - 369 161898977 truD XOO2959 - tRNA pseudouridine synthase D 2659 65.24 0 3167681..3168172 - 163 58582583 ispF XOO2960 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2660 68.01 +1 3168328..3169146 - 272 58582584 ispD XOO2961 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2661 63.93 0 3169143..3169508 - 121 58582585 ftsB XOO2962 - cell division protein FtsB 2662 64.12 0 3169512..3170885 - 457 58582586 eno XOO2963 - phosphopyruvate hydratase 2663 64.29 0 3170929..3171180 - 83 58582587 - XOO2964 - hypothetical protein 2664 63.06 0 3171287..3172117 - 276 122879232 kdsA XOO2966 - 2-dehydro-3-deoxyphosphooctonate aldolase 2665 63.60 0 3172321..3173985 - 554 161898976 pyrG XOO2967 - CTP synthetase 2666 71.19 +2 3174160..3174402 - 80 58582591 - XOO2968 - hypothetical protein 2667 63.06 0 3174435..3176456 + 673 58582592 parE XOO2969 - DNA topoisomerase IV subunit B 2668 58.70 -1 3176475..3176951 - 158 58582593 - XOO2970 - putative transposase 2669 58.55 -1 3176917..3177384 - 155 58582594 - XOO2971 - putative transposase 2670 63.82 0 3177689..3179197 + 502 122879233 - XOO2972 - carboxypeptidase-related protein 2671 62.72 0 3179255..3179887 - 210 58582596 - XOO2973 - hypothetical protein 2672 64.89 0 3180093..3181220 - 375 58582597 pitA XOO2974 - transport protein 2673 60.83 0 3181230..3181880 - 216 58582598 - XOO2975 - hypothetical protein 2674 63.39 0 3182129..3183469 + 446 58582599 tlyC XOO2976 - hemolysin 2675 63.53 0 3183453..3184121 + 222 58582600 exoD XOO2977 - ExoD protein 2676 62.08 0 3184153..3184653 - 166 58582601 - XOO2978 - general stress protein 2677 65.77 0 3184714..3185715 - 333 122879234 - XOO2979 - hypothetical protein 2678 63.91 0 3186520..3187935 + 471 58582603 - XOO2980 - MFS transporter 2679 65.10 0 3188243..3190027 - 594 58582604 - XOO2981 - ABC transporter ATP-binding protein 2680 64.99 0 3190058..3191128 - 356 58582605 - XOO2982 - hypothetical protein 2681 62.45 0 3191087..3192769 + 560 58582606 - XOO2983 - Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2682 64.61 0 3192859..3194073 + 404 58582607 - XOO2984 - hypothetical protein 2683 65.14 0 3194177..3195289 - 370 58582608 - XOO2985 - hexosyltransferase 2684 66.17 0 3195286..3196485 - 399 58582609 - XOO2986 - glycosyltransferase 2685 67.83 +1 3196538..3197311 - 257 58582610 bioC XOO2987 - biotin synthesis protein 2686 67.79 +1 3197233..3198480 - 415 58582611 - XOO2988 - hypothetical protein 2687 66.19 0 3198481..3199323 - 280 58582612 - XOO2989 - methyltransferase 2688 66.43 0 3199604..3200455 - 283 58582613 - XOO2990 - hypothetical protein 2689 64.25 0 3201631..3202581 - 316 58582615 - XOO2992 - glycosyl transferase 2690 63.40 0 3202578..3203831 - 417 58582616 - XOO2993 - lipopolysaccharide biosynthesis protein 2691 63.11 0 3203828..3204952 - 374 58582617 - XOO2994 - aminotransferase 2692 62.86 0 3204940..3205938 - 332 58582618 - XOO2995 - hypothetical protein 2693 63.30 0 3205859..3206749 - 296 58582619 - XOO2996 - hypothetical protein 2694 60.12 -1 3206816..3207502 - 228 58582620 - XOO2997 - hypothetical protein 2695 61.57 0 3207484..3207915 - 143 58582621 - XOO2998 - hypothetical protein 2696 68.63 +1 3208331..3208840 + 169 122879235 - XOO2999 - cytochrome like B561 2697 64.22 0 3208837..3210264 + 475 58582623 - XOO3000 - cytochrome C 2698 63.11 0 3210317..3210682 + 121 122879236 cycA XOO3001 - cytochrome C2 2699 67.31 +1 3210834..3211913 + 359 58582625 - XOO3002 - hypothetical protein 2700 64.81 0 3211965..3212558 + 197 58582626 rpoE XOO3003 - RNA polymerase sigma-E factor 2701 68.04 +1 3212555..3213211 + 218 58582628 - XOO3005 - hypothetical protein 2702 66.89 0 3213208..3214533 + 441 122879237 - XOO3004 - serine protease 2703 63.90 0 3214544..3215302 + 252 58582629 ccmC XOO3006 - heme exporter protein C; cytochrome C-type biogenesis protein 2704 68.12 +1 3215299..3215505 + 68 58582631 - XOO3008 - hypothetical protein 2705 64.33 0 3215502..3215972 + 156 161898975 cycJ XOO3007 - cytochrome c-type biogenesis protein CcmE 2706 64.91 0 3216036..3218024 + 662 58582632 cycK XOO3009 - C-type cytochrome biogenesis membrane protein 2707 64.83 0 3218021..3218563 + 180 58582633 dsbE XOO3010 - C-type cytochrome biogenesis protein/thioredoxin 2708 64.63 0 3218563..3219054 + 163 58582634 cycL XOO3011 - C-type cytochrome biogenesis protein 2709 65.96 0 3219048..3219758 + 236 58582635 - XOO3012 - hypothetical protein 2710 65.83 0 3219883..3223686 + 1267 58582636 pthA2 XOO3013 - avirulence protein 2711 66.82 0 3224466..3229838 + 1790 58582637 - XOO3014 - avirulence protein 2712 65.83 0 3230618..3234457 + 1279 58582638 pthA3 XOO3015 - avirulence protein 2713 62.63 0 3234937..3235530 - 197 58582639 - XOO3016 - cation/multidrug efflux pump 2714 65.06 0 3235520..3237010 - 496 58582640 - XOO3017 - IS1478 transposase 2715 62.88 0 3237093..3239681 - 862 58582641 mexB XOO3018 - multidrug efflux transporter 2716 67.30 0 3239738..3240850 - 370 58582642 - XOO3019 - hypothetical protein 2717 67.36 +1 3240975..3241553 + 192 58582643 - XOO3020 - hypothetical protein 2718 66.04 0 3243039..3245126 + 695 58582645 - XOO3022 - putative type III effector HolPsyAE 2719 59.65 -1 3250458..3250799 + 113 58582649 - XOO3026 - IS1404 transposase 2720 61.93 0 3250793..3251320 + 175 58582650 - XOO3027 - IS1404 transposase 2721 64.63 0 3251283..3252068 - 261 58582651 - XOO3028 - putative transposase 2722 56.49 -2 3252116..3252754 + 212 58582652 - XOO3029 - Tn5044 transposase 2723 65.26 0 3253076..3253855 + 259 58582653 - XOO3030 - VirG-like two component response regulator 2724 64.85 0 3253852..3254844 + 330 58582654 - XOO3031 - cytochrome C peroxidase 2725 65.89 0 3254841..3257300 + 819 58582655 virA XOO3032 - VirA-like protein 2726 66.16 0 3257414..3258394 + 326 58582656 - XOO3033 - hypothetical protein 2727 66.47 0 3258391..3259431 + 346 58582657 - XOO3034 - hypothetical protein 2728 69.83 +1 3259927..3262830 - 967 58582658 - XOO3035 - serine/threonine kinase 2729 69.29 +1 3262827..3263549 - 240 58582659 ptc1 XOO3036 - phosphoprotein phosphatase 2730 68.35 +1 3263546..3264199 - 217 58582660 - XOO3037 - hypothetical protein 2731 68.37 +1 3264190..3267648 - 1152 58582661 - XOO3038 - hypothetical protein 2732 70.24 +1 3267652..3268968 - 438 58582662 - XOO3039 - hypothetical protein 2733 70.29 +1 3271738..3272289 - 183 58582665 - XOO3042 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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