IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2597	 65.25	0	3106412..3107614	-	400	58582518	avtA	XOO2895	-	valine-pyruvate aminotransferase
2598	 64.08	0	3107848..3108156	-	102	58582519	-	XOO2896	-	hypothetical protein
2599	 59.65	-1	3108184..3108411	-	75	58582520	-	XOO2897	-	hypothetical protein
2600	 67.84	+1	3108468..3108722	-	84	58582521	-	XOO2898	-	hypothetical protein
2601	 66.51	0	3108724..3110589	-	621	58582522	feoB	XOO2899	-	ferrous iron transport protein B
2602	 63.57	0	3110580..3110870	-	96	58582523	feoA	XOO2900	-	ferrous iron transport protein
2603	 67.17	0	3110943..3111740	+	265	58582524	-	XOO2901	-	enoyl-CoA hydratase
2604	 65.38	0	3111737..3112126	+	129	58582525	-	XOO2902	-	hypothetical protein
2605	 68.04	+1	3112197..3113216	+	339	58582526	mvaB	XOO2903	-	hydroxymethylglutaryl-CoA lyase
2606	 67.70	+1	3113233..3114003	+	256	122879226	hadH2	XOO2904	-	3-hydroxyacyl-CoA dehydrogenase type II
2607	 61.38	0	3114125..3114691	+	188	58582528	yeiP	XOO2905	-	elongation factor P
2608	 61.97	0	3114844..3115077	+	77	58582529	-	XOO2906	-	hypothetical protein
2609	 61.15	0	3115584..3116036	-	150	58582530	-	XOO2907	-	hypothetical protein
2610	 63.90	0	3116940..3118385	-	481	122879227	xylE	XOO2909	-	MFS transporter
2611	 62.03	0	3118452..3119789	-	445	58582533	xylA	XOO2910	-	xylose isomerase
2612	 65.27	0	3119838..3121343	-	501	58582534	-	XOO2911	-	D-xylulokinase
2613	 64.36	0	3121328..3121891	-	187	58582535	-	XOO2912	-	hypothetical protein
2614	 66.16	0	3121675..3122463	-	262	58582536	-	XOO2913	-	hypothetical protein
2615	 62.84	0	3122549..3125452	-	967	122879228	xylS	XOO2914	-	alpha-xylosidase
2616	 62.04	0	3125733..3126056	+	107	58582538	-	XOO2915	-	relaxation protein
2617	 64.35	0	3126254..3127291	-	345	58582539	gbpR	XOO2916	-	galactose-binding protein regulator
2618	 67.30	0	3127638..3128270	+	210	161898978	dgoA	XOO2917	-	2-dehydro-3-deoxy-6-phosphogalactonate aldolase
2619	 64.58	0	3128267..3129415	+	382	58582542	dgoA	XOO2919	-	4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase
2620	 65.57	0	3129409..3130320	+	303	122879229	-	XOO2918	-	regucalcin
2621	 69.26	+1	3130269..3131195	+	308	58582543	dgoK	XOO2920	-	2-oxo-3-deoxygalactonate kinase
2622	 61.11	0	3131278..3131601	+	107	58582544	-	XOO2921	-	ferredoxin
2623	 67.85	+1	3131726..3132319	-	197	58582545	-	XOO2922	-	hypothetical protein
2624	 67.88	+1	3132261..3133169	-	302	122879230	dapA	XOO2923	-	dihydrodipicolinate synthase
2625	 61.56	0	3133263..3133889	+	208	58582547	gcvR	XOO2924	-	glycine cleavage system transcriptional repressor
2626	 58.69	-1	3133901..3134251	+	116	58582548	-	XOO2925	-	hypothetical protein
2627	 61.49	0	3134289..3134771	+	160	58582549	-	XOO2926	-	bacterioferritin comigratory protein
2628	 61.87	0	3134854..3136251	+	465	122879231	-	XOO2927	-	hypothetical protein
2629	 65.68	0	3136818..3137627	+	269	58582551	thiD	XOO2928	-	phosphomethylpyrimidine kinase
2630	 67.68	+1	3137735..3137932	+	65	58582552	-	XOO2929	-	hypothetical protein
2631	 64.29	0	3138026..3138487	+	153	58582553	-	XOO2930	-	hypothetical protein
2632	 65.86	0	3138942..3139928	-	328	58582554	-	XOO2931	-	hypothetical protein
2633	 69.21	+1	3139973..3140917	-	314	58582555	-	XOO2932	-	transcriptional regulator
2634	 64.25	0	3141054..3141755	+	233	58582556	-	XOO2933	-	hypothetical protein
2635	 65.00	0	3142083..3142382	-	99	58582557	-	XOO2934	-	endolysin
2636	 62.34	0	3142425..3142655	-	76	58582558	rsc17	XOO2935	-	bacteriophage endolysin protein
2637	 60.40	0	3142899..3143648	-	249	58582559	-	XOO2936	-	isopentenyl transferase
2638	 64.77	0	3145221..3145748	-	175	58582560	-	XOO2937	-	hypothetical protein
2639	 57.75	-1	3146351..3146563	-	70	58582561	csrA	XOO2938	-	carbon storage regulator
2640	 62.89	0	3146703..3149351	-	882	58582562	alaS	XOO2939	-	alanyl-tRNA synthetase
2641	 63.07	0	3149453..3149980	-	175	58582563	recX	XOO2940	-	recombination regulator RecX
2642	 61.85	0	3150244..3151365	-	373	58582564	recA	XOO2941	-	recombinase A
2643	 63.86	0	3151451..3152128	-	225	58582565	lexA	XOO2942	-	LexA repressor
2644	 65.28	0	3152181..3153908	-	575	58582566	aarF	XOO2943	-	ubiquinone biosynthesis protein
2645	 65.45	0	3154335..3154829	-	164	58582567	-	XOO2944	-	hypothetical protein
2646	 65.30	0	3155261..3156580	-	439	58582568	hflX	XOO2945	-	GTP-binding protein
2647	 55.76	-2	3156592..3156921	-	109	58582569	hfq	XOO2946	-	RNA-binding protein Hfq
2648	 66.67	0	3156948..3158012	-	354	58582570	miaA	XOO2947	-	tRNA delta(2)-isopentenylpyrophosphate transferase
2649	 63.07	0	3158953..3160899	-	648	58582572	hflB	XOO2949	-	cell division protein
2650	 63.41	0	3160955..3161629	-	224	58582573	ftsJ	XOO2950	-	cell division protein
2651	 61.11	0	3161653..3161958	+	101	58582574	-	XOO2951	-	hypothetical protein
2652	 64.00	0	3161974..3162348	+	124	58582575	-	XOO2952	-	hypothetical protein
2653	 65.92	0	3162541..3163341	-	266	58582576	nlpD	XOO2953	-	lipoprotein
2654	 63.58	0	3163311..3163925	-	204	58582577	-	XOO2954	-	hypothetical protein
2655	 67.85	+1	3163944..3164621	-	225	58582578	pcm	XOO2955	-	L-isoaspartate protein carboxylmethyltransferase type II
2656	 66.17	0	3164618..3165421	-	267	58582579	surE	XOO2956	-	stationary phase survival protein SurE
2657	 66.83	0	3165431..3166036	+	201	58582580	-	XOO2957	-	hypothetical protein
2658	 66.13	0	3166451..3167560	-	369	161898977	truD	XOO2959	-	tRNA pseudouridine synthase D
2659	 65.24	0	3167681..3168172	-	163	58582583	ispF	XOO2960	-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
2660	 68.01	+1	3168328..3169146	-	272	58582584	ispD	XOO2961	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
2661	 63.93	0	3169143..3169508	-	121	58582585	ftsB	XOO2962	-	cell division protein FtsB
2662	 64.12	0	3169512..3170885	-	457	58582586	eno	XOO2963	-	phosphopyruvate hydratase
2663	 64.29	0	3170929..3171180	-	83	58582587	-	XOO2964	-	hypothetical protein
2664	 63.06	0	3171287..3172117	-	276	122879232	kdsA	XOO2966	-	2-dehydro-3-deoxyphosphooctonate aldolase
2665	 63.60	0	3172321..3173985	-	554	161898976	pyrG	XOO2967	-	CTP synthetase
2666	 71.19	+2	3174160..3174402	-	80	58582591	-	XOO2968	-	hypothetical protein
2667	 63.06	0	3174435..3176456	+	673	58582592	parE	XOO2969	-	DNA topoisomerase IV subunit B
2668	 58.70	-1	3176475..3176951	-	158	58582593	-	XOO2970	-	putative transposase
2669	 58.55	-1	3176917..3177384	-	155	58582594	-	XOO2971	-	putative transposase
2670	 63.82	0	3177689..3179197	+	502	122879233	-	XOO2972	-	carboxypeptidase-related protein
2671	 62.72	0	3179255..3179887	-	210	58582596	-	XOO2973	-	hypothetical protein
2672	 64.89	0	3180093..3181220	-	375	58582597	pitA	XOO2974	-	transport protein
2673	 60.83	0	3181230..3181880	-	216	58582598	-	XOO2975	-	hypothetical protein
2674	 63.39	0	3182129..3183469	+	446	58582599	tlyC	XOO2976	-	hemolysin
2675	 63.53	0	3183453..3184121	+	222	58582600	exoD	XOO2977	-	ExoD protein
2676	 62.08	0	3184153..3184653	-	166	58582601	-	XOO2978	-	general stress protein
2677	 65.77	0	3184714..3185715	-	333	122879234	-	XOO2979	-	hypothetical protein
2678	 63.91	0	3186520..3187935	+	471	58582603	-	XOO2980	-	MFS transporter
2679	 65.10	0	3188243..3190027	-	594	5858260