version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2573 63.86 0 3077063..3077347 - 94 58582489 - XOO2866 - hypothetical protein 2574 55.77 -2 3077400..3077555 - 51 58582490 - XOO2867 - hypothetical protein 2575 61.09 0 3077677..3079272 + 531 58582491 rpfB XOO2868 - putative long-chain fatty acyl CoA ligase 2576 60.64 0 3079323..3080318 + 331 58582492 rpfF XOO2869 - enoyl-CoA hydratase 2577 62.26 0 3080330..3082507 - 725 58582493 rpfC XOO2870 - RpfC 2578 62.86 0 3082872..3084131 - 419 58582494 rpfG XOO2871 - response regulator 2579 66.16 0 3084150..3085736 - 528 58582495 lysS XOO2872 - lysyl-tRNA synthetase 2580 63.74 0 3085871..3086860 - 329 58582496 prfB XOO2873 - peptide chain release factor 2 2581 66.48 0 3087250..3088332 - 360 58582497 rpfD XOO2874 - regulatory protein 2582 62.90 0 3088306..3089607 + 433 58582498 - XOO2875 - inner membrane protein 2583 72.68 +2 3089687..3089869 + 60 58582500 rpfI XOO2877 - regulatory protein 2584 65.09 0 3089860..3090240 + 126 58582501 rpfI XOO2878 - regulatory protein 2585 65.79 0 3090225..3090452 + 75 58582502 rpfI XOO2879 - regulatory protein 2586 64.96 0 3091005..3091706 + 233 122879225 - XOO2880 - hypothetical protein 2587 57.56 -1 3091867..3092349 - 160 58582504 - XOO2881 - hypothetical protein 2588 62.33 0 3092539..3093507 - 322 58582505 - XOO2882 - transposase 2589 63.13 0 3093835..3094851 - 338 58582506 - XOO2883 - transposase 2590 66.03 0 3095548..3097287 - 579 58582507 recJ XOO2884 - single-stranded-DNA-specific exonuclease 2591 67.54 +1 3097284..3098204 - 306 58582508 rpfE XOO2885 - regulatory protein 2592 62.77 0 3098221..3098733 - 170 58582509 greA XOO2886 - transcription elongation factor GreA 2593 63.98 0 3098694..3101936 - 1080 161898980 carB XOO2887 - carbamoyl phosphate synthase large subunit 2594 65.07 0 3102388..3103512 - 374 161898979 carA XOO2888 - carbamoyl phosphate synthase small subunit 2595 54.81 -2 3105224..3105670 - 148 58582516 - XOO2893 - transposase 2596 66.81 0 3105696..3106415 - 239 58582517 - XOO2894 - hypothetical protein 2597 65.25 0 3106412..3107614 - 400 58582518 avtA XOO2895 - valine-pyruvate aminotransferase 2598 64.08 0 3107848..3108156 - 102 58582519 - XOO2896 - hypothetical protein 2599 59.65 -1 3108184..3108411 - 75 58582520 - XOO2897 - hypothetical protein 2600 67.84 +1 3108468..3108722 - 84 58582521 - XOO2898 - hypothetical protein 2601 66.51 0 3108724..3110589 - 621 58582522 feoB XOO2899 - ferrous iron transport protein B 2602 63.57 0 3110580..3110870 - 96 58582523 feoA XOO2900 - ferrous iron transport protein 2603 67.17 0 3110943..3111740 + 265 58582524 - XOO2901 - enoyl-CoA hydratase 2604 65.38 0 3111737..3112126 + 129 58582525 - XOO2902 - hypothetical protein 2605 68.04 +1 3112197..3113216 + 339 58582526 mvaB XOO2903 - hydroxymethylglutaryl-CoA lyase 2606 67.70 +1 3113233..3114003 + 256 122879226 hadH2 XOO2904 - 3-hydroxyacyl-CoA dehydrogenase type II 2607 61.38 0 3114125..3114691 + 188 58582528 yeiP XOO2905 - elongation factor P 2608 61.97 0 3114844..3115077 + 77 58582529 - XOO2906 - hypothetical protein 2609 61.15 0 3115584..3116036 - 150 58582530 - XOO2907 - hypothetical protein 2610 63.90 0 3116940..3118385 - 481 122879227 xylE XOO2909 - MFS transporter 2611 62.03 0 3118452..3119789 - 445 58582533 xylA XOO2910 - xylose isomerase 2612 65.27 0 3119838..3121343 - 501 58582534 - XOO2911 - D-xylulokinase 2613 64.36 0 3121328..3121891 - 187 58582535 - XOO2912 - hypothetical protein 2614 66.16 0 3121675..3122463 - 262 58582536 - XOO2913 - hypothetical protein 2615 62.84 0 3122549..3125452 - 967 122879228 xylS XOO2914 - alpha-xylosidase 2616 62.04 0 3125733..3126056 + 107 58582538 - XOO2915 - relaxation protein 2617 64.35 0 3126254..3127291 - 345 58582539 gbpR XOO2916 - galactose-binding protein regulator 2618 67.30 0 3127638..3128270 + 210 161898978 dgoA XOO2917 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2619 64.58 0 3128267..3129415 + 382 58582542 dgoA XOO2919 - 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase 2620 65.57 0 3129409..3130320 + 303 122879229 - XOO2918 - regucalcin 2621 69.26 +1 3130269..3131195 + 308 58582543 dgoK XOO2920 - 2-oxo-3-deoxygalactonate kinase 2622 61.11 0 3131278..3131601 + 107 58582544 - XOO2921 - ferredoxin 2623 67.85 +1 3131726..3132319 - 197 58582545 - XOO2922 - hypothetical protein 2624 67.88 +1 3132261..3133169 - 302 122879230 dapA XOO2923 - dihydrodipicolinate synthase 2625 61.56 0 3133263..3133889 + 208 58582547 gcvR XOO2924 - glycine cleavage system transcriptional repressor 2626 58.69 -1 3133901..3134251 + 116 58582548 - XOO2925 - hypothetical protein 2627 61.49 0 3134289..3134771 + 160 58582549 - XOO2926 - bacterioferritin comigratory protein 2628 61.87 0 3134854..3136251 + 465 122879231 - XOO2927 - hypothetical protein 2629 65.68 0 3136818..3137627 + 269 58582551 thiD XOO2928 - phosphomethylpyrimidine kinase 2630 67.68 +1 3137735..3137932 + 65 58582552 - XOO2929 - hypothetical protein 2631 64.29 0 3138026..3138487 + 153 58582553 - XOO2930 - hypothetical protein 2632 65.86 0 3138942..3139928 - 328 58582554 - XOO2931 - hypothetical protein 2633 69.21 +1 3139973..3140917 - 314 58582555 - XOO2932 - transcriptional regulator 2634 64.25 0 3141054..3141755 + 233 58582556 - XOO2933 - hypothetical protein 2635 65.00 0 3142083..3142382 - 99 58582557 - XOO2934 - endolysin 2636 62.34 0 3142425..3142655 - 76 58582558 rsc17 XOO2935 - bacteriophage endolysin protein 2637 60.40 0 3142899..3143648 - 249 58582559 - XOO2936 - isopentenyl transferase 2638 64.77 0 3145221..3145748 - 175 58582560 - XOO2937 - hypothetical protein 2639 57.75 -1 3146351..3146563 - 70 58582561 csrA XOO2938 - carbon storage regulator 2640 62.89 0 3146703..3149351 - 882 58582562 alaS XOO2939 - alanyl-tRNA synthetase 2641 63.07 0 3149453..3149980 - 175 58582563 recX XOO2940 - recombination regulator RecX 2642 61.85 0 3150244..3151365 - 373 58582564 recA XOO2941 - recombinase A 2643 63.86 0 3151451..3152128 - 225 58582565 lexA XOO2942 - LexA repressor 2644 65.28 0 3152181..3153908 - 575 58582566 aarF XOO2943 - ubiquinone biosynthesis protein 2645 65.45 0 3154335..3154829 - 164 58582567 - XOO2944 - hypothetical protein 2646 65.30 0 3155261..3156580 - 439 58582568 hflX XOO2945 - GTP-binding protein 2647 55.76 -2 3156592..3156921 - 109 58582569 hfq XOO2946 - RNA-binding protein Hfq 2648 66.67 0 3156948..3158012 - 354 58582570 miaA XOO2947 - tRNA delta(2)-isopentenylpyrophosphate transferase 2649 63.07 0 3158953..3160899 - 648 58582572 hflB XOO2949 - cell division protein 2650 63.41 0 3160955..3161629 - 224 58582573 ftsJ XOO2950 - cell division protein 2651 61.11 0 3161653..3161958 + 101 58582574 - XOO2951 - hypothetical protein 2652 64.00 0 3161974..3162348 + 124 58582575 - XOO2952 - hypothetical protein 2653 65.92 0 3162541..3163341 - 266 58582576 nlpD XOO2953 - lipoprotein 2654 63.58 0 3163311..3163925 - 204 58582577 - XOO2954 - hypothetical protein 2655 67.85 +1 3163944..3164621 - 225 58582578 pcm XOO2955 - L-isoaspartate protein carboxylmethyltransferase type II 2656 66.17 0 3164618..3165421 - 267 58582579 surE XOO2956 - stationary phase survival protein SurE 2657 66.83 0 3165431..3166036 + 201 58582580 - XOO2957 - hypothetical protein 2658 66.13 0 3166451..3167560 - 369 161898977 truD XOO2959 - tRNA pseudouridine synthase D 2659 65.24 0 3167681..3168172 - 163 58582583 ispF XOO2960 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2660 68.01 +1 3168328..3169146 - 272 58582584 ispD XOO2961 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2661 63.93 0 3169143..3169508 - 121 58582585 ftsB XOO2962 - cell division protein FtsB 2662 64.12 0 3169512..3170885 - 457 58582586 eno XOO2963 - phosphopyruvate hydratase 2663 64.29 0 3170929..3171180 - 83 58582587 - XOO2964 - hypothetical protein 2664 63.06 0 3171287..3172117 - 276 122879232 kdsA XOO2966 - 2-dehydro-3-deoxyphosphooctonate aldolase 2665 63.60 0 3172321..3173985 - 554 161898976 pyrG XOO2967 - CTP synthetase 2666 71.19 +2 3174160..3174402 - 80 58582591 - XOO2968 - hypothetical protein 2667 63.06 0 3174435..3176456 + 673 58582592 parE XOO2969 - DNA topoisomerase IV subunit B 2668 58.70 -1 3176475..3176951 - 158 58582593 - XOO2970 - putative transposase 2669 58.55 -1 3176917..3177384 - 155 58582594 - XOO2971 - putative transposase 2670 63.82 0 3177689..3179197 + 502 122879233 - XOO2972 - carboxypeptidase-related protein 2671 62.72 0 3179255..3179887 - 210 58582596 - XOO2973 - hypothetical protein 2672 64.89 0 3180093..3181220 - 375 58582597 pitA XOO2974 - transport protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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