IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2218	 62.76	0	2617628..2618497	+	289	58582087	pstA	XOO2464	-	ABC transporter phosphate permease
2219	 60.77	0	2618520..2619350	+	276	122879190	pstB	XOO2465	-	phosphate ABC transporter ATP-binding protein
2220	 64.35	0	2619413..2620189	+	258	58582089	phoU	XOO2466	-	phosphate regulon transcriptional regulator
2221	 63.73	0	2620322..2620729	+	135	58582090	-	XOO2467	-	hypothetical protein
2222	 63.36	0	2621013..2621648	+	211	58582091	rnt	XOO2468	-	ribonuclease T
2223	 62.33	0	2621656..2623038	+	460	58582092	-	XOO2469	-	putative ISXo8 transposase
2224	 62.38	0	2623275..2624276	-	333	122879191	-	XOO2470	-	putative transposase
2225	 61.51	0	2624369..2625571	+	400	122879192	tnpX1	XOO2471	-	IS1113 transposase
2226	 58.40	-1	2629824..2630198	+	124	58582102	-	XOO2479	-	site-specific recombinase
2227	 60.47	0	2630279..2631247	-	322	58582104	secF	XOO2481	-	preprotein translocase subunit SecF
2228	 63.63	0	2631342..2633186	-	614	58582105	secD	XOO2482	-	preprotein translocase subunit SecD
2229	 63.56	0	2633383..2633736	-	117	58582106	yajC	XOO2483	-	preprotein translocase subunit YajC
2230	 65.01	0	2633868..2635013	-	381	58582107	tgt	XOO2484	-	queuine tRNA-ribosyltransferase
2231	 67.51	+1	2635083..2636267	-	394	58582108	queA	XOO2485	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
2232	 66.44	0	2636319..2636750	-	143	58582109	-	XOO2486	-	AsnC/Lrp family transcriptional regulator
2233	 66.27	0	2636874..2638370	+	498	58582110	-	XOO2487	-	L-lysine 6-aminotransferase
2234	 61.30	0	2638715..2639422	-	235	122879193	-	XOO2488	-	hypothetical protein
2235	 62.15	0	2639813..2640100	-	95	58582112	-	XOO2489	-	hypothetical protein
2236	 59.88	-1	2640143..2640304	-	53	58582113	-	XOO2490	-	hypothetical protein
2237	 66.67	0	2640317..2640628	-	103	58582114	-	XOO2491	-	hypothetical protein
2238	 63.46	0	2640628..2641407	+	259	58582115	-	XOO2492	-	IS1478 transposase
2239	 61.87	0	2641535..2642347	+	270	58582116	-	XOO2493	-	putative ISXo8 transposase
2240	 61.96	0	2642328..2642837	+	169	58582117	-	XOO2494	-	putative ISXo8 transposase
2241	 60.99	0	2643076..2644044	+	322	58582118	-	XOO2495	-	putative transposase
2242	 62.89	0	2644260..2644736	+	158	58582119	-	XOO2496	-	IS1478 transposase
2243	 64.21	0	2644843..2645289	-	148	58582120	-	XOO2497	-	hypothetical protein
2244	 62.59	0	2645290..2645436	-	48	58582121	-	XOO2498	-	hypothetical protein
2245	 62.83	0	2645388..2646509	-	373	58582122	phy	XOO2499	-	putative phytase precursor
2246	 61.40	0	2646506..2648746	-	746	122879194	cirA	XOO2500	-	TonB-dependent receptor
2247	 66.03	0	2649394..2650026	+	210	161898990	upp	XOO2501	-	uracil phosphoribosyltransferase
2248	 54.81	-2	2650396..2650842	+	148	58582125	-	XOO2502	-	transposase
2249	 62.89	0	2651466..2652497	+	343	58582127	-	XOO2504	-	putative transposase
2250	 65.93	0	2652504..2654258	-	584	58582128	ggt	XOO2505	-	gamma-glutamyltranspeptidase
2251	 60.86	0	2654294..2654620	-	108	58582129	-	XOO2506	-	ferredoxin
2252	 61.83	0	2654810..2655367	-	185	58582130	-	XOO2507	-	hypothetical protein
2253	 64.30	0	2655354..2655860	-	168	58582131	coaD	XOO2508	-	phosphopantetheine adenylyltransferase
2254	 72.62	+2	2655857..2656477	-	206	122879195	-	XOO2509	-	hypothetical protein
2255	 62.37	0	2656784..2658622	+	612	58582133	htpG	XOO2510	-	heat shock protein 90
2256	 62.18	0	2659802..2661184	+	460	58582136	-	XOO2513	-	putative ISXo8 transposase
2257	 64.82	0	2661436..2662575	+	379	122879196	moeB	XOO2514	-	molybdopterin biosynthesis protein MoeB
2258	 53.74	-2	2662572..2662718	-	48	58582138	-	XOO2515	-	transposase
2259	 63.13	0	2662801..2663817	+	338	58582139	-	XOO2516	-	transposase
2260	 62.79	0	2663795..2665186	-	463	122879197	-	XOO2517	-	IS1478 transposase
2261	 63.10	0	2665306..2665473	-	55	58582141	-	XOO2518	-	transposase
2262	 54.05	-2	2665470..2665691	-	73	58582142	-	XOO2519	-	transposase
2263	 63.24	0	2665957..2667006	+	349	58582143	-	XOO2520	-	ISxac1 transposase
2264	 57.83	-1	2667092..2667634	-	180	58582144	-	XOO2521	-	IS30 family transposase
2265	 59.49	-1	2667665..2667859	-	64	58582145	-	XOO2522	-	hypothetical protein
2266	 54.04	-2	2668195..2668392	-	65	58582146	-	XOO2523	-	transposase
2267	 64.77	0	2668745..2669008	+	87	58582147	-	XOO2524	-	putative transposase
2268	 65.37	0	2669063..2669449	+	128	58582148	-	XOO2525	-	putative transposase
2269	 61.81	0	2669431..2669718	+	95	58582149	-	XOO2526	-	putative transposase
2270	 66.01	0	2670000..2671220	-	406	58582151	moeA	XOO2528	-	molybdopterin biosynthesis
2271	 62.45	0	2671535..2672932	-	465	161898989	engA	XOO2529	-	GTP-binding protein EngA
2272	 63.88	0	2672943..2674163	-	406	58582153	-	XOO2530	-	hypothetical protein
2273	 62.60	0	2674160..2674798	-	212	58582154	-	XOO2531	-	hypothetical protein
2274	 64.81	0	2674869..2675729	-	286	58582155	-	XOO2532	-	hypothetical protein
2275	 62.12	0	2675726..2676538	-	270	58582156	pilF	XOO2533	-	fimbrial biogenesis protein
2276	 62.19	0	2676525..2677730	-	401	58582157	-	XOO2534	-	hypothetical protein
2277	 62.68	0	2677749..2678174	-	141	58582158	ndk	XOO2535	-	nucleoside diphosphate kinase
2278	 64.61	0	2678394..2679026	+	210	58582159	-	XOO2536	-	TetR family transcriptional regulator
2279	 64.77	0	2679051..2681423	+	790	58582160	fadB	XOO2537	-	3-hydroxyacyl-CoA dehydrogenase
2280	 65.84	0	2681581..2682786	+	401	58582161	fadA	XOO2538	-	acetyl-CoA acetyltransferase
2281	 63.81	0	2683107..2684438	+	443	58582162	-	XOO2539	-	hypothetical protein
2282	 60.71	0	2684721..2685224	+	167	58582163	crcB	XOO2540	-	hypothetical protein
2283	 57.80	-1	2685221..2685547	+	108	58582164	-	XOO2541	-	hypothetical protein
2284	 63.11	0	2685579..2686955	-	458	161898988	-	XOO2542	-	recombination factor protein RarA
2285	 63.23	0	2687192..2691358	+	1388	122879198	-	XOO2543	-	hypothetical protein
2286	 61.90	0	2691471..2692100	-	209	161898987	lolA	XOO2544	-	outer-membrane lipoprotein carrier protein
2287	 64.44	0	2692207..2694135	-	642	58582168	-	XOO2545	-	hypothetical protein
2288	 65.44	0	2694298..2696658	-	786	58582169	ftsK	XOO2546	-	cell division protein
2289	 66.15	0	2696942..2697910	+	322	58582170	trxB	XOO2547	-	thioredoxin reductase
2290	 65.12	0	2697923..2699089	+	388	58582171	-	XOO2548	-	hypothetical protein
2291	 62.87	0	2699315..2699683	+	122	58582172	-	XOO2549	-	hypothetical protein
2292	 64.18	0	2699982..2700383	+	133	58582173	-	XOO2550	-	hypothetical protein
2293	 66.42	0	2700472..2701269	+	265	58582174	aat	XOO2551	-	leucyl/phenylalanyl-tRNA--protein transferase
2294	 54.43	-2	2701332..2701568	+	78	58582175	infA	XOO2552	-	translation initiation factor IF-1
2295	 62.11	0	2701849..2704131	-	760	58582176	clpA	XOO2553	-	ATP-dependent Clp protease subunit
2296	 59.84	-1	2704275..2704655	-	126	58582177	clpS	XOO2554	-	ATP-dependent Clp protease adaptor protein ClpS
2297	 65.01	0	2704822..2705304	+	160	58582178	mutT	XOO2555	-	7,8-dihydro-8-oxoguanine-triphosphatase
2298	 66.93	0	2705301..2706437	+	378	58582179	trmU	XOO2556	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
2299	 67.48	+1	2706434..2707051	+	205	58582180	-	XOO2557	-	hypothetical protein
2300	 62.75	0	2707112..2708389	+	425