IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2171	 66.67	0	2569590..2570552	-	320	58582032	lysS	XOO2409	-	lysyl-tRNA synthetase
2172	 59.46	-1	2570549..2573074	-	841	122879187	ligA	XOO2410	-	NAD-dependent DNA ligase LigA
2173	 62.41	0	2573231..2573371	+	46	58582034	hisC	XOO2411	-	aminotransferase
2174	 64.89	0	2573930..2574661	-	243	58582035	zipA	XOO2412	-	cell division protein ZipA
2175	 65.63	0	2574718..2578374	-	1218	58582036	smc	XOO2413	-	chromosome segregation protein
2176	 64.22	0	2578431..2578880	-	149	58582037	rplI	XOO2414	-	50S ribosomal protein L9
2177	 57.58	-1	2579147..2579377	-	76	58582038	rpsR	XOO2415	-	30S ribosomal protein S18
2178	 61.11	0	2579389..2579820	-	143	58582039	rpsF	XOO2416	-	30S ribosomal protein S6
2179	 64.88	0	2580175..2580621	-	148	58582040	-	XOO2417	-	hypothetical protein
2180	 63.30	0	2580720..2582114	+	464	58582041	asnC	XOO2418	-	asparaginyl-tRNA synthetase
2181	 69.38	+1	2582116..2582373	+	85	58582042	-	XOO2419	-	hypothetical protein
2182	 66.36	0	2582672..2582998	+	108	58582043	-	XOO2420	-	hypothetical protein
2183	 64.36	0	2583336..2583638	+	100	58582045	paiB	XOO2422	-	transcriptional regulator protein Pai2
2184	 60.50	0	2583625..2584386	+	253	58582046	yadF	XOO2423	-	carbonic anhydrase
2185	 59.22	-1	2584442..2585005	+	187	58582047	haaO	XOO2424	-	3-hydroxyanthranilate 3,4-dioxygenase
2186	 69.75	+1	2585018..2585665	+	215	58582048	-	XOO2425	-	hypothetical protein
2187	 67.32	+1	2585915..2587147	+	410	58582050	-	XOO2427	-	hypothetical protein
2188	 68.16	+1	2587206..2588477	+	423	58582051	-	XOO2428	-	kynureninase
2189	 65.72	0	2588649..2590016	+	455	58582052	-	XOO2429	-	kynurenine 3-monooxygenase
2190	 63.90	0	2590320..2591765	+	481	161898991	sbcB	XOO2430	-	exonuclease I
2191	 59.53	-1	2591762..2592448	+	228	58582054	-	XOO2431	-	hypothetical protein
2192	 64.31	0	2592421..2593440	+	339	58582055	-	XOO2432	-	putative oxidoreductase
2193	 62.92	0	2593482..2594042	+	186	58582056	-	XOO2433	-	hypothetical protein
2194	 64.89	0	2594063..2595019	-	318	58582057	-	XOO2434	-	5'-nucleotidase
2195	 58.06	-1	2596193..2596564	+	123	58582059	-	XOO2436	-	putative transposase
2196	 58.49	-1	2596530..2597006	+	158	58582060	-	XOO2437	-	putative transposase
2197	 67.09	0	2597298..2599433	-	711	58582061	-	XOO2438	-	23S rRNA m(2)G2445 methyltransferase
2198	 69.89	+1	2600003..2600281	-	92	58582063	-	XOO2440	-	ABC transporter ATP-binding protein
2199	 67.72	+1	2600287..2601237	-	316	58582064	-	XOO2441	-	ABC transporter ATP-binding protein
2200	 69.82	+1	2601396..2601902	-	168	122879188	-	XOO2442	-	acetyltransferase
2201	 67.80	+1	2601943..2602470	-	175	122879189	-	XOO2443	-	hypothetical protein
2202	 69.28	+1	2602467..2602811	-	114	58582067	-	XOO2444	-	hypothetical protein
2203	 62.67	0	2602983..2603558	+	191	58582068	-	XOO2445	-	hypothetical protein
2204	 65.93	0	2603635..2604588	-	317	58582069	-	XOO2446	-	hypothetical protein
2205	 68.96	+1	2604677..2605549	-	290	58582070	sseA	XOO2447	-	thiosulfate sulfurtransferase
2206	 66.38	0	2605546..2606253	-	235	58582071	-	XOO2448	-	MutT/nudix family protein
2207	 64.74	0	2606492..2606647	-	51	58582073	-	XOO2450	-	peptidyl-prolyl cis-trans isomerase
2208	 62.25	0	2606786..2607193	-	135	58582074	-	XOO2451	-	peptidyl-prolyl cis-trans isomerase
2209	 64.11	0	2607354..2608136	+	260	58582075	crt	XOO2452	-	3-hydroxybutyryl-CoA dehydratase
2210	 70.97	+2	2608145..2608516	+	123	58582076	-	XOO2453	-	hypothetical protein
2211	 62.87	0	2608513..2609223	+	236	58582077	nth	XOO2454	-	endonuclease III
2212	 64.48	0	2610533..2611081	-	182	58582080	cynT	XOO2457	-	carbonic anhydrase
2213	 54.59	-2	2611552..2611998	-	148	58582082	-	XOO2459	-	transposase
2214	 62.83	0	2612805..2614055	+	416	58582083	oprO	XOO2460	-	polyphosphate-selective porin O
2215	 62.11	0	2614146..2615264	+	372	58582084	phoX	XOO2461	-	phosphate binding protein
2216	 65.00	0	2615405..2616541	+	378	58582085	pstS	XOO2462	-	ABC transporter phosphate binding protein
2217	 64.00	0	2616654..2617628	+	324	58582086	pstC	XOO2463	-	ABC transporter phosphate permease
2218	 62.76	0	2617628..2618497	+	289	58582087	pstA	XOO2464	-	ABC transporter phosphate permease
2219	 60.77	0	2618520..2619350	+	276	122879190	pstB	XOO2465	-	phosphate ABC transporter ATP-binding protein
2220	 64.35	0	2619413..2620189	+	258	58582089	phoU	XOO2466	-	phosphate regulon transcriptional regulator
2221	 63.73	0	2620322..2620729	+	135	58582090	-	XOO2467	-	hypothetical protein
2222	 63.36	0	2621013..2621648	+	211	58582091	rnt	XOO2468	-	ribonuclease T
2223	 62.33	0	2621656..2623038	+	460	58582092	-	XOO2469	-	putative ISXo8 transposase
2224	 62.38	0	2623275..2624276	-	333	122879191	-	XOO2470	-	putative transposase
2225	 61.51	0	2624369..2625571	+	400	122879192	tnpX1	XOO2471	-	IS1113 transposase
2226	 58.40	-1	2629824..2630198	+	124	58582102	-	XOO2479	-	site-specific recombinase
2227	 60.47	0	2630279..2631247	-	322	58582104	secF	XOO2481	-	preprotein translocase subunit SecF
2228	 63.63	0	2631342..2633186	-	614	58582105	secD	XOO2482	-	preprotein translocase subunit SecD
2229	 63.56	0	2633383..2633736	-	117	58582106	yajC	XOO2483	-	preprotein translocase subunit YajC
2230	 65.01	0	2633868..2635013	-	381	58582107	tgt	XOO2484	-	queuine tRNA-ribosyltransferase
2231	 67.51	+1	2635083..2636267	-	394	58582108	queA	XOO2485	-	S-adenosylmethionine:tRNA ribosyltransferase-isomerase
2232	 66.44	0	2636319..2636750	-	143	58582109	-	XOO2486	-	AsnC/Lrp family transcriptional regulator
2233	 66.27	0	2636874..2638370	+	498	58582110	-	XOO2487	-	L-lysine 6-aminotransferase
2234	 61.30	0	2638715..2639422	-	235	122879193	-	XOO2488	-	hypothetical protein
2235	 62.15	0	2639813..2640100	-	95	58582112	-	XOO2489	-	hypothetical protein
2236	 59.88	-1	2640143..2640304	-	53	58582113	-	XOO2490	-	hypothetical protein
2237	 66.67	0	2640317..2640628	-	103	58582114	-	XOO2491	-	hypothetical protein
2238	 63.46	0	2640628..2641407	+	259	58582115	-	XOO2492	-	IS1478 transposase
2239	 61.87	0	2641535..2642347	+	270	58582116	-	XOO2493	-	putative ISXo8 transposase
2240	 61.96	0	2642328..2642837	+	169	58582117	-	XOO2494	-	putative ISXo8 transposase
2241	 60.99	0	2643076..2644044	+	322	58582118	-	XOO2495	-	putative transposase
2242	 62.89	0	2644260..2644736	+	158	58582119	-	XOO2496	-	IS1478 transposase
2243	 64.21	0	2644843..2645289	-	148	58582120	-	XOO2497	-	hypothetical protein
2244	 62.59	0	2645290..2645436	-	48	58582121	-	XOO2498	-	hypothetical protein
2245	 62.83	0	2645388..2646509	-	373	58582122	phy	XOO2499	-	putative phytase precursor
2246	 61.40	0	2646506..2648746	-	746	122879194	cirA	XOO2500	-	TonB-dependent receptor
2247	 66.03	0	2649394..2650026	+	210	161898990	upp	XOO2501	-	uracil phosphoribosyltransferase
2248	 54.81	-2	2650396..2650842	+	148	58582125	-	XOO2502	-	transposase
2249	 62.89	0	2651466..2652497	+	343	58582127	-	XOO2504	-	putative transposase
2250	 65.93	0	2652504..2654258	-	584	58582128	ggt	XOO2505	-	gamma-glutamyltranspeptidase
2251	 60.86	0	2654294..2654620	-	108	58582129	-	XOO2506	-	ferredoxin
2252	 61.83	0	2654810..2655367	-	185	58582130	-	XOO2507	-	hypothetical protein
2253	 64.30	0	2655354..2655860	-	168	58582131	coaD	XOO2