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Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2087 67.19 0 2453027..2454943 + 638 58581940 edd XOO2317 - phosphogluconate dehydratase 2088 66.67 0 2455462..2455659 + 65 58581942 eda XOO2319 - KDPG and KHG aldolase 2089 63.76 0 2455880..2457256 + 458 122879171 - XOO2320 - IS1478 transposase 2090 64.21 0 2457480..2457926 - 148 58581944 - XOO2321 - hypothetical protein 2091 62.73 0 2458499..2458879 + 126 58581945 - XOO2322 - two-component system regulatory protein 2092 63.54 0 2459037..2462489 + 1150 58581946 - XOO2323 - two-component system sensor protein 2093 61.83 0 2463163..2463720 - 185 58581947 - XOO2324 - putative transposase 2094 64.71 0 2463686..2464195 - 169 58581948 - XOO2325 - putative transposase 2095 54.59 -2 2464253..2464699 + 148 58581949 - XOO2326 - transposase 2096 64.88 0 2465858..2466751 + 297 58581953 - XOO2330 - sensor histidine kinase 2097 61.54 0 2466948..2467181 - 77 121632103 - XOO4822 - hypothetical protein 2098 62.97 0 2467348..2468322 + 324 58581954 - XOO2331 - hypothetical protein 2099 63.24 0 2468597..2468917 + 106 121632104 - XOO4823 - hypothetical protein 2100 61.64 0 2469086..2470120 - 344 121632105 - XOO4824 - hypothetical protein 2101 63.65 0 2470617..2471345 - 242 58581956 - XOO2333 - ISRSO5-transposase protein 2102 63.05 0 2471584..2472801 + 405 58581957 - XOO2334 - phospholipase 2103 65.30 0 2473230..2473814 - 194 58581958 gst XOO2335 - glutathione S-transferase 2104 64.36 0 2474001..2475518 - 505 58581959 fumB XOO2336 - fumarate hydratase 2105 64.01 0 2475852..2477732 + 626 58581960 msbA XOO2337 - ABC transporter ATP-binding protein 2106 61.87 0 2477888..2478700 + 270 58581961 fpr XOO2338 - ferredoxin-NADP reductase 2107 59.67 -1 2478851..2479336 - 161 58581962 gpo XOO2339 - glutathione peroxidase-like protein 2108 61.51 0 2480880..2481752 + 290 58581964 dcp XOO2341 - peptidyl-dipeptidase 2109 71.43 +2 2482284..2482997 - 237 121632106 - XOO4825 - hypothetical protein 2110 69.12 +1 2483100..2484200 - 366 58581965 aprE XOO2342 - extracellular protease 2111 63.47 0 2484523..2485023 + 166 58581966 - XOO2343 - DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein 2112 67.47 +1 2485020..2485763 + 247 58581967 - XOO2344 - hypothetical protein 2113 56.89 -1 2485855..2486355 - 166 58581968 - XOO2345 - MarR family transcriptional regulator 2114 61.75 0 2486422..2487255 - 277 58581969 - XOO2346 - hypothetical protein 2115 61.81 0 2487306..2487593 - 95 122879172 - XOO2347 - hypothetical protein 2116 58.73 -1 2487804..2487992 + 62 58581971 - XOO2348 - hypothetical protein 2117 60.28 -1 2488409..2488972 - 187 58581972 - XOO2349 - hypothetical protein 2118 62.34 0 2489014..2489868 - 284 122879173 ygdR XOO2350 - oligopeptide transporter 2119 64.36 0 2490219..2491997 + 592 58581974 - XOO2351 - hypothetical protein 2120 65.11 0 2492069..2494315 + 748 122879174 bglS XOO2352 - beta-glucosidase 2121 63.77 0 2495152..2495289 + 45 121632107 - XOO4827 - hypothetical protein 2122 64.57 0 2495642..2497498 + 618 58581977 - XOO2354 - hypothetical protein 2123 62.96 0 2497743..2499521 - 592 58581978 sglT XOO2355 - sodium/glucose cotransport protein 2124 65.63 0 2499565..2502177 - 870 122879175 celD XOO2356 - glucan 1,4-beta-glucosidase 2125 64.69 0 2502437..2504566 + 709 58581980 phoX XOO2357 - alkaline phosphatase 2126 65.03 0 2504801..2505229 - 142 122879176 - XOO2358 - hypothetical protein 2127 67.25 0 2505428..2505772 - 114 58581982 - XOO2359 - hypothetical protein 2128 66.20 0 2505931..2507445 - 504 58581983 pgi XOO2360 - glucose-6-phosphate isomerase 2129 61.68 0 2507442..2507822 - 126 122879177 panD XOO2361 - aspartate alpha-decarboxylase 2130 66.67 0 2508001..2508843 - 280 58581986 panC XOO2363 - pantoate--beta-alanine ligase 2131 67.52 +1 2508840..2509655 - 271 58581987 panB XOO2364 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2132 70.16 +1 2509691..2510176 - 161 58581988 folK XOO2365 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine 2133 64.77 0 2510180..2511547 - 455 58581989 pcnB XOO2366 - polynucleotide adenyltransferase 2134 64.85 0 2512163..2513206 - 347 58581990 - XOO2367 - putative GTP cyclohydrolase 2135 65.91 0 2513121..2514317 - 398 58581991 amiC XOO2368 - N-acetylmuramoyl-L-alanine amidase 2136 60.54 0 2516276..2516422 + 48 58581994 nagN XOO2371 - IS1404 transposase 2137 63.91 0 2516858..2518234 - 458 122879178 - XOO2374 - IS1478 transposase 2138 66.01 0 2519066..2521801 + 911 58581998 - XOO2375 - serine protease 2139 66.11 0 2522144..2523406 + 420 58581999 czcB XOO2376 - cation efflux system protein 2140 64.70 0 2523399..2527973 + 1524 58582000 czcA XOO2377 - cation efflux system protein 2141 65.74 0 2528038..2529114 + 358 122879179 nodV XOO2378 - nodulation protein 2142 64.05 0 2529111..2529722 + 203 58582002 nodW XOO2379 - nodulation protein 2143 64.78 0 2529999..2538197 - 2732 58582003 yapH XOO2380 - YapH protein 2144 62.24 0 2538239..2539639 + 466 58582004 - XOO2381 - putative ISXo8 transposase 2145 60.99 0 2539852..2540820 - 322 58582005 - XOO2382 - putative transposase 2146 47.93 -2 2541397..2542410 + 337 58582006 - XOO2383 - hypothetical protein 2147 58.14 -1 2542522..2542650 + 42 58582007 - XOO2384 - IS1595 transposase 2148 59.09 -1 2542699..2542962 + 87 121632108 - XOO4828 - IS1404 transposase 2149 62.60 0 2542815..2543651 + 278 58582008 - XOO2385 - IS1478 transposase 2150 66.52 0 2543675..2544997 - 440 58582009 aroA XOO2386 - 3-phosphoshikimate 1-carboxyvinyltransferase 2151 61.87 0 2545119..2546327 - 402 58582010 pheA XOO2387 - P-protein 2152 64.64 0 2546376..2547461 - 361 58582011 serC XOO2388 - phosphoserine aminotransferase 2153 63.44 0 2547612..2548604 + 330 58582012 - XOO2389 - putative sulfite oxidase subunit YedY 2154 67.28 0 2549502..2550311 - 269 122879180 - XOO2391 - hypothetical protein 2155 66.30 0 2550552..2550827 + 91 58582015 - XOO2392 - hypothetical protein 2156 67.02 0 2550989..2551552 + 187 58582016 phaF XOO2393 - poly(hydroxyalcanoate) granule associated protein 2157 67.64 +1 2552194..2553120 + 308 58582017 - XOO2394 - hypothetical protein 2158 66.10 0 2553277..2553981 - 234 122879181 hutC XOO2395 - histidine utilization repressor 2159 68.44 +1 2554339..2555694 - 451 122879183 sdeB XOO2397 - N-formimino-L-glutamate deiminase 2160 67.83 +1 2555770..2556975 + 401 122879182 hutI XOO2396 - imidazolonepropionase 2161 66.61 0 2556899..2558530 + 543 58582021 hutH XOO2398 - histidine ammonia-lyase 2162 65.50 0 2558709..2559566 + 285 122879184 hutG XOO2399 - formylglutamate amidohydrolase 2163 66.07 0 2559583..2561250 + 555 122879185 hutU XOO2400 - urocanate hydratase 2164 58.08 -1 2561610..2562704 + 364 58582024 - XOO2401 - acyltransferase, putative 2165 62.07 0 2563152..2563586 + 144 122879186 - XOO2402 - hypothetical protein 2166 64.38 0 2563708..2564232 - 174 58582026 - XOO2403 - IS1404 transposase 2167 58.52 -1 2564226..2564495 - 89 58582027 - XOO2404 - IS1404 transposase 2168 62.29 0 2564622..2567318 - 898 58582029 gyrA XOO2406 - DNA gyrase subunit A 2169 68.17 +1 2567529..2568593 - 354 161898992 mtnA XOO2407 - methylthioribose-1-phosphate isomerase 2170 66.55 0 2568794..2569627 - 277 58582031 - XOO2408 - hypothetical protein 2171 66.67 0 2569590..2570552 - 320 58582032 lysS XOO2409 - lysyl-tRNA synthetase 2172 59.46 -1 2570549..2573074 - 841 122879187 ligA XOO2410 - NAD-dependent DNA ligase LigA 2173 62.41 0 2573231..2573371 + 46 58582034 hisC XOO2411 - aminotransferase 2174 64.89 0 2573930..2574661 - 243 58582035 zipA XOO2412 - cell division protein ZipA 2175 65.63 0 2574718..2578374 - 1218 58582036 smc XOO2413 - chromosome segregation protein 2176 64.22 0 2578431..2578880 - 149 58582037 rplI XOO2414 - 50S ribosomal protein L9 2177 57.58 -1 2579147..2579377 - 76 58582038 rpsR XOO2415 - 30S ribosomal protein S18 2178 61.11 0 2579389..2579820 - 143 58582039 rpsF XOO2416 - 30S ribosomal protein S6 2179 64.88 0 2580175..2580621 - 148 58582040 - XOO2417 - hypothetical protein 2180 63.30 0 2580720..2582114 + 464 58582041 asnC XOO2418 - asparaginyl-tRNA synthetase 2181 69.38 +1 2582116..2582373 + 85 58582042 - XOO2419 - hypothetical protein 2182 66.36 0 2582672..2582998 + 108 58582043 - XOO2420 - hypothetical protein 2183 64.36 0 2583336..2583638 + 100 58582045 paiB XOO2422 - transcriptional regulator protein Pai2 2184 60.50 0 2583625..2584386 + 253 58582046 yadF XOO2423 - carbonic anhydrase 2185 59.22 -1 2584442..2585005 + 187 58582047 haaO XOO2424 - 3-hydroxyanthranilate 3,4-dioxygenase 2186 69.75 +1 2585018..2585665 + 215 58582048 - XOO2425 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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