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Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2052 54.59 -2 2405806..2406252 + 148 58581900 - XOO2277 - transposase 2053 65.40 0 2407066..2411565 + 1499 58581902 - XOO2279 - avirulence protein 2054 66.52 0 2411957..2412628 + 223 58581903 - XOO2280 - transposase 2055 62.85 0 2412650..2412937 + 95 58581904 tra8 XOO2281 - IS163, transposase 2056 66.67 0 2413019..2413243 + 74 58581905 - XOO2282 - transposase 2057 62.33 0 2413883..2414851 - 322 58581906 - XOO2283 - transposase 2058 61.30 0 2415254..2416222 - 322 58581907 - XOO2284 - putative transposase 2059 62.93 0 2416316..2417332 + 338 58581908 - XOO2285 - transposase 2060 63.33 0 2417310..2421419 - 1369 58581909 - XOO2286 - RhsD protein 2061 57.72 -1 2424994..2425686 + 230 58581913 - XOO2290 - hypothetical protein 2062 60.35 0 2426161..2426793 - 210 58581914 pgsA XOO2291 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase 2063 64.78 0 2426793..2428649 - 618 58581915 uvrC XOO2292 - excinuclease ABC subunit C 2064 66.67 0 2428646..2430064 - 472 58581916 - XOO2293 - hypothetical protein 2065 67.96 +1 2430088..2430552 - 154 58581917 - XOO2294 - low molecular weight phosphotyrosine protein phosphatase 2066 68.08 +1 2430549..2431328 - 259 58581918 kdsB XOO2295 - 3-deoxy-manno-octulosonate cytidylyltransferase 2067 67.34 +1 2431620..2432660 - 346 58581919 lpxK XOO2296 - tetraacyldisaccharide 4'-kinase 2068 63.05 0 2432657..2434426 - 589 58581920 msbA XOO2297 - ABC transporter ATP-binding protein 2069 63.66 0 2434423..2434887 - 154 58581921 exbD XOO2298 - biopolymer transport protein 2070 64.37 0 2434891..2435631 - 246 58581922 exbB XOO2299 - biopolymer transport protein 2071 67.00 0 2435582..2438005 - 807 58581923 comA XOO2300 - competence protein 2072 63.13 0 2438193..2439209 + 338 58581924 - XOO2301 - transposase 2073 58.17 -1 2439222..2439527 + 101 58581925 - XOO2302 - hypothetical protein 2074 63.17 0 2439630..2440430 + 266 58581926 - XOO2303 - hypothetical protein 2075 62.99 0 2440603..2441337 - 244 58581927 ycfV XOO2304 - ABC transporter ATP-binding protein 2076 61.95 0 2441330..2442580 - 416 58581928 lolC XOO2305 - lipoprotein releasing system transmembrane protein 2077 62.96 0 2442998..2443321 - 107 58581929 - XOO2306 - hypothetical protein 2078 61.30 0 2443357..2444139 - 260 58581930 sdhB XOO2307 - succinate dehydrogenase iron-sulfur subunit 2079 62.32 0 2444156..2444293 - 45 121632102 - XOO4821 - hypothetical protein 2080 62.93 0 2444369..2446159 - 596 58581931 sdhA XOO2308 - succinate dehydrogenase flavoprotein subunit 2081 62.27 0 2446194..2446580 - 128 58581932 sdhD XOO2309 - succinate dehydrogenase membrane anchor subunit 2082 61.36 0 2446577..2446972 - 131 58581933 sdhC XOO2310 - succinate dehydrogenase membrane anchor subunit 2083 64.57 0 2448243..2449340 - 365 58581936 ugpC XOO2313 - sugar ABC transporter ATP-binding protein 2084 66.79 0 2449630..2451204 + 524 58581937 zwf XOO2314 - glucose-6-phosphate 1-dehydrogenase 2085 66.87 0 2451201..2452208 + 335 58581938 glk XOO2315 - glucokinase 2086 66.67 0 2452205..2452924 + 239 58581939 pgl XOO2316 - 6-phosphogluconolactonase 2087 67.19 0 2453027..2454943 + 638 58581940 edd XOO2317 - phosphogluconate dehydratase 2088 66.67 0 2455462..2455659 + 65 58581942 eda XOO2319 - KDPG and KHG aldolase 2089 63.76 0 2455880..2457256 + 458 122879171 - XOO2320 - IS1478 transposase 2090 64.21 0 2457480..2457926 - 148 58581944 - XOO2321 - hypothetical protein 2091 62.73 0 2458499..2458879 + 126 58581945 - XOO2322 - two-component system regulatory protein 2092 63.54 0 2459037..2462489 + 1150 58581946 - XOO2323 - two-component system sensor protein 2093 61.83 0 2463163..2463720 - 185 58581947 - XOO2324 - putative transposase 2094 64.71 0 2463686..2464195 - 169 58581948 - XOO2325 - putative transposase 2095 54.59 -2 2464253..2464699 + 148 58581949 - XOO2326 - transposase 2096 64.88 0 2465858..2466751 + 297 58581953 - XOO2330 - sensor histidine kinase 2097 61.54 0 2466948..2467181 - 77 121632103 - XOO4822 - hypothetical protein 2098 62.97 0 2467348..2468322 + 324 58581954 - XOO2331 - hypothetical protein 2099 63.24 0 2468597..2468917 + 106 121632104 - XOO4823 - hypothetical protein 2100 61.64 0 2469086..2470120 - 344 121632105 - XOO4824 - hypothetical protein 2101 63.65 0 2470617..2471345 - 242 58581956 - XOO2333 - ISRSO5-transposase protein 2102 63.05 0 2471584..2472801 + 405 58581957 - XOO2334 - phospholipase 2103 65.30 0 2473230..2473814 - 194 58581958 gst XOO2335 - glutathione S-transferase 2104 64.36 0 2474001..2475518 - 505 58581959 fumB XOO2336 - fumarate hydratase 2105 64.01 0 2475852..2477732 + 626 58581960 msbA XOO2337 - ABC transporter ATP-binding protein 2106 61.87 0 2477888..2478700 + 270 58581961 fpr XOO2338 - ferredoxin-NADP reductase 2107 59.67 -1 2478851..2479336 - 161 58581962 gpo XOO2339 - glutathione peroxidase-like protein 2108 61.51 0 2480880..2481752 + 290 58581964 dcp XOO2341 - peptidyl-dipeptidase 2109 71.43 +2 2482284..2482997 - 237 121632106 - XOO4825 - hypothetical protein 2110 69.12 +1 2483100..2484200 - 366 58581965 aprE XOO2342 - extracellular protease 2111 63.47 0 2484523..2485023 + 166 58581966 - XOO2343 - DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein 2112 67.47 +1 2485020..2485763 + 247 58581967 - XOO2344 - hypothetical protein 2113 56.89 -1 2485855..2486355 - 166 58581968 - XOO2345 - MarR family transcriptional regulator 2114 61.75 0 2486422..2487255 - 277 58581969 - XOO2346 - hypothetical protein 2115 61.81 0 2487306..2487593 - 95 122879172 - XOO2347 - hypothetical protein 2116 58.73 -1 2487804..2487992 + 62 58581971 - XOO2348 - hypothetical protein 2117 60.28 -1 2488409..2488972 - 187 58581972 - XOO2349 - hypothetical protein 2118 62.34 0 2489014..2489868 - 284 122879173 ygdR XOO2350 - oligopeptide transporter 2119 64.36 0 2490219..2491997 + 592 58581974 - XOO2351 - hypothetical protein 2120 65.11 0 2492069..2494315 + 748 122879174 bglS XOO2352 - beta-glucosidase 2121 63.77 0 2495152..2495289 + 45 121632107 - XOO4827 - hypothetical protein 2122 64.57 0 2495642..2497498 + 618 58581977 - XOO2354 - hypothetical protein 2123 62.96 0 2497743..2499521 - 592 58581978 sglT XOO2355 - sodium/glucose cotransport protein 2124 65.63 0 2499565..2502177 - 870 122879175 celD XOO2356 - glucan 1,4-beta-glucosidase 2125 64.69 0 2502437..2504566 + 709 58581980 phoX XOO2357 - alkaline phosphatase 2126 65.03 0 2504801..2505229 - 142 122879176 - XOO2358 - hypothetical protein 2127 67.25 0 2505428..2505772 - 114 58581982 - XOO2359 - hypothetical protein 2128 66.20 0 2505931..2507445 - 504 58581983 pgi XOO2360 - glucose-6-phosphate isomerase 2129 61.68 0 2507442..2507822 - 126 122879177 panD XOO2361 - aspartate alpha-decarboxylase 2130 66.67 0 2508001..2508843 - 280 58581986 panC XOO2363 - pantoate--beta-alanine ligase 2131 67.52 +1 2508840..2509655 - 271 58581987 panB XOO2364 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2132 70.16 +1 2509691..2510176 - 161 58581988 folK XOO2365 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine 2133 64.77 0 2510180..2511547 - 455 58581989 pcnB XOO2366 - polynucleotide adenyltransferase 2134 64.85 0 2512163..2513206 - 347 58581990 - XOO2367 - putative GTP cyclohydrolase 2135 65.91 0 2513121..2514317 - 398 58581991 amiC XOO2368 - N-acetylmuramoyl-L-alanine amidase 2136 60.54 0 2516276..2516422 + 48 58581994 nagN XOO2371 - IS1404 transposase 2137 63.91 0 2516858..2518234 - 458 122879178 - XOO2374 - IS1478 transposase 2138 66.01 0 2519066..2521801 + 911 58581998 - XOO2375 - serine protease 2139 66.11 0 2522144..2523406 + 420 58581999 czcB XOO2376 - cation efflux system protein 2140 64.70 0 2523399..2527973 + 1524 58582000 czcA XOO2377 - cation efflux system protein 2141 65.74 0 2528038..2529114 + 358 122879179 nodV XOO2378 - nodulation protein 2142 64.05 0 2529111..2529722 + 203 58582002 nodW XOO2379 - nodulation protein 2143 64.78 0 2529999..2538197 - 2732 58582003 yapH XOO2380 - YapH protein 2144 62.24 0 2538239..2539639 + 466 58582004 - XOO2381 - putative ISXo8 transposase 2145 60.99 0 2539852..2540820 - 322 58582005 - XOO2382 - putative transposase 2146 47.93 -2 2541397..2542410 + 337 58582006 - XOO2383 - hypothetical protein 2147 58.14 -1 2542522..2542650 + 42 58582007 - XOO2384 - IS1595 transposase 2148 59.09 -1 2542699..2542962 + 87 121632108 - XOO4828 - IS1404 transposase 2149 62.60 0 2542815..2543651 + 278 58582008 - XOO2385 - IS1478 transposase 2150 66.52 0 2543675..2544997 - 440 58582009 aroA XOO2386 - 3-phosphoshikimate 1-carboxyvinyltransferase 2151 61.87 0 2545119..2546327 - 402 58582010 pheA XOO2387 - P-protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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