version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2002 65.64 0 2332753..2334021 + 422 58581843 phaE XOO2220 - PHA synthase subunit 2003 61.28 0 2334018..2335094 + 358 58581844 phbC XOO2221 - poly (3-hydroxybutyric acid) synthase 2004 59.60 -1 2335209..2335406 + 65 58581845 - XOO2222 - hypothetical protein 2005 64.52 0 2335849..2337060 - 403 122879166 - XOO2223 - oxidoreductase 2006 58.70 -1 2337136..2337474 + 112 58581847 - XOO2224 - hypothetical protein 2007 64.63 0 2337577..2339937 + 786 58581848 tex XOO2225 - transcription-related protein 2008 63.17 0 2340149..2341207 + 352 58581849 - XOO2226 - putative transposase 2009 65.96 0 2341259..2341825 - 188 58581850 regR XOO2227 - two-component system regulatory protein 2010 67.36 +1 2341822..2343123 - 433 58581851 regS XOO2228 - two-component system sensor protein 2011 65.17 0 2343169..2344434 + 421 58581852 ispG XOO2229 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2012 65.31 0 2344415..2345152 + 245 58581853 - XOO2230 - phosphatidylglycerophosphatase B-related protein 2013 63.66 0 2345293..2346456 - 387 58581854 proP XOO2231 - Prop transport protein 2014 62.44 0 2346607..2347575 + 322 58581855 - XOO2232 - hypothetical protein 2015 58.54 -1 2348049..2348417 - 122 58581856 ygeA XOO2233 - putative resistance protein 2016 64.83 0 2348460..2349221 - 253 58581858 - XOO2235 - integral membrane protein 2017 64.91 0 2349365..2350387 - 340 58581859 murB XOO2236 - UDP-N-acetylenolpyruvoylglucosamine reductase 2018 66.00 0 2350415..2351470 - 351 58581860 pyrD XOO2237 - dihydroorotate dehydrogenase 2 2019 64.99 0 2351476..2352249 - 257 58581861 - XOO2238 - hypothetical protein 2020 63.47 0 2352246..2352620 - 124 58581862 - XOO2239 - hypothetical protein 2021 64.12 0 2353119..2354651 - 510 122879167 - XOO2240 - aldehyde dehydrogenase 2022 65.29 0 2354985..2355275 + 96 58581864 tspO XOO2241 - tryptophan-rich sensory protein 2023 65.56 0 2355922..2358462 + 846 58581865 metL XOO2242 - bifunctional aspartokinase I/homeserine dehydrogenase I 2024 68.63 +1 2358459..2359427 + 322 58581866 thrB XOO2243 - homoserine kinase 2025 63.11 0 2360431..2361639 + 402 58581868 - XOO2245 - tannase precursor 2026 65.28 0 2362363..2362722 - 119 58581869 - XOO2246 - hypothetical protein 2027 68.58 +1 2362839..2364143 + 434 58581870 thrC XOO2247 - threonine synthase 2028 67.03 0 2364168..2364989 + 273 58581871 - XOO2248 - hypothetical protein 2029 65.33 0 2366098..2367666 + 522 58581874 hisS XOO2251 - histidyl-tRNA synthetase 2030 58.92 -1 2368183..2368647 - 154 58581875 - XOO2252 - putative transposase 2031 58.33 -1 2368613..2368984 - 123 58581876 - XOO2253 - putative transposase 2032 70.64 +1 2369283..2369609 + 108 122879168 - XOO2254 - hypothetical protein 2033 67.10 0 2369619..2370533 + 304 58581878 hisG XOO2255 - ATP phosphoribosyltransferase 2034 66.36 0 2370530..2371825 + 431 58581879 hisD XOO2256 - histidinol dehydrogenase 2035 65.81 0 2371744..2372913 + 389 58581880 hisC XOO2257 - histidinol-phosphate aminotransferase 2036 63.03 0 2372910..2374037 + 375 58581881 hisB XOO2258 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2037 64.18 0 2374034..2374636 + 200 58581882 hisH XOO2259 - imidazole glycerol phosphate synthase subunit HisH 2038 66.26 0 2374633..2375367 + 244 58581883 hisA XOO2260 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2039 62.93 0 2375361..2376137 + 258 161898993 hisF XOO2261 - imidazole glycerol phosphate synthase subunit HisF 2040 64.09 0 2376127..2376747 + 206 58581885 hisI XOO2262 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 2041 63.48 0 2376838..2377245 + 135 58581886 - XOO2263 - hypothetical protein 2042 65.84 0 2377335..2380850 - 1171 58581887 - XOO2264 - hypothetical protein 2043 59.36 -1 2381302..2382081 - 259 58581888 - XOO2265 - pectate lyase L precursor 2044 59.68 -1 2383499..2384572 + 357 58581889 - XOO2266 - putative phage replication protein RstA 2045 54.42 -2 2385734..2387170 + 478 122879169 - XOO2267 - hypothetical protein 2046 56.79 -2 2387489..2388673 + 394 58581891 - XOO2268 - hypothetical protein 2047 54.59 -2 2394478..2394924 + 148 58581894 - XOO2271 - transposase 2048 57.40 -1 2394690..2395250 + 186 122879170 - XOO2272 - transposase 2049 56.13 -2 2395719..2396126 - 135 58581896 - XOO2273 - transposase 2050 66.89 0 2396490..2400998 + 1502 58581898 pthA4 XOO2275 - avirulence protein 2051 66.64 0 2401778..2405743 + 1321 58581899 - XOO2276 - hypothetical protein 2052 54.59 -2 2405806..2406252 + 148 58581900 - XOO2277 - transposase 2053 65.40 0 2407066..2411565 + 1499 58581902 - XOO2279 - avirulence protein 2054 66.52 0 2411957..2412628 + 223 58581903 - XOO2280 - transposase 2055 62.85 0 2412650..2412937 + 95 58581904 tra8 XOO2281 - IS163, transposase 2056 66.67 0 2413019..2413243 + 74 58581905 - XOO2282 - transposase 2057 62.33 0 2413883..2414851 - 322 58581906 - XOO2283 - transposase 2058 61.30 0 2415254..2416222 - 322 58581907 - XOO2284 - putative transposase 2059 62.93 0 2416316..2417332 + 338 58581908 - XOO2285 - transposase 2060 63.33 0 2417310..2421419 - 1369 58581909 - XOO2286 - RhsD protein 2061 57.72 -1 2424994..2425686 + 230 58581913 - XOO2290 - hypothetical protein 2062 60.35 0 2426161..2426793 - 210 58581914 pgsA XOO2291 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase 2063 64.78 0 2426793..2428649 - 618 58581915 uvrC XOO2292 - excinuclease ABC subunit C 2064 66.67 0 2428646..2430064 - 472 58581916 - XOO2293 - hypothetical protein 2065 67.96 +1 2430088..2430552 - 154 58581917 - XOO2294 - low molecular weight phosphotyrosine protein phosphatase 2066 68.08 +1 2430549..2431328 - 259 58581918 kdsB XOO2295 - 3-deoxy-manno-octulosonate cytidylyltransferase 2067 67.34 +1 2431620..2432660 - 346 58581919 lpxK XOO2296 - tetraacyldisaccharide 4'-kinase 2068 63.05 0 2432657..2434426 - 589 58581920 msbA XOO2297 - ABC transporter ATP-binding protein 2069 63.66 0 2434423..2434887 - 154 58581921 exbD XOO2298 - biopolymer transport protein 2070 64.37 0 2434891..2435631 - 246 58581922 exbB XOO2299 - biopolymer transport protein 2071 67.00 0 2435582..2438005 - 807 58581923 comA XOO2300 - competence protein 2072 63.13 0 2438193..2439209 + 338 58581924 - XOO2301 - transposase 2073 58.17 -1 2439222..2439527 + 101 58581925 - XOO2302 - hypothetical protein 2074 63.17 0 2439630..2440430 + 266 58581926 - XOO2303 - hypothetical protein 2075 62.99 0 2440603..2441337 - 244 58581927 ycfV XOO2304 - ABC transporter ATP-binding protein 2076 61.95 0 2441330..2442580 - 416 58581928 lolC XOO2305 - lipoprotein releasing system transmembrane protein 2077 62.96 0 2442998..2443321 - 107 58581929 - XOO2306 - hypothetical protein 2078 61.30 0 2443357..2444139 - 260 58581930 sdhB XOO2307 - succinate dehydrogenase iron-sulfur subunit 2079 62.32 0 2444156..2444293 - 45 121632102 - XOO4821 - hypothetical protein 2080 62.93 0 2444369..2446159 - 596 58581931 sdhA XOO2308 - succinate dehydrogenase flavoprotein subunit 2081 62.27 0 2446194..2446580 - 128 58581932 sdhD XOO2309 - succinate dehydrogenase membrane anchor subunit 2082 61.36 0 2446577..2446972 - 131 58581933 sdhC XOO2310 - succinate dehydrogenase membrane anchor subunit 2083 64.57 0 2448243..2449340 - 365 58581936 ugpC XOO2313 - sugar ABC transporter ATP-binding protein 2084 66.79 0 2449630..2451204 + 524 58581937 zwf XOO2314 - glucose-6-phosphate 1-dehydrogenase 2085 66.87 0 2451201..2452208 + 335 58581938 glk XOO2315 - glucokinase 2086 66.67 0 2452205..2452924 + 239 58581939 pgl XOO2316 - 6-phosphogluconolactonase 2087 67.19 0 2453027..2454943 + 638 58581940 edd XOO2317 - phosphogluconate dehydratase 2088 66.67 0 2455462..2455659 + 65 58581942 eda XOO2319 - KDPG and KHG aldolase 2089 63.76 0 2455880..2457256 + 458 122879171 - XOO2320 - IS1478 transposase 2090 64.21 0 2457480..2457926 - 148 58581944 - XOO2321 - hypothetical protein 2091 62.73 0 2458499..2458879 + 126 58581945 - XOO2322 - two-component system regulatory protein 2092 63.54 0 2459037..2462489 + 1150 58581946 - XOO2323 - two-component system sensor protein 2093 61.83 0 2463163..2463720 - 185 58581947 - XOO2324 - putative transposase 2094 64.71 0 2463686..2464195 - 169 58581948 - XOO2325 - putative transposase 2095 54.59 -2 2464253..2464699 + 148 58581949 - XOO2326 - transposase 2096 64.88 0 2465858..2466751 + 297 58581953 - XOO2330 - sensor histidine kinase 2097 61.54 0 2466948..2467181 - 77 121632103 - XOO4822 - hypothetical protein 2098 62.97 0 2467348..2468322 + 324 58581954 - XOO2331 - hypothetical protein 2099 63.24 0 2468597..2468917 + 106 121632104 - XOO4823 - hypothetical protein 2100 61.64 0 2469086..2470120 - 344 121632105 - XOO4824 - hypothetical protein 2101 63.65 0 2470617..2471345 - 242 58581956 - XOO2333 - ISRSO5-transposase protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.