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Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1673 65.56 0 1958230..1959129 + 299 58581479 era XOO1856 - GTP-binding protein Era 1674 64.87 0 1959353..1960075 + 240 58581480 recO XOO1857 - DNA repair protein RecO 1675 65.42 0 1960224..1960946 - 240 58581481 - XOO1858 - hypothetical protein 1676 64.72 0 1961000..1962439 + 479 58581482 rumA XOO1859 - 23S rRNA 5-methyluridine methyltransferase 1677 60.04 -1 1962614..1963111 + 165 58581483 - XOO1860 - hypothetical protein 1678 63.35 0 1963207..1964442 - 411 58581484 - XOO1861 - transposase 1679 62.89 0 1964671..1966047 + 458 122879140 - XOO1863 - IS1478 transposase 1680 65.88 0 1966092..1966850 + 252 58581487 frnE XOO1864 - polyketide synthase 1681 65.20 0 1966810..1967901 + 363 58581488 - XOO1865 - hypothetical protein 1682 64.83 0 1968082..1969659 + 525 58581489 - XOO1866 - hypothetical protein 1683 67.86 +1 1969695..1970780 + 361 58581490 nagZ XOO1867 - beta-hexosaminidase 1684 66.31 0 1970780..1971334 + 184 58581491 hpt XOO1868 - hypoxanthine-guanine phosphoribosyltransferase 1685 63.55 0 1971402..1972172 + 256 58581492 deoD XOO1869 - 5'-methylthioadenosine phosphorylase 1686 59.65 -1 1972238..1972465 + 75 58581493 scoF XOO1870 - cold shock protein 1687 67.60 +1 1974000..1974644 - 214 58581496 - XOO1873 - hypothetical protein 1688 66.79 0 1974634..1977135 - 833 58581497 lhr2 XOO1874 - helicase-related protein 1689 66.67 0 1977132..1978736 - 534 161899000 lig2 XOO1875 - ATP-dependent DNA ligase 1690 72.22 +2 1978733..1978966 - 77 121632089 - XOO4790 - hypothetical protein 1691 66.03 0 1978963..1980057 - 364 58581499 - XOO1876 - mRNA 3'-end processing factor 1692 68.58 +1 1980322..1980687 - 121 58581500 - XOO1877 - hypothetical protein 1693 65.72 0 1980684..1981319 - 211 58581501 - XOO1878 - hypothetical protein 1694 66.26 0 1981372..1983081 - 569 58581502 - XOO1879 - sensor histidine kinase 1695 69.11 +1 1983190..1983516 - 108 58581503 - XOO1880 - hypothetical protein 1696 64.29 0 1984213..1985388 - 391 58581504 atoB XOO1881 - acetoacetyl-CoA thiolase 1697 64.83 0 1985544..1988372 + 942 58581505 - XOO1882 - serine protease 1698 63.49 0 1988433..1989533 - 366 58581506 leu XOO1883 - leucine dehydrogenase 1699 61.14 0 1990001..1990561 - 186 58581507 - XOO1884 - hypothetical protein 1700 55.17 -2 1990930..1991103 + 57 58581508 - XOO1885 - hypothetical protein 1701 60.39 0 1991264..1991518 - 84 58581509 - XOO1886 - hypothetical protein 1702 64.79 0 1991693..1991959 + 88 58581510 - XOO1887 - hypothetical protein 1703 58.74 -1 1992150..1992818 - 222 58581511 - XOO1888 - hypothetical protein 1704 62.73 0 1992892..1993881 + 329 58581512 - XOO1889 - ISxac1 transposase 1705 63.68 0 1993882..1994115 + 77 58581513 - XOO1890 - ISxac1 transposase 1706 62.26 0 1994141..1995523 + 460 122879141 - XOO1891 - putative ISXo8 transposase 1707 62.90 0 1995916..1996101 - 61 121632090 - XOO4791 - hypothetical protein 1708 66.31 0 1996291..1997697 - 468 58581515 yegD XOO1892 - heat shock protein 1709 58.33 -1 1998184..1998279 - 31 58581517 slyD XOO1894 - peptidyl-prolyl cis-trans isomerase 1710 63.11 0 1998455..1999690 - 411 58581518 - XOO1895 - transposase 1711 62.92 0 1999938..2000870 - 310 58581520 catA XOO1897 - cation transport protein 1712 61.57 0 2000928..2001437 + 169 58581521 - XOO1898 - hypothetical protein 1713 64.94 0 2001726..2002649 - 307 58581522 - XOO1899 - hypothetical protein 1714 65.47 0 2002907..2004247 - 446 58581523 nerA XOO1900 - GTN reductase 1715 64.60 0 2004246..2005457 + 403 58581524 araJ XOO1901 - MFS transporter 1716 62.72 0 2006020..2006475 + 151 58581525 - XOO1902 - hypothetical protein 1717 63.58 0 2006608..2007351 + 247 58581526 - XOO1903 - hypothetical protein 1718 68.14 +1 2007387..2007995 + 202 58581527 - XOO1904 - hypothetical protein 1719 67.18 0 2008055..2008249 + 64 58581528 - XOO1905 - hypothetical protein 1720 67.10 0 2008319..2009689 + 456 122879142 acvB XOO1906 - virulence protein 1721 67.41 +1 2010313..2012877 - 854 122879143 - XOO1907 - hypothetical protein 1722 68.03 +1 2012946..2013311 + 121 58581531 - XOO1908 - hypothetical protein 1723 67.03 0 2013290..2013847 + 185 58581532 - XOO1909 - hypothetical protein 1724 62.73 0 2013825..2014205 + 126 58581533 - XOO1910 - hypothetical protein 1725 64.89 0 2014368..2015438 - 356 58581534 - XOO1911 - hypothetical protein 1726 66.92 0 2015456..2016238 - 260 58581535 - XOO1912 - hypothetical protein 1727 65.75 0 2016235..2016780 - 181 58581536 - XOO1913 - hypothetical protein 1728 63.50 0 2016777..2018072 - 431 122879144 cfaA XOO1914 - cyclopropane-fatty-acyl-phospholipid synthase 1729 65.52 0 2018069..2019028 - 319 58581538 - XOO1915 - hypothetical protein 1730 64.85 0 2018953..2020275 - 440 58581539 - XOO1916 - dehydrogenase 1731 64.75 0 2020200..2021348 - 382 58581540 desC XOO1917 - delta 9 acyl-lipid fatty acid desaturase 1732 67.61 +1 2021424..2022269 - 281 58581541 - XOO1918 - hypothetical protein 1733 65.25 0 2022254..2022817 - 187 122879145 rpoE XOO1919 - RNA polymerase sigma factor 1734 60.16 -1 2022876..2023244 - 122 58581543 - XOO1920 - hypothetical protein 1735 67.31 0 2023330..2024112 - 260 58581544 - XOO1921 - hypothetical protein 1736 67.30 0 2024731..2025201 - 156 58581545 ydgM XOO1922 - ferredoxin 1737 63.69 0 2025161..2025832 - 223 58581546 - XOO1923 - hypothetical protein 1738 65.23 0 2025972..2028056 - 694 58581547 metG XOO1924 - methionyl-tRNA synthetase 1739 65.62 0 2028281..2028760 - 159 58581548 - XOO1925 - hypothetical protein 1740 63.27 0 2029494..2030552 + 352 58581551 - XOO1928 - putative transposase 1741 63.81 0 2030824..2032221 + 465 161898999 ykfD XOO1929 - S-methylmethionine transporter 1742 64.62 0 2032218..2033195 + 325 161898998 mmuM XOO1930 - homocysteine methyltransferase 1743 65.38 0 2033377..2035314 - 645 122879146 - XOO1931 - hypothetical protein 1744 63.45 0 2035735..2036511 - 258 58581555 - XOO1932 - hypothetical protein 1745 63.41 0 2036516..2037190 - 224 122879147 - XOO1933 - hypothetical protein 1746 64.81 0 2037424..2038932 + 502 58581557 - XOO1934 - hypothetical protein 1747 63.06 0 2039213..2040211 + 332 58581560 - XOO1937 - IS1478 transposase 1748 71.86 +2 2044464..2044694 - 76 58581566 nodQ XOO1943 - ATP sulfurylase/adenylylsulfate kinase 1749 62.55 0 2046339..2046800 + 153 58581572 - XOO1949 - transposase 1750 67.79 +1 2046801..2047247 - 148 58581573 - XOO1950 - IS1478 transposase 1751 64.01 0 2047266..2047829 - 187 58581574 - XOO1951 - hypothetical protein 1752 63.55 0 2048302..2049618 - 438 122879148 - XOO1952 - PHB depolymerase 1753 67.64 +1 2049786..2050403 - 205 58581576 - XOO1953 - hypothetical protein 1754 63.70 0 2050369..2050908 + 179 58581577 - XOO1954 - hypothetical protein 1755 67.93 +1 2052074..2053417 - 447 58581579 - XOO1956 - hypothetical protein 1756 66.60 0 2053354..2054766 - 470 58581580 - XOO1957 - hypothetical protein 1757 66.94 0 2054763..2055500 - 245 58581581 - XOO1958 - ABC transporter ATP-binding protein 1758 65.06 0 2055500..2057680 - 726 58581582 - XOO1959 - Outer membrane receptor proteins, mostly Fe transport 1759 66.44 0 2058089..2058535 + 148 58581583 - XOO1960 - IS1478 transposase 1760 65.62 0 2058520..2059479 - 319 58581584 accA XOO1961 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 1761 65.55 0 2059655..2063245 - 1196 122879149 dnaE XOO1962 - DNA polymerase III subunit alpha 1762 66.53 0 2063703..2064461 - 252 58581586 rnhB XOO1963 - ribonuclease HII 1763 65.74 0 2064440..2065738 - 432 58581587 lpxB XOO1964 - lipid-A-disaccharide synthase 1764 65.28 0 2065735..2066526 - 263 58581588 lpxA XOO1965 - UDP-N-acetylglucosamine acyltransferase 1765 60.82 0 2066550..2067011 - 153 58581589 fabZ XOO1966 - (3R)-hydroxymyristoyl-ACP dehydratase 1766 66.17 0 2067008..2068021 - 337 58581590 lpxD XOO1967 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1767 61.74 0 2068421..2070874 - 817 58581591 oma XOO1968 - outer membrane antigen 1768 65.78 0 2070871..2072217 - 448 58581592 - XOO1969 - hypothetical protein 1769 69.10 +1 2072244..2073434 - 396 58581593 dxr XOO1970 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1770 66.67 0 2073437..2074264 - 275 58581594 cdsA XOO1971 - phosphatidate cytidylyltransferase 1771 67.18 0 2074261..2075037 - 258 58581595 uppS XOO1972 - undecaprenyl pyrophosphate synthetase 1772 61.29 0 2075040..2075597 - 185 58581596 frr XOO1973 - ribosome recycling factor 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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