version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1626 58.49 -1 1899143..1902052 - 969 58581428 - XOO1805 - hypothetical protein 1627 65.63 0 1902300..1903169 - 289 58581429 - XOO1806 - hypothetical protein 1628 65.71 0 1903290..1904333 - 347 58581430 - XOO1807 - heat shock protein 1629 64.23 0 1904255..1904992 + 245 121632086 mtgA XOO4787 - monofunctional biosynthetic peptidoglycan transglycosylase 1630 63.41 0 1904935..1906041 + 368 58581432 gtrB XOO1809 - glucosyl transferase 1631 58.59 -1 1906001..1906099 + 32 121632087 - XOO4788 - hypothetical protein 1632 62.22 0 1906115..1906429 + 104 58581433 - XOO1810 - hypothetical protein 1633 66.01 0 1907732..1907884 - 50 58581436 - XOO1813 - hypothetical protein 1634 60.62 0 1907913..1908557 - 214 58581437 hly3 XOO1814 - hemolysin III 1635 63.93 0 1908633..1910237 - 534 58581438 prfC XOO1815 - peptide chain release factor 3 1636 69.82 +1 1910370..1911257 - 295 122879135 - XOO1816 - hypothetical protein 1637 65.88 0 1911471..1912619 + 382 58581440 metA XOO1817 - homoserine O-acetyltransferase 1638 64.20 0 1912616..1913833 + 405 58581441 metB XOO1818 - cystathionine gamma-synthase 1639 65.48 0 1914251..1914925 + 224 122879136 - XOO1820 - homoserine dehydrogenase 1640 64.06 0 1915599..1916981 - 460 122879137 sdaA XOO1821 - L-serine dehydratase 1641 67.47 +1 1917054..1917302 + 82 58581445 - XOO1822 - hypothetical protein 1642 65.64 0 1917388..1917777 - 129 58581446 - XOO1823 - cold shock domain-containing protein 1643 64.39 0 1918102..1918671 - 189 58581447 - XOO1824 - hypothetical protein 1644 64.01 0 1918681..1919244 - 187 58581448 yodB XOO1825 - cytochrome B561 1645 68.17 +1 1919241..1919903 - 220 58581449 - XOO1826 - hypothetical protein 1646 64.02 0 1919943..1923575 + 1210 58581450 - XOO1827 - histidine kinase-response regulator hybrid protein 1647 64.20 0 1923865..1927428 + 1187 122879138 - XOO1828 - histidine kinase/response regulator hybrid protein 1648 57.96 -1 1927425..1930031 + 868 58581452 - XOO1829 - histidine kinase-response regulator hybrid protein 1649 61.20 0 1930083..1931051 + 322 58581453 - XOO1830 - putative transposase 1650 62.57 0 1931162..1932235 + 357 58581454 - XOO1831 - histidine kinase-response regulator hybrid protein 1651 62.07 0 1932260..1932433 - 57 121632088 emrA XOO4789 - MFS transporter 1652 55.24 -2 1932551..1932655 + 34 58581455 tnp XOO1832 - transposase 1653 61.33 0 1932855..1933154 + 99 58581456 - XOO1833 - hypothetical protein 1654 68.92 +1 1933339..1933560 - 73 58581457 - XOO1834 - ISxac3 transposase 1655 66.56 0 1933766..1935697 + 643 58581458 - XOO1835 - hypothetical protein 1656 63.66 0 1935819..1936217 + 132 58581459 - XOO1836 - hypothetical protein 1657 64.05 0 1937238..1938230 - 330 58581461 bga XOO1838 - beta-galactosidase 1658 67.03 0 1940077..1941462 - 461 122879139 - XOO1841 - transcriptional regulator 1659 65.21 0 1941601..1943106 + 501 58581465 mmsA XOO1842 - methylmalonate-semialdehyde dehydrogenase 1660 64.30 0 1943075..1944298 + 407 58581466 fadE9 XOO1843 - acyl-CoA dehydrogenase 1661 63.91 0 1944295..1945092 + 265 58581467 paaF XOO1844 - enoyl-CoA hydratase 1662 65.56 0 1945092..1946264 + 390 58581468 - XOO1845 - enoyl-CoA hydratase 1663 65.81 0 1946388..1947326 + 312 58581469 mmsB XOO1846 - 3-hydroxyisobutirate dehydrogenase 1664 65.56 0 1947535..1948530 + 331 58581470 czcD XOO1847 - cobalt-zinc-cadmium resistance protein 1665 66.91 0 1948747..1950828 - 693 58581471 fadB XOO1848 - 3-hydroxyacyl-CoA dehydrogenase 1666 62.15 0 1950933..1951685 + 250 58581472 algU XOO1849 - RNA polymerase sigma factor RpoE 1667 70.78 +1 1951682..1952581 + 299 58581473 - XOO1850 - regulatory protein 1668 67.34 +1 1952508..1954277 + 589 58581474 mucD XOO1851 - periplasmic protease 1669 62.24 0 1954443..1956248 + 601 58581475 lepA XOO1852 - GTP-binding protein LepA 1670 58.80 -1 1956355..1957155 + 266 58581476 lepB XOO1853 - signal peptidase I 1671 54.23 -2 1957186..1957563 + 125 58581477 - XOO1854 - hypothetical protein 1672 63.58 0 1957553..1958233 + 226 58581478 rnc XOO1855 - ribonuclease III 1673 65.56 0 1958230..1959129 + 299 58581479 era XOO1856 - GTP-binding protein Era 1674 64.87 0 1959353..1960075 + 240 58581480 recO XOO1857 - DNA repair protein RecO 1675 65.42 0 1960224..1960946 - 240 58581481 - XOO1858 - hypothetical protein 1676 64.72 0 1961000..1962439 + 479 58581482 rumA XOO1859 - 23S rRNA 5-methyluridine methyltransferase 1677 60.04 -1 1962614..1963111 + 165 58581483 - XOO1860 - hypothetical protein 1678 63.35 0 1963207..1964442 - 411 58581484 - XOO1861 - transposase 1679 62.89 0 1964671..1966047 + 458 122879140 - XOO1863 - IS1478 transposase 1680 65.88 0 1966092..1966850 + 252 58581487 frnE XOO1864 - polyketide synthase 1681 65.20 0 1966810..1967901 + 363 58581488 - XOO1865 - hypothetical protein 1682 64.83 0 1968082..1969659 + 525 58581489 - XOO1866 - hypothetical protein 1683 67.86 +1 1969695..1970780 + 361 58581490 nagZ XOO1867 - beta-hexosaminidase 1684 66.31 0 1970780..1971334 + 184 58581491 hpt XOO1868 - hypoxanthine-guanine phosphoribosyltransferase 1685 63.55 0 1971402..1972172 + 256 58581492 deoD XOO1869 - 5'-methylthioadenosine phosphorylase 1686 59.65 -1 1972238..1972465 + 75 58581493 scoF XOO1870 - cold shock protein 1687 67.60 +1 1974000..1974644 - 214 58581496 - XOO1873 - hypothetical protein 1688 66.79 0 1974634..1977135 - 833 58581497 lhr2 XOO1874 - helicase-related protein 1689 66.67 0 1977132..1978736 - 534 161899000 lig2 XOO1875 - ATP-dependent DNA ligase 1690 72.22 +2 1978733..1978966 - 77 121632089 - XOO4790 - hypothetical protein 1691 66.03 0 1978963..1980057 - 364 58581499 - XOO1876 - mRNA 3'-end processing factor 1692 68.58 +1 1980322..1980687 - 121 58581500 - XOO1877 - hypothetical protein 1693 65.72 0 1980684..1981319 - 211 58581501 - XOO1878 - hypothetical protein 1694 66.26 0 1981372..1983081 - 569 58581502 - XOO1879 - sensor histidine kinase 1695 69.11 +1 1983190..1983516 - 108 58581503 - XOO1880 - hypothetical protein 1696 64.29 0 1984213..1985388 - 391 58581504 atoB XOO1881 - acetoacetyl-CoA thiolase 1697 64.83 0 1985544..1988372 + 942 58581505 - XOO1882 - serine protease 1698 63.49 0 1988433..1989533 - 366 58581506 leu XOO1883 - leucine dehydrogenase 1699 61.14 0 1990001..1990561 - 186 58581507 - XOO1884 - hypothetical protein 1700 55.17 -2 1990930..1991103 + 57 58581508 - XOO1885 - hypothetical protein 1701 60.39 0 1991264..1991518 - 84 58581509 - XOO1886 - hypothetical protein 1702 64.79 0 1991693..1991959 + 88 58581510 - XOO1887 - hypothetical protein 1703 58.74 -1 1992150..1992818 - 222 58581511 - XOO1888 - hypothetical protein 1704 62.73 0 1992892..1993881 + 329 58581512 - XOO1889 - ISxac1 transposase 1705 63.68 0 1993882..1994115 + 77 58581513 - XOO1890 - ISxac1 transposase 1706 62.26 0 1994141..1995523 + 460 122879141 - XOO1891 - putative ISXo8 transposase 1707 62.90 0 1995916..1996101 - 61 121632090 - XOO4791 - hypothetical protein 1708 66.31 0 1996291..1997697 - 468 58581515 yegD XOO1892 - heat shock protein 1709 58.33 -1 1998184..1998279 - 31 58581517 slyD XOO1894 - peptidyl-prolyl cis-trans isomerase 1710 63.11 0 1998455..1999690 - 411 58581518 - XOO1895 - transposase 1711 62.92 0 1999938..2000870 - 310 58581520 catA XOO1897 - cation transport protein 1712 61.57 0 2000928..2001437 + 169 58581521 - XOO1898 - hypothetical protein 1713 64.94 0 2001726..2002649 - 307 58581522 - XOO1899 - hypothetical protein 1714 65.47 0 2002907..2004247 - 446 58581523 nerA XOO1900 - GTN reductase 1715 64.60 0 2004246..2005457 + 403 58581524 araJ XOO1901 - MFS transporter 1716 62.72 0 2006020..2006475 + 151 58581525 - XOO1902 - hypothetical protein 1717 63.58 0 2006608..2007351 + 247 58581526 - XOO1903 - hypothetical protein 1718 68.14 +1 2007387..2007995 + 202 58581527 - XOO1904 - hypothetical protein 1719 67.18 0 2008055..2008249 + 64 58581528 - XOO1905 - hypothetical protein 1720 67.10 0 2008319..2009689 + 456 122879142 acvB XOO1906 - virulence protein 1721 67.41 +1 2010313..2012877 - 854 122879143 - XOO1907 - hypothetical protein 1722 68.03 +1 2012946..2013311 + 121 58581531 - XOO1908 - hypothetical protein 1723 67.03 0 2013290..2013847 + 185 58581532 - XOO1909 - hypothetical protein 1724 62.73 0 2013825..2014205 + 126 58581533 - XOO1910 - hypothetical protein 1725 64.89 0 2014368..2015438 - 356 58581534 - XOO1911 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.