version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1588 65.44 0 1837932..1838663 + 243 58581384 cutC XOO1761 - copper homeostasis protein 1589 58.88 -1 1838688..1840241 - 517 122879132 - XOO1762 - leucin rich protein 1590 65.31 0 1840788..1841891 - 367 58581386 - XOO1763 - hypothetical protein 1591 61.24 0 1842394..1842780 - 128 58581387 - XOO1764 - transposase 1592 65.77 0 1843972..1844082 - 36 58581390 - XOO1767 - hypothetical protein 1593 66.25 0 1844913..1847321 + 802 122879133 - XOO1768 - hypothetical protein 1594 64.93 0 1847371..1849326 - 651 58581392 bga XOO1769 - beta-galactosidase 1595 65.33 0 1849492..1851894 - 800 58581393 - XOO1770 - hypothetical protein 1596 66.73 0 1851970..1853433 - 487 58581394 - XOO1771 - hypothetical protein 1597 64.19 0 1854236..1855651 + 471 58581395 - XOO1772 - membrane-fusion protein 1598 61.20 0 1856295..1857263 - 322 58581396 - XOO1773 - putative transposase 1599 52.01 -2 1857506..1858624 + 372 58581397 - XOO1774 - hypothetical protein 1600 62.38 0 1860063..1861322 - 419 58581400 - XOO1777 - transposase 1601 60.57 0 1861431..1863545 + 704 58581401 - XOO1778 - colicin V secretion ABC transporter ATP-binding protein 1602 66.22 0 1863690..1866359 - 889 58581402 - XOO1779 - glucan 1,4-beta-glucosidase 1603 64.95 0 1866566..1869247 - 893 58581403 - XOO1780 - beta-mannosidase 1604 65.52 0 1869269..1871803 - 844 58581404 nahA XOO1781 - beta-hexosaminidase 1605 59.55 -1 1872117..1873184 - 355 58581405 - XOO1782 - hypothetical protein 1606 64.28 0 1873188..1874903 - 571 58581406 fucA1 XOO1783 - alpha-L-fucosidase 1607 61.17 0 1875083..1877794 - 903 58581407 iroN XOO1784 - TonB-dependent receptor 1608 66.58 0 1878412..1879512 + 366 58581408 glk XOO1785 - glucokinase 1609 68.91 +1 1879814..1880617 - 267 58581409 - XOO1786 - hypothetical protein 1610 65.89 0 1880539..1881957 - 472 58581410 bioA XOO1787 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1611 64.80 0 1881906..1882547 + 213 58581412 nudE XOO1789 - ADP-ribose diphosphatase NudE 1612 66.04 0 1882544..1883344 + 266 122879134 cysQ XOO1788 - sulfite synthesis pathway protein 1613 64.61 0 1883587..1884606 + 339 58581413 mazG XOO1790 - nucleoside triphosphate pyrophosphohydrolase 1614 64.71 0 1884603..1884857 + 84 58581414 - XOO1791 - hypothetical protein 1615 66.67 0 1884845..1884940 + 31 121632085 - XOO4784 - hypothetical protein 1616 62.94 0 1885238..1886203 + 321 58581415 - XOO1792 - hypothetical protein 1617 66.32 0 1886207..1886785 + 192 58581416 - XOO1793 - hypothetical protein 1618 63.96 0 1886813..1887922 + 369 58581417 gcvT XOO1794 - glycine cleavage system aminomethyltransferase T 1619 63.38 0 1888059..1888454 + 131 58581418 gcvH XOO1795 - glycine cleavage system protein H 1620 57.34 -1 1889147..1890229 + 360 58581419 - XOO1796 - hypothetical protein 1621 65.99 0 1890823..1892289 - 488 58581420 bla XOO1797 - beta-lactamase 1622 62.52 0 1892649..1893806 + 385 58581421 - XOO1798 - hypothetical protein 1623 65.33 0 1894081..1894530 + 149 58581423 - XOO1800 - hypothetical protein 1624 63.65 0 1897395..1898288 - 297 58581426 - XOO1803 - hypothetical protein 1625 65.14 0 1898380..1899033 + 217 58581427 - XOO1804 - transcriptional regulator 1626 58.49 -1 1899143..1902052 - 969 58581428 - XOO1805 - hypothetical protein 1627 65.63 0 1902300..1903169 - 289 58581429 - XOO1806 - hypothetical protein 1628 65.71 0 1903290..1904333 - 347 58581430 - XOO1807 - heat shock protein 1629 64.23 0 1904255..1904992 + 245 121632086 mtgA XOO4787 - monofunctional biosynthetic peptidoglycan transglycosylase 1630 63.41 0 1904935..1906041 + 368 58581432 gtrB XOO1809 - glucosyl transferase 1631 58.59 -1 1906001..1906099 + 32 121632087 - XOO4788 - hypothetical protein 1632 62.22 0 1906115..1906429 + 104 58581433 - XOO1810 - hypothetical protein 1633 66.01 0 1907732..1907884 - 50 58581436 - XOO1813 - hypothetical protein 1634 60.62 0 1907913..1908557 - 214 58581437 hly3 XOO1814 - hemolysin III 1635 63.93 0 1908633..1910237 - 534 58581438 prfC XOO1815 - peptide chain release factor 3 1636 69.82 +1 1910370..1911257 - 295 122879135 - XOO1816 - hypothetical protein 1637 65.88 0 1911471..1912619 + 382 58581440 metA XOO1817 - homoserine O-acetyltransferase 1638 64.20 0 1912616..1913833 + 405 58581441 metB XOO1818 - cystathionine gamma-synthase 1639 65.48 0 1914251..1914925 + 224 122879136 - XOO1820 - homoserine dehydrogenase 1640 64.06 0 1915599..1916981 - 460 122879137 sdaA XOO1821 - L-serine dehydratase 1641 67.47 +1 1917054..1917302 + 82 58581445 - XOO1822 - hypothetical protein 1642 65.64 0 1917388..1917777 - 129 58581446 - XOO1823 - cold shock domain-containing protein 1643 64.39 0 1918102..1918671 - 189 58581447 - XOO1824 - hypothetical protein 1644 64.01 0 1918681..1919244 - 187 58581448 yodB XOO1825 - cytochrome B561 1645 68.17 +1 1919241..1919903 - 220 58581449 - XOO1826 - hypothetical protein 1646 64.02 0 1919943..1923575 + 1210 58581450 - XOO1827 - histidine kinase-response regulator hybrid protein 1647 64.20 0 1923865..1927428 + 1187 122879138 - XOO1828 - histidine kinase/response regulator hybrid protein 1648 57.96 -1 1927425..1930031 + 868 58581452 - XOO1829 - histidine kinase-response regulator hybrid protein 1649 61.20 0 1930083..1931051 + 322 58581453 - XOO1830 - putative transposase 1650 62.57 0 1931162..1932235 + 357 58581454 - XOO1831 - histidine kinase-response regulator hybrid protein 1651 62.07 0 1932260..1932433 - 57 121632088 emrA XOO4789 - MFS transporter 1652 55.24 -2 1932551..1932655 + 34 58581455 tnp XOO1832 - transposase 1653 61.33 0 1932855..1933154 + 99 58581456 - XOO1833 - hypothetical protein 1654 68.92 +1 1933339..1933560 - 73 58581457 - XOO1834 - ISxac3 transposase 1655 66.56 0 1933766..1935697 + 643 58581458 - XOO1835 - hypothetical protein 1656 63.66 0 1935819..1936217 + 132 58581459 - XOO1836 - hypothetical protein 1657 64.05 0 1937238..1938230 - 330 58581461 bga XOO1838 - beta-galactosidase 1658 67.03 0 1940077..1941462 - 461 122879139 - XOO1841 - transcriptional regulator 1659 65.21 0 1941601..1943106 + 501 58581465 mmsA XOO1842 - methylmalonate-semialdehyde dehydrogenase 1660 64.30 0 1943075..1944298 + 407 58581466 fadE9 XOO1843 - acyl-CoA dehydrogenase 1661 63.91 0 1944295..1945092 + 265 58581467 paaF XOO1844 - enoyl-CoA hydratase 1662 65.56 0 1945092..1946264 + 390 58581468 - XOO1845 - enoyl-CoA hydratase 1663 65.81 0 1946388..1947326 + 312 58581469 mmsB XOO1846 - 3-hydroxyisobutirate dehydrogenase 1664 65.56 0 1947535..1948530 + 331 58581470 czcD XOO1847 - cobalt-zinc-cadmium resistance protein 1665 66.91 0 1948747..1950828 - 693 58581471 fadB XOO1848 - 3-hydroxyacyl-CoA dehydrogenase 1666 62.15 0 1950933..1951685 + 250 58581472 algU XOO1849 - RNA polymerase sigma factor RpoE 1667 70.78 +1 1951682..1952581 + 299 58581473 - XOO1850 - regulatory protein 1668 67.34 +1 1952508..1954277 + 589 58581474 mucD XOO1851 - periplasmic protease 1669 62.24 0 1954443..1956248 + 601 58581475 lepA XOO1852 - GTP-binding protein LepA 1670 58.80 -1 1956355..1957155 + 266 58581476 lepB XOO1853 - signal peptidase I 1671 54.23 -2 1957186..1957563 + 125 58581477 - XOO1854 - hypothetical protein 1672 63.58 0 1957553..1958233 + 226 58581478 rnc XOO1855 - ribonuclease III 1673 65.56 0 1958230..1959129 + 299 58581479 era XOO1856 - GTP-binding protein Era 1674 64.87 0 1959353..1960075 + 240 58581480 recO XOO1857 - DNA repair protein RecO 1675 65.42 0 1960224..1960946 - 240 58581481 - XOO1858 - hypothetical protein 1676 64.72 0 1961000..1962439 + 479 58581482 rumA XOO1859 - 23S rRNA 5-methyluridine methyltransferase 1677 60.04 -1 1962614..1963111 + 165 58581483 - XOO1860 - hypothetical protein 1678 63.35 0 1963207..1964442 - 411 58581484 - XOO1861 - transposase 1679 62.89 0 1964671..1966047 + 458 122879140 - XOO1863 - IS1478 transposase 1680 65.88 0 1966092..1966850 + 252 58581487 frnE XOO1864 - polyketide synthase 1681 65.20 0 1966810..1967901 + 363 58581488 - XOO1865 - hypothetical protein 1682 64.83 0 1968082..1969659 + 525 58581489 - XOO1866 - hypothetical protein 1683 67.86 +1 1969695..1970780 + 361 58581490 nagZ XOO1867 - beta-hexosaminidase 1684 66.31 0 1970780..1971334 + 184 58581491 hpt XOO1868 - hypoxanthine-guanine phosphoribosyltransferase 1685 63.55 0 1971402..1972172 + 256 58581492 deoD XOO1869 - 5'-methylthioadenosine phosphorylase 1686 59.65 -1 1972238..1972465 + 75 58581493 scoF XOO1870 - cold shock protein 1687 67.60 +1 1974000..1974644 - 214 58581496 - XOO1873 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.