IslandPathversion 1.0

IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 63.81 STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1539	 68.57	+1	1765841..1766050	-	69	58581331	-	XOO1708	-	phage-related tail protein
1540	 69.05	+1	1766050..1766427	-	125	58581332	-	XOO1709	-	phage-related capsid completion protein
1541	 69.86	+1	1766617..1767336	-	239	58581333	-	XOO1710	-	phage-related terminase
1542	 64.41	0	1767340..1768356	-	338	58581335	-	XOO1712	-	phage-related major capsid protein
1543	 63.82	0	1768403..1769245	-	280	58581336	-	XOO1713	-	phage-related capsid scaffold protein
1544	 62.41	0	1769367..1771151	+	594	58581337	-	XOO1714	-	phage-related terminase
1545	 65.79	0	1771148..1772173	+	341	58581338	-	XOO1715	-	phage-related capsid packaging protein
1546	 67.52	+1	1772362..1773063	+	233	122879126	-	XOO1717	-	site-specific DNA-methyltransferase
1547	 61.47	0	1774916..1775473	-	185	58581341	-	XOO1718	-	hypothetical protein
1548	 67.96	+1	1776880..1777809	+	309	122879127	-	XOO1719	-	hypothetical protein
1549	 62.34	0	1777915..1780641	+	908	58581343	-	XOO1720	-	hypothetical protein
1550	 68.16	+1	1781422..1781955	+	177	121632083	-	XOO4780	-	hypothetical protein
1551	 60.65	0	1782622..1783053	-	143	58581344	-	XOO1721	-	response regulator
1552	 64.89	0	1783105..1783611	-	168	58581345	-	XOO1722	-	hypothetical protein
1553	 65.00	0	1783741..1785537	-	598	58581346	recQ	XOO1723	-	DNA helicase
1554	 62.96	0	1786095..1786688	-	197	58581347	-	XOO1724	-	DNA-binding related protein
1555	 66.45	0	1786742..1790863	+	1373	58581348	hrpA	XOO1725	-	ATP-dependent RNA helicase
1556	 61.85	0	1790787..1791929	+	380	58581349	-	XOO1726	-	putative transposase
1557	 60.66	0	1792164..1794878	-	904	58581350	fepA	XOO1727	-	TonB-dependent receptor
1558	 68.86	+1	1795230..1795502	-	90	58581352	glk	XOO1729	-	glucose kinase
1559	 64.05	0	1795582..1796001	-	139	58581353	glk	XOO1730	-	glucose kinase
1560	 64.49	0	1796302..1797957	-	551	58581354	-	XOO1731	-	hypothetical protein
1561	 62.84	0	1798245..1798766	-	173	58581355	-	XOO1732	-	hypothetical protein
1562	 67.88	+1	1798820..1800136	-	438	58581356	pqqE	XOO1733	-	pyrroloquinoline quinone biosynthesis protein PqqE
1563	 63.62	0	1800210..1800998	-	262	58581357	pqqC	XOO1734	-	pyrroloquinoline quinone biosynthesis protein PqqC
1564	 63.67	0	1800959..1801858	-	299	58581358	pqqG	XOO1735	-	pyrroloquinoline quinone biosynthesis protein PqqB
1565	 66.67	0	1802201..1804498	+	765	58581359	relA	XOO1736	-	ATP:GTP 3'-pyrophosphotranferase
1566	 70.37	+1	1804563..1806209	+	548	58581360	-	XOO1737	-	hypothetical protein
1567	 65.43	0	1806542..1808569	-	675	122879128	-	XOO1738	-	glycosyltransferase
1568	 67.77	+1	1808886..1811330	+	814	58581362	ponB	XOO1739	-	penicillin-binding protein 1B
1569	 69.83	+1	1811332..1811868	+	178	58581363	-	XOO1740	-	hypothetical protein
1570	 66.22	0	1812068..1814095	+	675	58581364	yoaA	XOO1741	-	ATP-dependent helicase
1571	 70.11	+1	1814016..1814828	+	270	58581365	-	XOO1742	-	hypothetical protein
1572	 67.98	+1	1814825..1815739	+	304	58581366	draG	XOO1743	-	dinitrogenase reductase activationg glycohydrolase
1573	 68.26	+1	1816033..1816908	-	291	58581367	tonB	XOO1744	-	TonB protein
1574	 67.80	+1	1816905..1817876	-	323	58581368	gshB	XOO1745	-	glutathione synthetase
1575	 54.73	-2	1818105..1818506	+	133	122879129	pilG	XOO1746	-	pilus protein
1576	 59.23	-1	1818524..1818886	+	120	58581370	pilH	XOO1747	-	PilH
1577	 63.86	0	1818883..1819416	+	177	58581371	pilI	XOO1748	-	pilus biogenesis protein
1578	 64.70	0	1819456..1821492	+	678	58581372	pilJ	XOO1749	-	pilus biogenesis protein
1579	 66.31	0	1826572..1828560	+	662	58581374	pilL	XOO1751	-	PilL
1580	 67.95	+1	1828526..1829770	+	414	58581375	-	XOO1752	-	hypothetical protein
1581	 64.78	0	1829804..1830280	+	158	58581376	-	XOO1753	-	hypothetical protein
1582	 65.06	0	1830531..1831154	+	207	58581377	rimJ	XOO1754	-	ribosomal protein alanine acetyltransferase
1583	 61.12	0	1831166..1832428	-	420	58581378	-	XOO1755	-	ISRSO5-transposase protein
1584	 67.82	+1	1833477..1833737	-	86	58581379	-	XOO1756	-	hypothetical protein
1585	 64.10	0	1833983..1835035	-	350	122879130	-	XOO1757	-	hypothetical protein
1586	 62.50	0	1835492..1835659	+	55	121632084	-	XOO4782	-	putative transposase
1587	 64.51	0	1836871..1837935	+	354	122879131	aspG	XOO1760	-	asparaginase
1588	 65.44	0	1837932..1838663	+	243	58581384	cutC	XOO1761	-	copper homeostasis protein
1589	 58.88	-1	1838688..1840241	-	517	122879132	-	XOO1762	-	leucin rich protein
1590	 65.31	0	1840788..1841891	-	367	58581386	-	XOO1763	-	hypothetical protein
1591	 61.24	0	1842394..1842780	-	128	58581387	-	XOO1764	-	transposase
1592	 65.77	0	1843972..1844082	-	36	58581390	-	XOO1767	-	hypothetical protein
1593	 66.25	0	1844913..1847321	+	802	122879133	-	XOO1768	-	hypothetical protein
1594	 64.93	0	1847371..1849326	-	651	58581392	bga	XOO1769	-	beta-galactosidase
1595	 65.33	0	1849492..1851894	-	800	58581393	-	XOO1770	-	hypothetical protein
1596	 66.73	0	1851970..1853433	-	487	58581394	-	XOO1771	-	hypothetical protein
1597	 64.19	0	1854236..1855651	+	471	58581395	-	XOO1772	-	membrane-fusion protein
1598	 61.20	0	1856295..1857263	-	322	58581396	-	XOO1773	-	putative transposase
1599	 52.01	-2	1857506..1858624	+	372	58581397	-	XOO1774	-	hypothetical protein
1600	 62.38	0	1860063..1861322	-	419	58581400	-	XOO1777	-	transposase
1601	 60.57	0	1861431..1863545	+	704	58581401	-	XOO1778	-	colicin V secretion ABC transporter ATP-binding protein
1602	 66.22	0	1863690..1866359	-	889	58581402	-	XOO1779	-	glucan 1,4-beta-glucosidase
1603	 64.95	0	1866566..1869247	-	893	58581403	-	XOO1780	-	beta-mannosidase
1604	 65.52	0	1869269..1871803	-	844	58581404	nahA	XOO1781	-	beta-hexosaminidase
1605	 59.55	-1	1872117..1873184	-	355	58581405	-	XOO1782	-	hypothetical protein
1606	 64.28	0	1873188..1874903	-	571	58581406	fucA1	XOO1783	-	alpha-L-fucosidase
1607	 61.17	0	1875083..1877794	-	903	58581407	iroN	XOO1784	-	TonB-dependent receptor
1608	 66.58	0	1878412..1879512	+	366	58581408	glk	XOO1785	-	glucokinase
1609	 68.91	+1	1879814..1880617	-	267	58581409	-	XOO1786	-	hypothetical protein
1610	 65.89	0	1880539..1881957	-	472	58581410	bioA	XOO1787	-	adenosylmethionine--8-amino-7-oxononanoate transaminase
1611	 64.80	0	1881906..1882547	+	213	58581412	nudE	XOO1789	-	ADP-ribose diphosphatase NudE
1612	 66.04	0	1882544..1883344	+	266	122879134	cysQ	XOO1788	-	sulfite synthesis pathway protein
1613	 64.61	0	1883587..1884606	+	339	58581413	mazG	XOO1790	-	nucleoside triphosphate pyrophosphohydrolase
1614	 64.71	0	1884603..1884857	+	84	58581414	-	XOO1791	-	hypothetical protein
1615	 66.67	0	1884845..1884940	+	31	121632085	-	XOO4784	-	hypothetical protein
1616	 62.94	0	1885238..1886203	+	321	58581415	-	XOO1792	-	hypothetical protein
1617	 66.32	0	1886207..1886785	+	192	58581416	-	XOO1793	-	hypothetical protein
1618	 63.96	0	1886813..1887922	+	369	58581417	gcvT	XOO1794	-	glycine cleavage system aminomethyltransferase T
1619	 63.38	0	1888059..1888454	+	131	58581418	gcvH	XOO1795	-	glycine cleavage system protein H
1620	 57.34	-1	1889147..1890229	+	360	58581419	-	XOO1796	-	hypothetical protein
1621	 65.99	0	1890823..1892289	-	488	58581420	bla	XOO1797	-	beta-lactamase
1622	 62.52	0	1892649