IslandPath Analysis: Xanthomonas oryzae pv. oryzae KACC10331



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.81   STD DEV: 3.50
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439
4144 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1516	 66.67	0	1748200..1748412	-	70	58581309	-	XOO1686	-	hypothetical protein
1517	 59.94	-1	1748698..1749024	-	108	58581310	-	XOO1687	-	hypothetical protein
1518	 57.08	-1	1749350..1749787	+	145	58581311	-	XOO1688	-	hypothetical protein
1519	 62.01	0	1750448..1751434	-	328	58581312	-	XOO1689	-	phage-related tail protein
1520	 64.43	0	1751431..1751832	-	133	58581313	-	XOO1690	-	phage-related tail protein
1521	 68.30	+1	1751845..1754715	-	956	58581314	-	XOO1691	-	phage-related tail protein
1522	 65.79	0	1754748..1754861	-	37	58581315	-	XOO1692	-	hypothetical protein
1523	 64.03	0	1754870..1755172	-	100	58581316	-	XOO1693	-	phage-related tail protein
1524	 62.16	0	1755218..1755727	-	169	58581317	-	XOO1694	-	phage-related tail protein
1525	 63.84	0	1755758..1756924	-	388	58581318	-	XOO1695	-	phage-related tail protein
1526	 68.89	+1	1756936..1757295	-	119	58581319	-	XOO1696	-	phage-related baseplate protein
1527	 65.43	0	1757292..1757855	-	187	58581320	-	XOO1697	-	phage-related baseplate protein
1528	 66.67	0	1757916..1758290	-	124	121632082	-	XOO4779	-	hypothetical protein
1529	 63.81	0	1758502..1760007	-	501	58581321	-	XOO1698	-	hypothetical protein
1530	 67.02	0	1760017..1760586	-	189	58581322	-	XOO1699	-	phage-related tail protein
1531	 63.52	0	1760555..1761508	-	317	58581323	-	XOO1700	-	phage-related baseplate assembly protein
1532	 45.67	-2	1761576..1762418	-	280	58581324	-	XOO1701	-	hypothetical protein
1533	 63.98	0	1763236..1763682	-	148	58581325	-	XOO1702	-	phage-related tail protein
1534	 63.58	0	1763670..1764122	-	150	58581326	-	XOO1703	-	phage-related tail protein
1535	 68.30	+1	1764086..1764574	-	162	58581327	-	XOO1704	-	hypothetical protein
1536	 66.51	0	1764574..1765215	-	213	58581328	lys	XOO1705	-	phage-related lytic enzyme
1537	 68.73	+1	1765212..1765502	-	96	58581329	-	XOO1706	-	hypothetical protein
1538	 64.99	0	1765480..1765836	-	118	58581330	-	XOO1707	-	hypothetical protein
1539	 68.57	+1	1765841..1766050	-	69	58581331	-	XOO1708	-	phage-related tail protein
1540	 69.05	+1	1766050..1766427	-	125	58581332	-	XOO1709	-	phage-related capsid completion protein
1541	 69.86	+1	1766617..1767336	-	239	58581333	-	XOO1710	-	phage-related terminase
1542	 64.41	0	1767340..1768356	-	338	58581335	-	XOO1712	-	phage-related major capsid protein
1543	 63.82	0	1768403..1769245	-	280	58581336	-	XOO1713	-	phage-related capsid scaffold protein
1544	 62.41	0	1769367..1771151	+	594	58581337	-	XOO1714	-	phage-related terminase
1545	 65.79	0	1771148..1772173	+	341	58581338	-	XOO1715	-	phage-related capsid packaging protein
1546	 67.52	+1	1772362..1773063	+	233	122879126	-	XOO1717	-	site-specific DNA-methyltransferase
1547	 61.47	0	1774916..1775473	-	185	58581341	-	XOO1718	-	hypothetical protein
1548	 67.96	+1	1776880..1777809	+	309	122879127	-	XOO1719	-	hypothetical protein
1549	 62.34	0	1777915..1780641	+	908	58581343	-	XOO1720	-	hypothetical protein
1550	 68.16	+1	1781422..1781955	+	177	121632083	-	XOO4780	-	hypothetical protein
1551	 60.65	0	1782622..1783053	-	143	58581344	-	XOO1721	-	response regulator
1552	 64.89	0	1783105..1783611	-	168	58581345	-	XOO1722	-	hypothetical protein
1553	 65.00	0	1783741..1785537	-	598	58581346	recQ	XOO1723	-	DNA helicase
1554	 62.96	0	1786095..1786688	-	197	58581347	-	XOO1724	-	DNA-binding related protein
1555	 66.45	0	1786742..1790863	+	1373	58581348	hrpA	XOO1725	-	ATP-dependent RNA helicase
1556	 61.85	0	1790787..1791929	+	380	58581349	-	XOO1726	-	putative transposase
1557	 60.66	0	1792164..1794878	-	904	58581350	fepA	XOO1727	-	TonB-dependent receptor
1558	 68.86	+1	1795230..1795502	-	90	58581352	glk	XOO1729	-	glucose kinase
1559	 64.05	0	1795582..1796001	-	139	58581353	glk	XOO1730	-	glucose kinase
1560	 64.49	0	1796302..1797957	-	551	58581354	-	XOO1731	-	hypothetical protein
1561	 62.84	0	1798245..1798766	-	173	58581355	-	XOO1732	-	hypothetical protein
1562	 67.88	+1	1798820..1800136	-	438	58581356	pqqE	XOO1733	-	pyrroloquinoline quinone biosynthesis protein PqqE
1563	 63.62	0	1800210..1800998	-	262	58581357	pqqC	XOO1734	-	pyrroloquinoline quinone biosynthesis protein PqqC
1564	 63.67	0	1800959..1801858	-	299	58581358	pqqG	XOO1735	-	pyrroloquinoline quinone biosynthesis protein PqqB
1565	 66.67	0	1802201..1804498	+	765	58581359	relA	XOO1736	-	ATP:GTP 3'-pyrophosphotranferase
1566	 70.37	+1	1804563..1806209	+	548	58581360	-	XOO1737	-	hypothetical protein
1567	 65.43	0	1806542..1808569	-	675	122879128	-	XOO1738	-	glycosyltransferase
1568	 67.77	+1	1808886..1811330	+	814	58581362	ponB	XOO1739	-	penicillin-binding protein 1B
1569	 69.83	+1	1811332..1811868	+	178	58581363	-	XOO1740	-	hypothetical protein
1570	 66.22	0	1812068..1814095	+	675	58581364	yoaA	XOO1741	-	ATP-dependent helicase
1571	 70.11	+1	1814016..1814828	+	270	58581365	-	XOO1742	-	hypothetical protein
1572	 67.98	+1	1814825..1815739	+	304	58581366	draG	XOO1743	-	dinitrogenase reductase activationg glycohydrolase
1573	 68.26	+1	1816033..1816908	-	291	58581367	tonB	XOO1744	-	TonB protein
1574	 67.80	+1	1816905..1817876	-	323	58581368	gshB	XOO1745	-	glutathione synthetase
1575	 54.73	-2	1818105..1818506	+	133	122879129	pilG	XOO1746	-	pilus protein
1576	 59.23	-1	1818524..1818886	+	120	58581370	pilH	XOO1747	-	PilH
1577	 63.86	0	1818883..1819416	+	177	58581371	pilI	XOO1748	-	pilus biogenesis protein
1578	 64.70	0	1819456..1821492	+	678	58581372	pilJ	XOO1749	-	pilus biogenesis protein
1579	 66.31	0	1826572..1828560	+	662	58581374	pilL	XOO1751	-	PilL
1580	 67.95	+1	1828526..1829770	+	414	58581375	-	XOO1752	-	hypothetical protein
1581	 64.78	0	1829804..1830280	+	158	58581376	-	XOO1753	-	hypothetical protein
1582	 65.06	0	1830531..1831154	+	207	58581377	rimJ	XOO1754	-	ribosomal protein alanine acetyltransferase
1583	 61.12	0	1831166..1832428	-	420	58581378	-	XOO1755	-	ISRSO5-transposase protein
1584	 67.82	+1	1833477..1833737	-	86	58581379	-	XOO1756	-	hypothetical protein
1585	 64.10	0	1833983..1835035	-	350	122879130	-	XOO1757	-	hypothetical protein
1586	 62.50	0	1835492..1835659	+	55	121632084	-	XOO4782	-	putative transposase
1587	 64.51	0	1836871..1837935	+	354	122879131	aspG	XOO1760	-	asparaginase
1588	 65.44	0	1837932..1838663	+	243	58581384	cutC	XOO1761	-	copper homeostasis protein
1589	 58.88	-1	1838688..1840241	-	517	122879132	-	XOO1762	-	leucin rich protein
1590	 65.31	0	1840788..1841891	-	367	58581386	-	XOO1763	-	hypothetical protein
1591	 61.24	0	1842394..1842780	-	128	58581387	-	XOO1764	-	transposase
1592	 65.77	0	1843972..1844082	-	36	58581390	-	XOO1767	-	hypothetical protein
1593	 66.25	0	1844913..1847321	+	802	122879133	-	XOO1768	-	hypothetical protein
1594	 64.93	0	1847371..1849326	-	651	58581392	bga	XOO1769	-	beta-galactosidase
1595	 65.33	0	1849492..1851894	-	800	58581393	-	XOO1770	-	hypothetical protein
1596	 66.73	0	1851970..1853433	-	487	58581394	-	XOO1771	-	hypothetical protein
1597	 64.19	0	1854236..1855651	+	471	58581395	-	XOO1772	-	membrane-fusion protein
1598	 61.20	0	1856295..1857263	-	322	58581396	-	XOO1773	-	putative transposase
1599	 52.01	-2	1857506..1858624	+	372