version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1472 63.93 0 1700857..1701843 + 328 58581263 - XOO1640 - IS1404 transposase 1473 66.54 0 1701840..1703468 - 542 58581264 - XOO1641 - hypothetical protein 1474 64.95 0 1703725..1706346 - 873 58581265 mutS XOO1642 - DNA mismatch repair protein 1475 62.95 0 1707049..1707855 - 268 122879120 - XOO1643 - IS1404 transposase 1476 58.52 -1 1707887..1708156 - 89 58581268 - XOO1645 - IS1404 transposase 1477 64.40 0 1708175..1708615 + 146 58581269 - XOO1646 - putative ISXo8 transposase 1478 58.77 -1 1708644..1708871 + 75 58581270 - XOO1647 - putative ISXo8 transposase 1479 66.38 0 1709252..1710646 - 464 122879121 radA XOO1648 - DNA repair protein RadA 1480 66.45 0 1709252..1710643 - 463 121632079 radA XOO4776 - DNA repair protein RadA 1481 61.18 0 1710728..1711219 - 163 58581272 - XOO1649 - IS1404 transposase 1482 65.03 0 1711042..1711713 - 223 58581273 - XOO1650 - IS1404 transposase 1483 60.23 -1 1711566..1711829 - 87 121632080 - XOO4777 - IS1404 transposase 1484 64.61 0 1712034..1713590 + 518 121632081 - XOO4778 - hypothetical protein 1485 68.40 +1 1713854..1715005 - 383 58581274 plcN XOO1651 - phospholipase C 1486 66.02 0 1716174..1717412 - 412 122879122 ycaD XOO1653 - transmembrane transport protein 1487 66.45 0 1717679..1718146 + 155 58581277 - XOO1654 - hypothetical protein 1488 69.76 +1 1718644..1719420 - 258 58581278 - XOO1655 - hypothetical protein 1489 65.04 0 1719500..1721344 + 614 58581279 aspS XOO1656 - aspartyl-tRNA synthetase 1490 63.83 0 1721856..1722383 + 175 122879123 - XOO1657 - acetyltransferase 1491 71.50 +2 1722561..1723160 + 199 122879124 - XOO1658 - hypothetical protein 1492 66.39 0 1723250..1723978 + 242 58581282 - XOO1659 - hypothetical protein 1493 66.10 0 1724093..1724617 + 174 58581283 ruvC XOO1660 - Holliday junction resolvase 1494 66.84 0 1724775..1725359 + 194 161899002 ruvA XOO1661 - Holliday junction DNA helicase motor protein 1495 64.31 0 1725559..1727466 + 635 58581285 kup XOO1662 - potassium uptake protein 1496 65.90 0 1727595..1728632 + 345 58581286 ruvB XOO1663 - Holliday junction DNA helicase B 1497 63.18 0 1728685..1729143 + 152 58581287 - XOO1664 - hypothetical protein 1498 63.46 0 1729155..1729934 + 259 58581288 tolQ XOO1665 - hypothetical protein 1499 64.09 0 1729959..1730540 + 193 58581289 tolR XOO1666 - hypothetical protein 1500 67.24 0 1730530..1731570 + 346 58581290 tolA XOO1667 - hypothetical protein 1501 64.72 0 1731764..1733149 + 461 58581291 tolB XOO1668 - translocation protein TolB 1502 62.45 0 1733180..1733725 + 181 58581292 ompP6 XOO1669 - outer membrane protein P6 precursor 1503 62.15 0 1733732..1734550 + 272 58581293 - XOO1670 - hypothetical protein 1504 63.03 0 1734644..1735276 + 210 58581294 - XOO1671 - radical activating enzyme 1505 63.11 0 1735396..1736631 + 411 58581296 - XOO1673 - transposase 1506 63.03 0 1736713..1737948 + 411 58581298 - XOO1675 - transposase 1507 54.81 -2 1738343..1738789 - 148 58581300 - XOO1677 - transposase 1508 64.63 0 1738829..1740205 - 458 122879125 - XOO1678 - IS1478 transposase 1509 66.22 0 1740584..1741258 + 224 58581302 exsB XOO1679 - transcriptional regulator 1510 61.52 0 1741503..1742687 - 394 58581303 int XOO1680 - phage-related integrase 1511 62.45 0 1742687..1742947 - 86 58581304 - XOO1681 - hypothetical protein 1512 60.87 0 1743619..1743894 - 91 58581305 - XOO1682 - hypothetical protein 1513 64.23 0 1744056..1744466 - 136 58581306 - XOO1683 - hypothetical protein 1514 58.78 -1 1744692..1744970 - 92 58581307 - XOO1684 - hypothetical protein 1515 62.55 0 1745494..1748190 - 898 58581308 - XOO1685 - hypothetical protein 1516 66.67 0 1748200..1748412 - 70 58581309 - XOO1686 - hypothetical protein 1517 59.94 -1 1748698..1749024 - 108 58581310 - XOO1687 - hypothetical protein 1518 57.08 -1 1749350..1749787 + 145 58581311 - XOO1688 - hypothetical protein 1519 62.01 0 1750448..1751434 - 328 58581312 - XOO1689 - phage-related tail protein 1520 64.43 0 1751431..1751832 - 133 58581313 - XOO1690 - phage-related tail protein 1521 68.30 +1 1751845..1754715 - 956 58581314 - XOO1691 - phage-related tail protein 1522 65.79 0 1754748..1754861 - 37 58581315 - XOO1692 - hypothetical protein 1523 64.03 0 1754870..1755172 - 100 58581316 - XOO1693 - phage-related tail protein 1524 62.16 0 1755218..1755727 - 169 58581317 - XOO1694 - phage-related tail protein 1525 63.84 0 1755758..1756924 - 388 58581318 - XOO1695 - phage-related tail protein 1526 68.89 +1 1756936..1757295 - 119 58581319 - XOO1696 - phage-related baseplate protein 1527 65.43 0 1757292..1757855 - 187 58581320 - XOO1697 - phage-related baseplate protein 1528 66.67 0 1757916..1758290 - 124 121632082 - XOO4779 - hypothetical protein 1529 63.81 0 1758502..1760007 - 501 58581321 - XOO1698 - hypothetical protein 1530 67.02 0 1760017..1760586 - 189 58581322 - XOO1699 - phage-related tail protein 1531 63.52 0 1760555..1761508 - 317 58581323 - XOO1700 - phage-related baseplate assembly protein 1532 45.67 -2 1761576..1762418 - 280 58581324 - XOO1701 - hypothetical protein 1533 63.98 0 1763236..1763682 - 148 58581325 - XOO1702 - phage-related tail protein 1534 63.58 0 1763670..1764122 - 150 58581326 - XOO1703 - phage-related tail protein 1535 68.30 +1 1764086..1764574 - 162 58581327 - XOO1704 - hypothetical protein 1536 66.51 0 1764574..1765215 - 213 58581328 lys XOO1705 - phage-related lytic enzyme 1537 68.73 +1 1765212..1765502 - 96 58581329 - XOO1706 - hypothetical protein 1538 64.99 0 1765480..1765836 - 118 58581330 - XOO1707 - hypothetical protein 1539 68.57 +1 1765841..1766050 - 69 58581331 - XOO1708 - phage-related tail protein 1540 69.05 +1 1766050..1766427 - 125 58581332 - XOO1709 - phage-related capsid completion protein 1541 69.86 +1 1766617..1767336 - 239 58581333 - XOO1710 - phage-related terminase 1542 64.41 0 1767340..1768356 - 338 58581335 - XOO1712 - phage-related major capsid protein 1543 63.82 0 1768403..1769245 - 280 58581336 - XOO1713 - phage-related capsid scaffold protein 1544 62.41 0 1769367..1771151 + 594 58581337 - XOO1714 - phage-related terminase 1545 65.79 0 1771148..1772173 + 341 58581338 - XOO1715 - phage-related capsid packaging protein 1546 67.52 +1 1772362..1773063 + 233 122879126 - XOO1717 - site-specific DNA-methyltransferase 1547 61.47 0 1774916..1775473 - 185 58581341 - XOO1718 - hypothetical protein 1548 67.96 +1 1776880..1777809 + 309 122879127 - XOO1719 - hypothetical protein 1549 62.34 0 1777915..1780641 + 908 58581343 - XOO1720 - hypothetical protein 1550 68.16 +1 1781422..1781955 + 177 121632083 - XOO4780 - hypothetical protein 1551 60.65 0 1782622..1783053 - 143 58581344 - XOO1721 - response regulator 1552 64.89 0 1783105..1783611 - 168 58581345 - XOO1722 - hypothetical protein 1553 65.00 0 1783741..1785537 - 598 58581346 recQ XOO1723 - DNA helicase 1554 62.96 0 1786095..1786688 - 197 58581347 - XOO1724 - DNA-binding related protein 1555 66.45 0 1786742..1790863 + 1373 58581348 hrpA XOO1725 - ATP-dependent RNA helicase 1556 61.85 0 1790787..1791929 + 380 58581349 - XOO1726 - putative transposase 1557 60.66 0 1792164..1794878 - 904 58581350 fepA XOO1727 - TonB-dependent receptor 1558 68.86 +1 1795230..1795502 - 90 58581352 glk XOO1729 - glucose kinase 1559 64.05 0 1795582..1796001 - 139 58581353 glk XOO1730 - glucose kinase 1560 64.49 0 1796302..1797957 - 551 58581354 - XOO1731 - hypothetical protein 1561 62.84 0 1798245..1798766 - 173 58581355 - XOO1732 - hypothetical protein 1562 67.88 +1 1798820..1800136 - 438 58581356 pqqE XOO1733 - pyrroloquinoline quinone biosynthesis protein PqqE 1563 63.62 0 1800210..1800998 - 262 58581357 pqqC XOO1734 - pyrroloquinoline quinone biosynthesis protein PqqC 1564 63.67 0 1800959..1801858 - 299 58581358 pqqG XOO1735 - pyrroloquinoline quinone biosynthesis protein PqqB 1565 66.67 0 1802201..1804498 + 765 58581359 relA XOO1736 - ATP:GTP 3'-pyrophosphotranferase 1566 70.37 +1 1804563..1806209 + 548 58581360 - XOO1737 - hypothetical protein 1567 65.43 0 1806542..1808569 - 675 122879128 - XOO1738 - glycosyltransferase 1568 67.77 +1 1808886..1811330 + 814 58581362 ponB XOO1739 - penicillin-binding protein 1B 1569 69.83 +1 1811332..1811868 + 178 58581363 - XOO1740 - hypothetical protein 1570 66.22 0 1812068..1814095 + 675 58581364 yoaA XOO1741 - ATP-dependent helicase 1571 70.11 +1 1814016..1814828 + 270 58581365 - XOO1742 - hypothetical protein 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.