version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1410 57.14 -1 1614785..1615120 + 111 121632076 - XOO4770 - putative ISXo8 transposase 1411 59.18 -1 1615622..1617130 - 502 58581203 rhsD XOO1580 - RhsD protein 1412 62.23 0 1617736..1618704 + 322 58581204 - XOO1581 - transposase 1413 62.62 0 1619550..1620932 - 460 58581205 - XOO1582 - putative ISXo8 transposase 1414 66.50 0 1620940..1621548 - 202 58581206 coaE XOO1583 - dephospho-CoA kinase 1415 62.50 0 1621562..1622425 - 287 58581207 pilD XOO1584 - type IV pre-pilin leader peptidase 1416 53.23 -2 1622432..1623637 - 401 122879113 pilC XOO1585 - fimbrial assembly protein 1417 58.97 -1 1623965..1624471 + 168 58581209 pilE XOO1586 - pilin 1418 61.54 0 1624537..1626195 + 552 58581210 - XOO1587 - putative integral membrane protein 1419 61.23 0 1626805..1628331 + 508 58581211 - XOO1588 - putative integral membrane protein 1420 61.07 0 1628312..1630099 + 595 58581212 pilB XOO1589 - pilus biogenesis protein 1421 54.12 -2 1630108..1630362 - 84 58581213 fic XOO1590 - cell filamentation protein Fic 1422 65.22 0 1630958..1632409 - 483 58581214 pilR XOO1591 - two-component system regulatory protein 1423 66.23 0 1632680..1634293 - 537 122879114 pilS XOO1592 - two-component system sensor protein 1424 61.62 0 1634527..1635696 + 389 58581216 sucC XOO1593 - succinyl-CoA synthetase subunit beta 1425 64.27 0 1635721..1636596 + 291 58581217 sucD XOO1594 - succinyl-CoA synthetase subunit alpha 1426 66.31 0 1637641..1639299 + 552 58581218 nadE XOO1595 - NAD synthetase 1427 62.93 0 1639457..1640338 - 293 58581219 comL XOO1596 - competence lipoprotein 1428 69.84 +1 1640447..1641454 + 335 58581220 rluD XOO1597 - ribosomal large subunit pseudouridine synthase D 1429 70.76 +1 1641462..1642268 + 268 58581221 - XOO1598 - hypothetical protein 1430 64.50 0 1642289..1642795 + 168 122879115 - XOO1599 - hypothetical protein 1431 64.04 0 1642770..1643150 + 126 58581223 - XOO1600 - hypothetical protein 1432 59.80 -1 1643074..1643175 + 33 121632077 - XOO4771 - hypothetical protein 1433 60.53 0 1643400..1644767 - 455 58581224 ostA XOO1601 - trehalose-6-phosphate synthase 1434 62.24 0 1644764..1646617 - 617 58581225 - XOO1602 - hypothetical protein 1435 66.67 0 1646587..1647351 - 254 58581226 ostB XOO1603 - trehalose-6-phosphate phosphatase 1436 64.46 0 1648663..1651197 - 844 58581227 bfeA XOO1604 - ferric enterobactin receptor 1437 67.61 +1 1651280..1651807 + 175 58581228 - XOO1605 - hypothetical protein 1438 62.90 0 1651903..1653150 - 415 58581229 - XOO1606 - hypothetical protein 1439 66.54 0 1653426..1655027 + 533 122879116 - XOO1607 - hypothetical protein 1440 55.10 -2 1655179..1655325 + 48 58581231 - XOO1608 - transposase 1441 65.56 0 1655332..1656594 - 420 58581232 - XOO1609 - hypothetical protein 1442 65.61 0 1656617..1657372 - 251 161899004 ate1 XOO1611 - arginyl-tRNA-protein transferase 1443 66.49 0 1657592..1658173 + 193 122879117 - XOO1610 - hypothetical protein 1444 55.14 -2 1658307..1658792 - 161 58581235 - XOO1612 - hypothetical protein 1445 66.79 0 1659017..1659796 - 259 58581236 rfaY XOO1613 - RNA polymerase sigma factor 1446 65.56 0 1659872..1660414 - 180 58581237 pthX XOO1614 - pathogenicity-related protein 1447 65.59 0 1660603..1661628 - 341 58581238 tesB XOO1615 - acyl-CoA thiolesterase II 1448 69.26 +1 1661579..1662349 - 256 58581239 - XOO1616 - hypothetical protein 1449 63.66 0 1662373..1662837 + 154 58581240 - XOO1617 - hypothetical protein 1450 61.73 0 1662951..1663355 - 134 58581241 - XOO1618 - hypothetical protein 1451 60.75 0 1666618..1666938 + 106 58581243 rplU XOO1620 - 50S ribosomal protein L21 1452 62.45 0 1666951..1667211 + 86 58581244 rpmA XOO1621 - 50S ribosomal protein L27 1453 65.05 0 1667444..1668496 + 350 58581245 obgE XOO1622 - GTPase ObgE 1454 60.37 0 1668588..1668857 - 89 58581246 rpsT XOO1623 - 30S ribosomal protein S20 1455 64.38 0 1668959..1670578 + 539 58581247 mviN XOO1624 - virulence factor 1456 65.33 0 1670597..1671793 + 398 58581248 ribF XOO1625 - bifunctional riboflavin kinase/FMN adenylyltransferase 1457 65.32 0 1671800..1674631 + 943 58581249 ileS XOO1626 - isoleucyl-tRNA synthetase 1458 63.45 0 1674826..1675446 + 206 58581250 lspA XOO1627 - lipoprotein signal peptidase 1459 65.51 0 1675535..1676485 + 316 161899003 ispH XOO1628 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1460 59.19 -1 1676999..1677934 + 311 122879118 cyoA XOO1629 - cytochrome O ubiquinol oxidase subunit II 1461 60.53 0 1677913..1679934 + 673 58581253 cyoB XOO1630 - cytochrome O ubiquinol oxidase subunit I 1462 61.77 0 1679931..1680563 + 210 58581254 cyoC XOO1631 - cytochrome O ubiquinol oxidase subunit III 1463 59.23 -1 1680563..1680898 + 111 58581255 cyoD XOO1632 - cytochrome O ubiquinol oxidase subunit IV 1464 62.25 0 1681248..1682945 + 565 122879119 - XOO1633 - hypothetical protein 1465 60.37 0 1683146..1685416 + 756 58581257 vrgS XOO1634 - hypothetical protein 1466 65.33 0 1685410..1687059 + 549 58581258 - XOO1635 - hypothetical protein 1467 63.99 0 1687203..1691342 + 1379 58581259 - XOO1636 - hypothetical protein 1468 65.51 0 1691386..1692423 + 345 58581260 - XOO1637 - putative transposase 1469 63.04 0 1693525..1696419 + 964 58581261 - XOO1638 - hypothetical protein 1470 63.57 0 1697689..1697817 + 42 121632078 - XOO4774 - hypothetical protein 1471 66.73 0 1697836..1700841 + 1001 58581262 - XOO1639 - hypothetical protein 1472 63.93 0 1700857..1701843 + 328 58581263 - XOO1640 - IS1404 transposase 1473 66.54 0 1701840..1703468 - 542 58581264 - XOO1641 - hypothetical protein 1474 64.95 0 1703725..1706346 - 873 58581265 mutS XOO1642 - DNA mismatch repair protein 1475 62.95 0 1707049..1707855 - 268 122879120 - XOO1643 - IS1404 transposase 1476 58.52 -1 1707887..1708156 - 89 58581268 - XOO1645 - IS1404 transposase 1477 64.40 0 1708175..1708615 + 146 58581269 - XOO1646 - putative ISXo8 transposase 1478 58.77 -1 1708644..1708871 + 75 58581270 - XOO1647 - putative ISXo8 transposase 1479 66.38 0 1709252..1710646 - 464 122879121 radA XOO1648 - DNA repair protein RadA 1480 66.45 0 1709252..1710643 - 463 121632079 radA XOO4776 - DNA repair protein RadA 1481 61.18 0 1710728..1711219 - 163 58581272 - XOO1649 - IS1404 transposase 1482 65.03 0 1711042..1711713 - 223 58581273 - XOO1650 - IS1404 transposase 1483 60.23 -1 1711566..1711829 - 87 121632080 - XOO4777 - IS1404 transposase 1484 64.61 0 1712034..1713590 + 518 121632081 - XOO4778 - hypothetical protein 1485 68.40 +1 1713854..1715005 - 383 58581274 plcN XOO1651 - phospholipase C 1486 66.02 0 1716174..1717412 - 412 122879122 ycaD XOO1653 - transmembrane transport protein 1487 66.45 0 1717679..1718146 + 155 58581277 - XOO1654 - hypothetical protein 1488 69.76 +1 1718644..1719420 - 258 58581278 - XOO1655 - hypothetical protein 1489 65.04 0 1719500..1721344 + 614 58581279 aspS XOO1656 - aspartyl-tRNA synthetase 1490 63.83 0 1721856..1722383 + 175 122879123 - XOO1657 - acetyltransferase 1491 71.50 +2 1722561..1723160 + 199 122879124 - XOO1658 - hypothetical protein 1492 66.39 0 1723250..1723978 + 242 58581282 - XOO1659 - hypothetical protein 1493 66.10 0 1724093..1724617 + 174 58581283 ruvC XOO1660 - Holliday junction resolvase 1494 66.84 0 1724775..1725359 + 194 161899002 ruvA XOO1661 - Holliday junction DNA helicase motor protein 1495 64.31 0 1725559..1727466 + 635 58581285 kup XOO1662 - potassium uptake protein 1496 65.90 0 1727595..1728632 + 345 58581286 ruvB XOO1663 - Holliday junction DNA helicase B 1497 63.18 0 1728685..1729143 + 152 58581287 - XOO1664 - hypothetical protein 1498 63.46 0 1729155..1729934 + 259 58581288 tolQ XOO1665 - hypothetical protein 1499 64.09 0 1729959..1730540 + 193 58581289 tolR XOO1666 - hypothetical protein 1500 67.24 0 1730530..1731570 + 346 58581290 tolA XOO1667 - hypothetical protein 1501 64.72 0 1731764..1733149 + 461 58581291 tolB XOO1668 - translocation protein TolB 1502 62.45 0 1733180..1733725 + 181 58581292 ompP6 XOO1669 - outer membrane protein P6 precursor 1503 62.15 0 1733732..1734550 + 272 58581293 - XOO1670 - hypothetical protein 1504 63.03 0 1734644..1735276 + 210 58581294 - XOO1671 - radical activating enzyme 1505 63.11 0 1735396..1736631 + 411 58581296 - XOO1673 - transposase 1506 63.03 0 1736713..1737948 + 411 58581298 - XOO1675 - transposase 1507 54.81 -2 1738343..1738789 - 148 58581300 - XOO1677 - transposase 1508 64.63 0 1738829..1740205 - 458 122879125 - XOO1678 - IS1478 transposase 1509 66.22 0 1740584..1741258 + 224 58581302 exsB XOO1679 - transcriptional regulator 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.