version 1.0
Xanthomonas oryzae pv. oryzae KACC10331, complete genome - 1..4941439 4144 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1329 64.22 0 1525256..1525828 + 190 58581104 creD XOO1481 - inner membrane protein 1330 48.39 -2 1527038..1527130 - 30 58581108 - XOO1485 - putative transposase 1331 64.56 0 1527183..1528082 - 299 58581109 - XOO1486 - putative transposase 1332 57.93 -1 1528170..1528982 - 270 122879107 - XOO1487 - cysteine protease 1333 56.99 -1 1532429..1532521 + 30 58581117 - XOO1494 - IS1479 transposase 1334 57.84 -1 1533035..1533340 - 101 58581120 - XOO1497 - cysteine protease 1335 62.37 0 1533445..1534002 + 185 58581121 - XOO1498 - hypothetical protein 1336 59.77 -1 1534095..1534355 + 86 58581123 nthA XOO1500 - nitrilase 1337 60.57 0 1534101..1534346 - 81 121632069 - XOO4761 - hypothetical protein 1338 62.33 0 1534330..1535298 - 322 58581124 - XOO1501 - transposase 1339 65.84 0 1535367..1536092 + 241 58581125 nthA XOO1502 - nitrilase 1340 65.60 0 1536114..1536674 + 186 121632070 - XOO4762 - hypothetical protein 1341 65.81 0 1536398..1537213 + 271 58581126 - XOO1503 - hypothetical protein 1342 64.67 0 1537282..1538685 + 467 58581127 gltX XOO1504 - glutamyl-tRNA synthetase 1343 66.10 0 1538672..1539205 + 177 58581128 - XOO1505 - FUR family transcriptional regulator 1344 66.67 0 1540847..1541050 + 67 121632071 - XOO4763 - hypothetical protein 1345 61.97 0 1541140..1542267 - 375 58581131 - XOO1508 - IS1478 transposase 1346 64.61 0 1542612..1543097 - 161 58581132 - XOO1509 - hypothetical protein 1347 56.02 -2 1543325..1543540 + 71 58581133 cspA XOO1510 - major cold shock protein 1348 66.10 0 1543791..1544321 - 176 58581134 pcp XOO1511 - peptidoglycan-associated outer membrane lipoprotein 1349 66.28 0 1544402..1544914 - 170 58581135 - XOO1512 - hypothetical protein 1350 64.86 0 1544903..1545733 + 276 58581136 moeB XOO1513 - molybdopterin biosynthesis protein 1351 68.10 +1 1545795..1546562 - 255 58581137 - XOO1514 - hypothetical protein 1352 63.89 0 1546562..1546777 - 71 58581138 - XOO1515 - hypothetical protein 1353 64.01 0 1546848..1547714 + 288 58581139 - XOO1516 - hypothetical protein 1354 65.90 0 1547860..1549035 + 391 58581140 gcdH XOO1517 - glutaryl-CoA dehydrogenase 1355 66.18 0 1549050..1549256 + 68 58581141 - XOO1518 - hypothetical protein 1356 67.00 0 1549735..1550328 + 197 121632072 - XOO4764 - hypothetical protein 1357 69.52 +1 1550793..1551143 + 116 58581145 - XOO1522 - hypothetical protein 1358 66.19 0 1551278..1551907 + 209 122879108 gst XOO1521 - glutathione S-transferase 1359 67.44 +1 1552073..1554013 + 646 122879109 - XOO1523 - asparagine synthase 1360 63.42 0 1554230..1554784 + 184 58581147 - XOO1524 - hypothetical protein 1361 61.68 0 1554853..1556436 + 527 58581148 dnaB XOO1525 - replicative DNA helicase 1362 64.33 0 1556503..1557957 + 484 58581149 phr XOO1526 - photolyase 1363 63.09 0 1558374..1559099 + 241 58581150 - XOO1527 - OmpA family protein 1364 58.15 -1 1559198..1559608 + 136 58581151 - XOO1528 - short chain dehydrogenase 1365 63.26 0 1559648..1560616 + 322 58581152 - XOO1529 - hypothetical protein 1366 63.32 0 1560860..1563280 - 806 58581153 fhuA XOO1530 - TonB-dependent receptor 1367 71.57 +2 1565447..1565650 - 67 58581155 phuR XOO1532 - outer membrane hemin receptor 1368 65.45 0 1565869..1566279 + 136 58581156 - XOO1533 - hypothetical protein 1369 63.91 0 1566363..1566761 + 132 58581157 - XOO1534 - hypothetical protein 1370 63.69 0 1566894..1567934 - 346 58581158 - XOO1535 - alcohol dehydrogenase 1371 66.53 0 1568007..1569452 - 481 58581159 yadQ XOO1536 - chloride channel 1372 63.03 0 1570728..1570892 + 54 121632073 - XOO4766 - hypothetical protein 1373 67.77 +1 1571142..1571687 - 181 58581161 ogt XOO1538 - 6-O-methylguanine-DNA methyltransferase 1374 70.49 +1 1571684..1573147 - 487 58581162 ada XOO1539 - DNA methylation and regulatory protein 1375 67.15 0 1573159..1574202 + 347 58581163 - XOO1540 - hypothetical protein 1376 69.54 +1 1574171..1574518 + 115 58581164 - XOO1541 - hypothetical protein 1377 66.67 0 1574597..1574851 + 84 58581165 - XOO1542 - hypothetical protein 1378 69.10 +1 1575254..1575787 + 177 58581166 - XOO1543 - hypothetical protein 1379 64.43 0 1575813..1576214 + 133 58581167 - XOO1544 - inner membrane protein 1380 63.79 0 1576560..1576802 - 80 58581168 - XOO1545 - hypothetical protein 1381 66.67 0 1576831..1577490 - 219 122879110 - XOO1546 - hypothetical protein 1382 63.35 0 1577520..1578062 - 180 58581171 rfaY XOO1548 - RNA polymerase ECF-type sigma factor 1383 65.87 0 1577798..1577923 - 41 58581172 rfaY XOO1549 - RNA polymerase ECF-type sigma factor 1384 67.03 0 1578167..1580071 + 634 58581173 deaD XOO1550 - ATP-dependent RNA helicase 1385 64.17 0 1580209..1582731 + 840 58581174 - XOO1551 - hypothetical protein 1386 63.07 0 1582881..1583603 + 240 58581175 - XOO1552 - pseudouridylate synthase 1387 65.85 0 1585117..1585728 - 203 58581177 - XOO1554 - hypothetical protein 1388 65.66 0 1585852..1585950 - 32 121632074 - XOO4768 - hypothetical protein 1389 67.86 +1 1586523..1587023 + 166 122879111 menG XOO1555 - ribonuclease activity regulator protein RraA 1390 63.77 0 1586953..1588641 + 562 58581179 - XOO1556 - beta-lactamase 1391 63.27 0 1588788..1590053 + 421 58581180 yjl094C XOO1557 - cation:proton antiporter 1392 66.83 0 1590112..1591305 - 397 58581181 baeS XOO1558 - two-component system sensor protein 1393 65.12 0 1591302..1593635 - 777 58581182 baeR XOO1559 - two-component system regulatory protein 1394 65.71 0 1591995..1593566 + 523 58581183 ttgF XOO1560 - outer membrane channel protein 1395 66.43 0 1593586..1594422 + 278 58581184 - XOO1561 - hypothetical protein 1396 69.66 +1 1594448..1595551 + 367 58581185 mexC XOO1562 - RND efflux membrane fusion protein 1397 66.27 0 1595548..1598607 + 1019 58581186 acr XOO1563 - acriflavin resistance protein 1398 65.14 0 1598673..1599263 + 196 58581187 - XOO1564 - hypothetical protein 1399 62.68 0 1599395..1601227 + 610 58581188 bapA XOO1565 - ABC transporter ATP-binding protein 1400 56.99 -1 1601303..1601881 - 192 122879112 - XOO1566 - transposase 1401 65.51 0 1601913..1602950 - 345 58581191 - XOO1568 - putative transposase 1402 52.78 -2 1602994..1603209 - 71 58581192 - XOO1569 - transposase 1403 63.11 0 1604285..1605520 + 411 58581195 - XOO1572 - transposase 1404 60.80 0 1605358..1605783 - 141 121632075 - XOO4769 - putative ISXo8 transposase 1405 63.48 0 1605788..1607011 - 407 58581196 - XOO1573 - ISxac1 transposase 1406 54.02 -2 1607027..1607287 - 86 58581197 - XOO1574 - putative ISXo8 transposase 1407 56.05 -2 1608522..1613012 + 1496 58581200 - XOO1577 - RhsD protein precursor 1408 61.20 0 1613552..1614520 + 322 58581201 - XOO1578 - putative transposase 1409 61.62 0 1614733..1614831 - 32 58581202 - XOO1579 - putative ISXo8 transposase 1410 57.14 -1 1614785..1615120 + 111 121632076 - XOO4770 - putative ISXo8 transposase 1411 59.18 -1 1615622..1617130 - 502 58581203 rhsD XOO1580 - RhsD protein 1412 62.23 0 1617736..1618704 + 322 58581204 - XOO1581 - transposase 1413 62.62 0 1619550..1620932 - 460 58581205 - XOO1582 - putative ISXo8 transposase 1414 66.50 0 1620940..1621548 - 202 58581206 coaE XOO1583 - dephospho-CoA kinase 1415 62.50 0 1621562..1622425 - 287 58581207 pilD XOO1584 - type IV pre-pilin leader peptidase 1416 53.23 -2 1622432..1623637 - 401 122879113 pilC XOO1585 - fimbrial assembly protein 1417 58.97 -1 1623965..1624471 + 168 58581209 pilE XOO1586 - pilin 1418 61.54 0 1624537..1626195 + 552 58581210 - XOO1587 - putative integral membrane protein 1419 61.23 0 1626805..1628331 + 508 58581211 - XOO1588 - putative integral membrane protein 1420 61.07 0 1628312..1630099 + 595 58581212 pilB XOO1589 - pilus biogenesis protein 1421 54.12 -2 1630108..1630362 - 84 58581213 fic XOO1590 - cell filamentation protein Fic 1422 65.22 0 1630958..1632409 - 483 58581214 pilR XOO1591 - two-component system regulatory protein 1423 66.23 0 1632680..1634293 - 537 122879114 pilS XOO1592 - two-component system sensor protein 1424 61.62 0 1634527..1635696 + 389 58581216 sucC XOO1593 - succinyl-CoA synthetase subunit beta 1425 64.27 0 1635721..1636596 + 291 58581217 sucD XOO1594 - succinyl-CoA synthetase subunit alpha 1426 66.31 0 1637641..1639299 + 552 58581218 nadE XOO1595 - NAD synthetase 1427 62.93 0 1639457..1640338 - 293 58581219 comL XOO1596 - competence lipoprotein 1428 69.84 +1 1640447..1641454 + 335 58581220 rluD XOO1597 - ribosomal large subunit pseudouridine synthase D 63.81 MEAN 3.50 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.