IslandPathversion 1.0

IslandPath Analysis: Wolbachia pipientis



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 34.35 STD DEV: 2.87
Wolbachia pipientis, complete genome - 1..1482455
1275 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
626	 38.53	+1	770509..770835	-	108	190571104	trx	WP0702	-	thioredoxin
627	 34.46	0	770915..771535	-	206	190571105	-	WP0703	-	3'-5' exonuclease
628	 39.00	+1	771870..772328	+	152	190571106	-	WP0704	-	hypothetical protein
629	 35.37	0	772370..773254	+	294	190571107	era	WP0705	-	GTP-binding protein Era
630	 34.18	0	773247..774074	+	275	190571108	-	WP0706	-	hypothetical protein
631	 33.55	0	774117..775022	-	301	190571109	-	WP0707	-	putative lipase
632	 33.33	0	775099..775431	-	110	190571110	-	WP0708	-	hypothetical protein
633	 36.19	0	775763..777826	+	687	190571111	-	WP0709	-	Putative outer membrane protein
634	 39.58	+1	777947..778138	-	63	190571112	-	WP0710	-	hypothetical protein
635	 32.05	0	778142..778999	+	285	190571113	-	WP0711	-	hypothetical protein
636	 34.76	0	779472..779681	+	69	190571114	-	WP0712	-	hypothetical protein
637	 35.40	0	779662..779952	+	96	190571115	-	WP0713	-	hypothetical protein
638	 32.70	0	780234..780392	-	52	190571116	-	WP0714	-	hypothetical protein
639	 33.81	0	780530..780946	+	138	190571117	-	WP0715	-	Hypotehtical protein
640	 36.05	0	780943..781788	-	281	190571118	-	WP0716	-	rhodanese domain protein
641	 33.40	0	781919..783517	+	532	190571119	-	WP0717	-	iron compound ABC transporter, permease protein
642	 32.59	0	783720..784124	-	134	190571120	-	WP0718	-	apaG protein
643	 35.09	0	784228..785307	+	359	190571121	purK	WP0719	-	phosphoribosylaminoimidazole carboxylase, ATPase subunit
644	 36.17	0	785309..786331	-	340	190571122	asd	WP0720	-	aspartate-semialdehyde dehydrogenase
645	 30.52	-1	786470..786895	+	141	190571123	-	WP0721	-	hypothetical protein
646	 37.30	+1	786924..788210	-	428	190571124	-	WP0722	-	amino acid permease family protein
647	 36.31	0	788281..789555	-	424	190571125	-	WP0723	-	amino acid permease family protein
648	 33.12	0	789694..791133	+	479	190571126	-	WP0724	-	hypothetical protein
649	 33.85	0	791235..792005	+	256	190571127	surE	WP0725	-	acid phosphatase SurE
650	 34.64	0	792002..793225	-	407	190571128	hisS	WP0726	-	histidyl-tRNA synthetase
651	 33.86	0	793222..793794	-	190	190571129	-	WP0727	-	NifU domain protein
652	 33.61	0	793856..794215	+	119	190571130	-	WP0728	-	DnaJ domain protein
653	 33.42	0	794243..795388	+	381	190571131	-	WP0729	-	ankyrin repeat domain protein
654	 35.92	0	795573..796691	+	372	190571132	-	WP0730	-	ankyrin repeat domain protein
655	 33.85	0	796949..798118	+	389	190571133	-	WP0731	-	ankyrin repeat domain protein
656	 35.51	0	798463..799335	+	290	190571134	-	WP0732	-	transposase
657	 35.62	0	799362..800543	+	393	190571135	-	WP0733	-	ankyrin repeat domain protein
658	 34.64	0	800666..801892	+	408	190571136	petB	WP0734	-	ubiquinol-cytochrome c reductase, cytochrome b
659	 37.40	+1	801892..802653	+	253	190571137	petC	WP0735	-	ubiquinol-cytochrome c reductase, cytochrome c1
660	 36.28	0	802739..804673	+	644	190571138	uvrB	WP0736	-	excinuclease ABC, B subunit
661	 33.42	0	804980..806176	+	398	190571139	-	WP0737	-	major facilitator family transporter
662	 31.00	-1	806215..806514	+	99	190571140	-	WP0738	-	DNA-binding protein, HU family
663	 28.44	-2	806511..806837	+	108	190571141	-	WP0739	-	Putative transcriptional regulator, MerR family
664	 35.03	0	806890..807480	+	196	190571142	nlpD	WP0740	-	Putative Lipoprotein
665	 36.34	0	807485..809944	+	819	190571143	leuS	WP0741	-	leucyl-tRNA synthetase
666	 36.82	0	810065..810724	+	219	190571144	-	WP0742	-	ompA-like protein
667	 35.77	0	810835..811572	+	245	190571145	-	WP0743	-	ompA-like protein
668	 34.68	0	811672..812559	-	295	190571146	folD	WP0744	-	methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
669	 34.90	0	812543..813118	-	191	190571147	ubiX	WP0745	-	phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
670	 35.27	0	813111..813368	-	85	190571148	-	WP0746	-	hypothetical protein
671	 32.71	0	813378..814655	-	425	190571149	-	WP0747	-	Putative CBS domain membrane protein
672	 36.47	0	814724..815902	-	392	190571150	argD	WP0748	-	acetylornithine aminotransferase
673	 34.29	0	816025..816444	-	139	190571151	ndk	WP0749	-	nucleoside diphosphate kinase
674	 35.17	0	816550..817311	+	253	190571152	-	WP0750	-	hypothetical protein
675	 35.43	0	817308..818261	+	317	190571153	hemH	WP0751	-	ferrochelatase
676	 32.18	0	818323..819186	+	287	190571154	-	WP0752	-	hypothetical protein
677	 32.82	0	819174..820331	-	385	190571155	-	WP0753	-	glutamate--cysteine ligase-related protein
678	 38.74	+1	820414..820968	+	184	190571156	hslV	WP0754	-	heat shock protein HslV
679	 35.06	0	820970..822421	+	483	190571157	hslU	WP0755	-	heat shock protein HslVU, ATPase subunit HslU
680	 32.31	0	822492..823373	-	293	190571158	-	WP0756	-	peptidyl-prolyl cis-trans isomerase
681	 35.89	0	823366..824148	-	260	190571159	ispA	WP0757	-	geranyltranstransferase
682	 34.48	0	824276..824536	+	86	190571160	acpP	WP0758	-	acyl carrier protein
683	 39.98	+1	824543..825805	+	420	190571161	fabF	WP0759	-	3-oxoacyl-(acyl-carrier-protein) synthase II
684	 35.68	0	826361..827638	+	425	190571162	murA	WP0760	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
685	 34.16	0	827648..828490	+	280	190571163	thyX	WP0761	-	Thymidylate synthase thyX
686	 29.50	-1	828515..829687	-	390	190571164	-	WP0762	-	hypothetical protein
687	 34.92	0	830067..833477	-	1136	190571165	-	WP0763	-	ankyrin repeat domain protein
688	 33.75	0	833487..834455	-	322	190571166	-	WP0764	-	hypothetical protein
689	 33.94	0	834600..836246	-	548	190571167	-	WP0765	-	hypothetical protein
690	 36.54	0	836345..838309	+	654	190571168	priA	WP0766	-	primosomal protein N
691	 31.94	0	838433..839221	+	262	190571169	-	WP0767	-	ankyrin repeat domain protein
692	 31.75	0	839780..841168	+	462	190571170	-	WP0768	-	Ankyrin repeat domain protein
693	 35.86	0	841295..841888	+	197	190571171	recR	WP0769	-	recombination protein RecR
694	 28.62	-1	842007..843089	+	360	190571172	-	WP0770	-	hypothetical protein
695	 32.10	0	843145..844365	+	406	190571173	-	WP0771	-	hypothetical protein
696	 36.15	0	844512..846428	+	638	190571174	htpG	WP0772	-	heat shock protein HtpG
697	 35.46	0	846467..847972	+	501	190571175	-	WP0773	-	hypothetical protein
698	 35.14	0	847978..849642	+	554	190571176	-	WP0774	-	ankyrin repeat domain protein
699	 33.74	0	849793..850284	+	163	190571177	-	WP0775	-	hypothetical protein
700	 35.42	0	850309..851169	+	286	190571178	-	WP0776	-	Ankyrin repeat domain protein
701	 36.98	0	851214..851624	+	136	190571179	-	WP0777	-	hypothetical protein
702	 37.18	0	851689..852885	+	398	190571180	hemA	WP0778	-	5-aminolevulinic acid synthase
703	 37.09	0	853166..853858	-	230	190571181	-	WP0779	-	inositol monophosphatase family protein
704	 34.92	0	853859..854425	-	188	190571182	efp	WP0780	-	translation elongation factor P
705	 30.54	-1	854485..854985	-	166	190571183	rimM	WP0781	-	16S rRNA processing protein RimM
706	 33.83	0	855083..858733	+	1216	190571184	-	WP0782	-	hypothetical protein
707	 35.81	0	858730..859899	-	389	190571185	argD	WP0783	-	acetylornithine aminotransferase
708	 28.71	-1	859964..861391	+	475	190571186	-	WP0784	-	sensor histidine kinase
709	 31.30	-1	861568..862305	+	245	190571187	-	WP0785	-	hypothetical protein
710	 37.49	+1	862378..863388	+	336	190571188	-	WP0786	-	peptidase, M22 family protein
711	 31.45	-1	863452..865899	+	815	190571189	-	WP0787	-	ankyrin repeat domain protein
712	 33.16	0	866001..867125	+	374	190571190	-	WP0788	-	hypothetical protein
713	 37.97	+1	867410..869155	+	581	190571191	-	WP0789	-	type I secretion system ATPase
714	 34.78	0	869255..870016	-	253	190571192	-	WP0790	-	hypothetical protein
715	 35.47	0	870074..871336	-	420	190571193	aceF	WP0791	-	pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase
716	 33.33	0	871431..871586	+	51	190571194	-	WP0792	-	hypothetical protein
717	 32.73	0	871621..872115	-	164	190571195	-	WP0793	-	hypothetical protein
718	 35.67	0	872362..873303	+	313	190571196	-	WP0794	-	hypothetical protein
719	 37.16	0	873428..875257	-	609	190571197	ftsH	WP0795	-	cell division protein FtsH
720	 32.02	0	875270..876562	-	430	190571198	tilS	WP0796	-	trna(ile)-lysidine synthase (ec 6.3.4.-) (trna(ile)-lysidine synthetase) (trna(ile)-2-lysyl-cytidine synthase)
721	 34.38	0	876705..877184	-	159	190571199	-	WP0797	-	peptidoglycan-associated lipoprotein, putative
722	 31.22	-1	877459..878877	+	472	190571200	-	WP0798	-	Putative thermostable carboxypeptidase 1
723	 37.83	+1	878898..879965	+	355	190571201	mreB	WP0799	-	rod shape-determining protein MreB
724	 38.66	+1	880185..881291	+	368	190571202	trmU	WP0800	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
725	 29.41	-1	881404..882702	+	432	190571203	-	WP0801	-	hypothetical protein
34.35	MEAN

2.87	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.