IslandPath Analysis: Wolbachia pipientis



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 34.35   STD DEV: 2.87
Wolbachia pipientis, complete genome - 1..1482455
1275 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
160	 35.51	0	188943..189815	+	290	190570638	-	WP0180	-	transposase
161	 31.72	0	189936..191234	-	432	190570639	-	WP0181	-	Putative Na+/H+ antiporter
162	 34.95	0	191333..193066	-	577	190570640	dnaG	WP0182	-	DNA primase
163	 36.68	0	193212..194378	+	388	190570641	-	WP0183	-	3-demethylubiquinone-9 3-methyltransferase/sugar-phosphate isomerase family protein
164	 32.80	0	194486..195616	+	376	190570642	-	WP0184	-	hypothetical protein
165	 34.65	0	195616..196221	+	201	190570643	-	WP0185	-	Putative glycoprotease
166	 28.36	-2	196191..196673	-	160	190570644	-	WP0186	-	hypothetical protein
167	 33.47	0	197012..197722	+	236	190570645	-	WP0187	-	class II aldolase/adducin domain protein
168	 28.86	-1	198811..199458	-	215	190570646	ccmB	WP0190	-	heme exporter protein CcmB
169	 30.95	-1	199567..199944	+	125	190570647	-	WP0191	-	Putative dnaK suppressor protein
170	 31.77	0	201722..202936	-	404	190570648	-	WP0195	-	Ankyrin repeat domain protein
171	 37.55	+1	203187..204467	-	426	190570649	ispG	WP0196	-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
172	 34.44	0	204484..205113	-	209	190570650	-	WP0197	-	hypothetical protein
173	 36.02	0	205290..205847	-	185	190570651	-	WP0198	-	hypothetical protein
174	 37.36	+1	206029..208140	-	703	190570652	-	WP0199	-	Putative cell division protein FtsK
175	 29.75	-1	208141..208419	-	92	190570653	-	WP0200	-	YGGT family protein
176	 30.77	-1	209992..210420	-	142	190570654	-	WP0202	-	hypothetical protein
177	 39.36	+1	210515..210763	+	82	190570655	-	WP0203	-	hypothetical protein
178	 35.50	0	211223..212236	-	337	190570656	-	WP0204	-	GTP-binding protein, GTP1/OBG family
179	 37.49	+1	212224..213498	-	424	190570657	eno	WP0205	-	enolase
180	 41.58	+2	213495..213797	-	100	190570658	-	WP0206	-	hypothetical protein
181	 35.60	0	213819..214787	-	322	190570659	-	WP0207	-	murC-like protein
182	 31.37	-1	214827..215438	-	203	190570660	-	WP0208	-	SURF1 family protein
183	 32.08	0	215440..215916	-	158	190570661	bfr	WP0209	-	bacterioferritin
184	 32.28	0	215970..216443	-	157	190570662	-	WP0210	-	hypothetical protein
185	 33.96	0	216443..217084	-	213	190570663	-	WP0211	-	haloacid dehalogenase-like hydrolase
186	 32.41	0	217228..218412	+	394	190570664	-	WP0212	-	hypothetical protein
187	 35.51	0	220492..221364	-	290	190570665	-	WP0215	-	transposase
188	 38.37	+1	221716..223104	-	462	190570666	fumC	WP0216	-	fumarate hydratase, class II
189	 35.07	0	223297..224046	-	249	190570667	-	WP0217	-	Ankyrin repeat domain protein
190	 35.36	0	224107..224748	-	213	190570668	-	WP0218	-	Ankyrin repeat domain protein
191	 34.16	0	224918..227716	-	932	190570669	-	WP0219	-	hypothetical protein
192	 38.59	+1	227825..230884	+	1019	190570670	-	WP0220	-	phosphoribosylformylglycinamidine synthase II domain protein
193	 29.82	-1	230962..231474	+	170	190570671	-	WP0221	-	hypothetical protein
194	 38.34	+1	231897..233015	+	372	190570672	dnaJ	WP0222	-	dnaJ protein
195	 37.31	+1	233185..234819	+	544	190570673	-	WP0223	-	metallo-beta-lactamase family protein
196	 38.51	+1	234866..235213	+	115	190570674	-	WP0224	-	hypothetical protein
197	 32.06	0	235266..236522	+	418	190570675	tolB	WP0225	-	Protein tolB precursor
198	 32.20	0	236561..236914	-	117	190570676	gatC	WP0226	-	glutamyl-tRNA(Gln) amidotransferase, C subunit
199	 35.18	0	236904..237824	-	306	190570677	prsA	WP0227	-	ribose-phosphate pyrophosphokinase
200	 32.68	0	238111..240111	+	666	190570678	-	WP0228	-	AAA ATPase family protein
201	 38.37	+1	240458..242422	-	654	190570679	tkt	WP0229	-	transketolase
202	 35.28	0	242536..243150	+	204	190570680	rpsD	WP0230	-	ribosomal protein S4
203	 29.74	-1	243268..243462	+	64	190570681	-	WP0231	-	hypothetical protein
204	 31.95	0	243749..244183	+	144	190570682	-	WP0232	-	Putative lipoprotein protein
205	 31.17	-1	244193..244516	+	107	190570683	-	WP0233	-	hypothetical protein
206	 30.79	-1	244571..244885	+	104	190570684	rpmB	WP0234	-	ribosomal protein L28
207	 37.11	0	244878..245750	+	290	190570685	lipA	WP0235	-	lipoic acid synthetase
208	 35.51	0	246045..246917	+	290	190570686	-	WP0236	-	transposase
209	 32.14	0	247653..248570	-	305	190570687	-	WP0239	-	Putative transcriptional regulator
210	 33.89	0	248691..249584	+	297	190570688	-	WP0240	-	hypothetical protein
211	 33.16	0	249946..250506	-	186	190570689	-	WP0241	-	hypothetical protein
212	 33.33	0	250652..250819	-	55	190570690	-	WP0242	-	Putative phage related protein (fragment)
213	 35.86	0	250819..251610	-	263	190570691	-	WP0243	-	baseplate assembly protein GpJ
214	 32.74	0	251613..251948	-	111	190570692	-	WP0244	-	Baseplate assembly protein GpW
215	 37.25	+1	251951..252205	-	84	190570693	-	WP0245	-	Putative phage related protein
216	 33.98	0	252205..252669	-	154	190570694	-	WP0246	-	baseplate assembly protein GpV
217	 37.11	0	252656..253132	-	158	190570695	-	WP0247	-	Putative phage related protein
218	 33.53	0	253129..253626	-	165	190570696	-	WP0248	-	Puative minor tail protein z
219	 37.91	+1	253628..253933	-	101	190570697	-	WP0249	-	Putative phage related protein
220	 39.00	+1	254031..255035	-	334	190570698	-	WP0250	-	Putative phage related protein
221	 38.71	+1	255061..255432	-	123	190570699	-	WP0251	-	Putative phage related protein
222	 34.38	0	255574..256620	-	348	190570700	-	WP0252	-	Putative minor capsid protein c
223	 38.90	+1	256620..258038	-	472	190570701	-	WP0253	-	Putative phage portal protein
224	 34.22	0	258039..258263	-	74	190570702	-	WP0254	-	Putative phage related protein
225	 39.81	+1	258253..260088	-	611	190570703	-	WP0255	-	Phage terminase large subunit GpA
226	 34.01	0	260088..261560	-	490	190570704	-	WP0256	-	Ankyrin repeat domain protein
227	 34.80	0	261568..262044	-	158	190570705	-	WP0257	-	Putative phage related protein
228	 37.39	+1	262041..263273	-	410	190570706	-	WP0258	-	Phage related DNA methylase
229	 36.77	0	263387..263851	-	154	190570707	-	WP0259	-	Putative phage related protein
230	 35.80	0	264507..265358	-	283	190570708	-	WP0260	-	Putative phage related protein
231	 32.42	0	265428..266846	-	472	190570709	-	WP0261	-	Putative phage related ATPase
232	 35.70	0	267301..268692	-	463	190570710	-	WP0262	-	Putative transposase
233	 32.12	0	271517..272011	+	164	190570711	-	WP0264	-	RNA polymerase sigma-70 domain protein
234	 39.75	+1	272066..272875	+	269	190570712	-	WP0265	-	Putative phage related protein
235	 36.68	0	272910..273716	+	268	190570713	-	WP0266	-	Putative phage related protein
236	 34.76	0	273751..274242	+	163	190570714	-	WP0267	-	Putative phage related protein
237	 35.17	0	274390..274770	+	126	190570715	-	WP0268	-	Putative transposase
238	 35.20	0	274767..275249	+	160	190570716	-	WP0269	-	putative transposase
239	 31.37	-1	275265..275468	+	67	190570717	-	WP0270	-	hypothetical protein
240	 33.14	0	275469..275975	-	168	190570718	-	WP0271	-	Putative endonuclease
241	 35.06	0	275981..276904	+	307	190570719	-	WP0272	-	patatin family protein
242	 31.43	-1	277056..277895	-	279	190570720	-	WP0273	-	Putative transcriptional regulator
243	 33.11	0	277921..278835	-	304	190570721	-	WP0274	-	Putative transcriptional regulator
244	 35.26	0	278914..280107	-	397	190570722	-	WP0275	-	hypothetical protein
245	 36.07	0	280207..280863	-	218	190570723	-	WP0276	-	Putative dna repair protein radc
246	 30.29	-1	281034..281954	-	306	190570724	-	WP0277	-	Putative transcriptional regulator
247	 35.82	0	282022..283830	-	602	190570725	mutL	WP0278	-	DNA mismatch repair protein MutL
248	 36.52	0	283821..284354	-	177	190570726	rnhA	WP0279	-	ribonuclease h
249	 39.66	+1	284961..286304	-	447	190570727	-	WP0280	-	putative reverse transcriptase
250	 35.91	0	287774..289249	+	491	190570728	-	WP0282	-	hypothetical protein
251	 36.17	0	289303..292827	+	1174	190570729	-	WP0283	-	hypothetical protein
252	 32.76	0	293401..293919	+	172	190570730	-	WP0284	-	Putative transposase
253	 34.31	0	293993..294403	+	136	190570731	-	WP0285	-	Putative transposase (fragment)
254	 33.33	0	294562..294741	+	59	190570732	-	WP0286	-	transposase (fragment)
255	 35.86	0	296912..297466	-	184	190570733	-	WP0290	-	Putative transcriptional regulator
256	 33.87	0	297580..298512	+	310	190570734	-	WP0291	-	hypothetical protein
257	 33.14	0	298496..306742	-	2748	190570735	-	WP0292	-	Ankyrin repeat domain protein
258	 32.06	0	306739..312651	-	1970	190570736	-	WP0293	-	Ankyrin repeat domain protein
259	 31.17	-1	313400..314737	+	445	190570737	-	WP0294	-	hypothetical protein
34.35	MEAN

2.87	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.