IslandPath Analysis: Wolbachia pipientis



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 34.35   STD DEV: 2.87
Wolbachia pipientis, complete genome - 1..1482455
1275 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1152	 32.69	0	1326874..1327959	+	361	190571630	ribA	WP1254	-	GTP cyclohydrolase II
1153	 28.93	-1	1328032..1328712	+	226	190571631	-	WP1255	-	type IV secretion system protein VirB8
1154	 29.06	-1	1328696..1329490	+	264	190571632	-	WP1256	-	type IV secretion system protein VirB9
1155	 36.77	0	1329507..1331018	+	503	190571633	-	WP1257	-	type IV secretion system protein VirB10
1156	 35.85	0	1331020..1332012	+	330	190571634	-	WP1258	-	type IV secretion system protein VirB11
1157	 36.75	0	1332043..1334061	+	672	190571635	-	WP1259	-	type IV secretion system protein VirD4
1158	 39.47	+1	1334630..1335868	-	412	190571636	-	WP1261	-	transposase
1159	 36.52	0	1336502..1338952	-	816	190571637	topA	WP1262	-	DNA topoisomerase I
1160	 29.47	-1	1339042..1339248	+	68	190571638	-	WP1263	-	hypothetical protein
1161	 34.28	0	1339601..1340872	+	423	190571639	-	WP1264	-	major facilitator family transporter
1162	 36.81	0	1340930..1342282	+	450	190571640	radA	WP1265	-	DNA repair protein RadA
1163	 27.72	-2	1342390..1342674	-	94	190571641	-	WP1266	-	hypothetical protein
1164	 37.61	+1	1343304..1344215	-	303	190571642	ftsY	WP1267	-	signal recognition particle protein FtsY
1165	 33.07	0	1344393..1344776	+	127	190571643	-	WP1268	-	NifU domain protein
1166	 34.88	0	1344782..1345168	+	128	190571644	-	WP1269	-	HesB/YadR/YfhF family protein
1167	 32.46	0	1345161..1345619	+	152	190571645	hscB	WP1270	-	co-chaperone Hsc20
1168	 35.72	0	1345597..1347483	+	628	190571646	hscA	WP1271	-	chaperone protein HscA
1169	 32.95	0	1347487..1348272	-	261	190571647	lepB	WP1272	-	signal peptidase I
1170	 36.97	0	1348472..1348828	+	118	190571648	-	WP1273	-	Putaive membrane protein
1171	 40.94	+2	1348831..1349829	-	332	190571649	-	WP1274	-	pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase beta subunit
1172	 33.95	0	1349890..1351191	-	433	190571650	-	WP1275	-	ankyrin repeat domain protein
1173	 36.99	0	1351517..1354330	+	937	190571651	uvrA	WP1276	-	excinuclease ABC, A subunit
1174	 30.78	-1	1354382..1355086	+	234	190571652	comF	WP1277	-	competence protein f
1175	 31.25	-1	1355460..1355651	-	63	190571653	-	WP1278	-	hypothetical protein
1176	 34.02	0	1355965..1357122	+	385	190571654	-	WP1279	-	ankyrin repeat domain protein
1177	 34.08	0	1357428..1358765	+	445	190571655	-	WP1280	-	ATPase, AAA family
1178	 43.43	+2	1358979..1359176	-	65	190571656	-	WP1281	-	hypothetical protein
1179	 31.57	0	1362545..1363738	+	397	190571657	-	WP1283	-	hypothetical protein
1180	 32.67	0	1363843..1364748	+	301	190571658	-	WP1284	-	hypothetical protein
1181	 35.51	0	1364998..1365870	-	290	190571659	-	WP1285	-	transposase
1182	 32.99	0	1366044..1367192	+	382	190571660	-	WP1286	-	hypothetical protein
1183	 30.55	-1	1367298..1368122	+	274	190571661	-	WP1287	-	hypothetical protein
1184	 32.00	0	1368243..1369070	+	275	190571662	-	WP1288	-	hypothetical protein
1185	 35.51	0	1369259..1370131	-	290	190571663	-	WP1289	-	transposase
1186	 28.68	-1	1370322..1370450	+	42	190571664	-	WP1290	-	hypothetical protein
1187	 35.78	0	1371265..1372326	-	353	190571665	-	WP1291	-	hypothetical protein
1188	 42.02	+2	1372485..1372841	+	118	190571666	-	WP1292	-	hypothetical protein
1189	 33.13	0	1373737..1375719	+	660	190571667	-	WP1293	-	ankyrin repeat domain protein
1190	 34.39	0	1376656..1377126	-	156	190571668	-	WP1295	-	hypothetical protein
1191	 34.12	0	1377110..1377364	-	84	190571669	-	WP1296	-	Putative phage related protein
1192	 33.12	0	1377364..1377828	-	154	190571670	-	WP1297	-	baseplate assembly protein GpV
1193	 37.53	+1	1377815..1378291	-	158	190571671	-	WP1298	-	Putative phage related protein
1194	 32.11	0	1378288..1378779	-	163	190571672	-	WP1299	-	Putative minor tail protein z
1195	 35.29	0	1378781..1379086	-	101	190571673	-	WP1300	-	Putative phage related protein
1196	 38.81	+1	1379161..1380165	-	334	190571674	-	WP1301	-	Putative phage related protein
1197	 39.78	+1	1380191..1380562	-	123	190571675	-	WP1302	-	putative phage related protein
1198	 36.32	0	1380688..1381725	-	345	190571676	-	WP1303	-	Putative minor capsid protein c
1199	 38.57	+1	1381740..1383152	-	470	190571677	-	WP1304	-	Putative phage portal protein
1200	 33.72	0	1383152..1384183	-	343	190571678	-	WP1305	-	phage uncharacterized protein
1201	 35.56	0	1384210..1384434	-	74	190571679	-	WP1306	-	putative phage related protein
1202	 39.81	+1	1384424..1386259	-	611	190571680	-	WP1307	-	Phage terminase large subunit GpA
1203	 34.01	0	1386259..1387731	-	490	190571681	-	WP1308	-	ankyrin repeat domain protein
1204	 34.80	0	1387739..1388215	-	158	190571682	-	WP1309	-	Putative phage related protein
1205	 37.39	+1	1388212..1389444	-	410	190571683	-	WP1310	-	Phage related DNA methylase
1206	 36.77	0	1389558..1390022	-	154	190571684	-	WP1311	-	putative phage related protein
1207	 37.04	0	1390240..1392399	+	719	190571685	-	WP1312	-	putative phage related protein
1208	 22.22	-2	1392768..1393010	-	80	190571686	-	WP1313	-	Putative phage related protein
1209	 32.95	0	1393753..1394277	+	174	190571687	-	WP1314	-	putative phage related protein
1210	 37.58	+1	1394338..1395162	+	274	190571688	-	WP1315	-	putative phage related protein
1211	 36.93	0	1395179..1395985	+	268	190571689	-	WP1316	-	putative phage related protein
1212	 36.33	0	1396025..1396525	+	166	190571690	-	WP1317	-	putative phage related protein
1213	 32.76	0	1396568..1398316	+	582	190571691	-	WP1318	-	putative phage related protein
1214	 32.45	0	1398323..1399459	-	378	190571692	-	WP1319	-	putative phage related protein
1215	 31.60	0	1399401..1400612	-	403	190571693	-	WP1320	-	putative phage related protein
1216	 38.45	+1	1400753..1401436	+	227	190571694	-	WP1321	-	putative phage related protein
1217	 37.02	0	1401443..1403368	+	641	190571695	-	WP1322	-	putative phage related protein
1218	 37.05	0	1403373..1404557	+	394	190571696	-	WP1323	-	Putative phage related protein
1219	 30.77	-1	1404562..1404756	+	64	190571697	-	WP1324	-	Putative phage related protein
1220	 35.44	0	1404753..1406126	+	457	190571698	-	WP1325	-	Putative phage related protein
1221	 32.61	0	1406149..1406700	+	183	190571699	-	WP1326	-	Putative phage related protein
1222	 37.32	+1	1406693..1407871	+	392	190571700	-	WP1327	-	Phage major tail sheath protein
1223	 36.49	0	1407887..1408393	+	168	190571701	-	WP1328	-	phage tail tube protein
1224	 34.75	0	1408639..1408920	+	93	190571702	-	WP1330	-	Putative phage related protein
1225	 34.50	0	1409004..1409261	+	85	190571703	-	WP1331	-	putative phage related protein
1226	 36.36	0	1409258..1409389	+	43	190571704	-	WP1332	-	Putative phage related protein
1227	 35.03	0	1409371..1411662	+	763	190571705	-	WP1333	-	phage tail tape measure protein
1228	 31.90	0	1411662..1412009	+	115	190571706	-	WP1334	-	phage tail protein GpU
1229	 34.29	0	1412006..1412215	+	69	190571707	-	WP1335	-	phage tail protein GpX
1230	 34.29	0	1412216..1413160	+	314	190571708	-	WP1336	-	phage late control gene d protein GpD
1231	 31.98	0	1413213..1413731	+	172	190571709	-	WP1337	-	ankyrin repeat domain protein
1232	 31.51	0	1413779..1413997	+	72	190571710	-	WP1338	-	hypothetical protein
1233	 35.73	0	1413880..1414506	-	208	190571711	-	WP1339	-	Putative endonuclease
1234	 35.50	0	1414493..1415413	+	306	190571712	-	WP1340	-	patatin family protein
1235	 33.03	0	1415480..1416457	-	325	190571713	-	WP1341	-	putative transcriptional regulator
1236	 35.10	0	1416521..1417762	-	413	190571714	-	WP1342	-	hypothetical protein
1237	 37.52	+1	1418058..1418726	-	222	190571715	-	WP1343	-	Putative dna repair protein radc
1238	 33.88	0	1419930..1420850	+	306	190571716	-	WP1345	-	hypothetical protein
1239	 34.92	0	1420834..1432482	-	3882	190571717	-	WP1346	-	hypothetical protein
1240	 34.81	0	1432713..1433660	-	315	190571718	-	WP1347	-	transposase
1241	 32.91	0	1433864..1434331	-	155	190571719	-	WP1348	-	hypothetical protein
1242	 33.71	0	1434391..1439217	-	1608	190571720	-	WP1349	-	hypothetical protein
1243	 35.51	0	1439977..1440849	+	290	190571721	-	WP1350	-	transposase
1244	 32.68	0	1440906..1444592	+	1228	190571722	-	WP1351	-	Ankyrin repeat domain protein
1245	 33.81	0	1444948..1445370	-	140	190571723	-	WP1352	-	transposase (fragment)
1246	 33.33	0	1445445..1445624	-	59	190571724	-	WP1353	-	transposase (fragment)
1247	 30.22	-1	1445996..1446799	+	267	190571725	-	WP1354	-	hypothetical protein
1248	 34.19	0	1446900..1448060	+	386	190571726	-	WP1355	-	Putaive outer membrane protein
1249	 36.02	0	1448334..1449674	+	446	190571727	-	WP1356	-	dna recombination protein rmuc homolog
1250	 32.61	0	1449707..1450813	-	368	190571728	-	WP1357	-	D-alanyl-D-alanine carboxypeptidase
1251	 39.43	+1	1451832..1453061	+	410	190571729	-	WP1359	-	transposase
34.35	MEAN

2.87	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.